{"id":"https://openalex.org/W2087566582","doi":"https://doi.org/10.1145/2147805.2147870","title":"Human gene/protein synonym dictionary from WikiLinks","display_name":"Human gene/protein synonym dictionary from WikiLinks","publication_year":2011,"publication_date":"2011-08-01","ids":{"openalex":"https://openalex.org/W2087566582","doi":"https://doi.org/10.1145/2147805.2147870","mag":"2087566582"},"language":"en","primary_location":{"id":"doi:10.1145/2147805.2147870","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2147805.2147870","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 2nd ACM Conference on Bioinformatics, Computational Biology and Biomedicine","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5041082275","display_name":"Kavishwar B. Wagholikar","orcid":"https://orcid.org/0000-0002-6219-861X"},"institutions":[{"id":"https://openalex.org/I184565670","display_name":"Georgetown University","ror":"https://ror.org/05vzafd60","country_code":"US","type":"education","lineage":["https://openalex.org/I184565670"]},{"id":"https://openalex.org/I2799903593","display_name":"Georgetown University Medical Center","ror":"https://ror.org/00hjz7x27","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I2799903593"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Kavishwar Wagholikar","raw_affiliation_strings":["Georgetown University Medical Center, Washington, DC"],"affiliations":[{"raw_affiliation_string":"Georgetown University Medical Center, Washington, DC","institution_ids":["https://openalex.org/I2799903593","https://openalex.org/I184565670"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028161578","display_name":"Manabu Torii","orcid":"https://orcid.org/0000-0002-4825-0696"},"institutions":[{"id":"https://openalex.org/I2799903593","display_name":"Georgetown University Medical Center","ror":"https://ror.org/00hjz7x27","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I2799903593"]},{"id":"https://openalex.org/I184565670","display_name":"Georgetown University","ror":"https://ror.org/05vzafd60","country_code":"US","type":"education","lineage":["https://openalex.org/I184565670"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Manabu Torii","raw_affiliation_strings":["Georgetown University Medical Center, Washington, DC"],"affiliations":[{"raw_affiliation_string":"Georgetown University Medical Center, Washington, DC","institution_ids":["https://openalex.org/I2799903593","https://openalex.org/I184565670"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5101585391","display_name":"Hongfang Liu","orcid":"https://orcid.org/0000-0003-2570-3741"},"institutions":[{"id":"https://openalex.org/I4210125099","display_name":"Mayo Clinic in Arizona","ror":"https://ror.org/03jp40720","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210125099"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hongfang Liu","raw_affiliation_strings":["Mayo Clinic, Rochester, MN"],"affiliations":[{"raw_affiliation_string":"Mayo Clinic, Rochester, MN","institution_ids":["https://openalex.org/I4210125099"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5041082275"],"corresponding_institution_ids":["https://openalex.org/I184565670","https://openalex.org/I2799903593"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.11216724,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"18","issue":null,"first_page":"462","last_page":"464"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9882000088691711,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12478","display_name":"Wikis in Education and Collaboration","score":0.9876000285148621,"subfield":{"id":"https://openalex.org/subfields/3315","display_name":"Communication"},"field":{"id":"https://openalex.org/fields/33","display_name":"Social Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/synonym","display_name":"Synonym (taxonomy)","score":0.9243985414505005},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7451010942459106},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.615110456943512},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.5611191987991333},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.40371400117874146},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.11079862713813782}],"concepts":[{"id":"https://openalex.org/C173483453","wikidata":"https://www.wikidata.org/wiki/Q1040689","display_name":"Synonym (taxonomy)","level":3,"score":0.9243985414505005},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7451010942459106},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.615110456943512},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.5611191987991333},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.40371400117874146},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.11079862713813782},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C157369684","wikidata":"https://www.wikidata.org/wiki/Q34740","display_name":"Genus","level":2,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/2147805.2147870","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2147805.2147870","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 2nd ACM Conference on Bioinformatics, Computational Biology and Biomedicine","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Quality Education","id":"https://metadata.un.org/sdg/4","score":0.7400000095367432}],"awards":[{"id":"https://openalex.org/G6289520784","display_name":null,"funder_award_id":"R01LM009959A1","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":3,"referenced_works":["https://openalex.org/W2061327015","https://openalex.org/W2140959081","https://openalex.org/W2152183901"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W2358668433","https://openalex.org/W4396701345","https://openalex.org/W2376156759","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W4396696052","https://openalex.org/W4402327032"],"abstract_inverted_index":{"Many":[0],"genes":[1],"and":[2,17],"proteins":[3],"have":[4,25],"alternate":[5],"names":[6],"(synonyms)":[7],"in":[8,76],"scientific":[9],"literature,":[10],"posing":[11],"a":[12,61,71,87],"challenge":[13],"to":[14,29,93],"effectively":[15],"organize":[16],"exchange":[18],"information.":[19],"To":[20],"address":[21],"this":[22],"issue,":[23],"there":[24,49],"been":[26],"several":[27],"initiatives":[28],"collate":[30],"the":[31,65],"synonyms":[32,53,95],"into":[33],"dictionaries.":[34],"Biothesaurus":[35],"is":[36],"an":[37],"extensive":[38,47],"dictionary":[39],"derived":[40],"from":[41],"multiple":[42],"authoritative":[43,79],"sources.":[44],"Despite":[45],"its":[46],"coverage,":[48],"are":[50,97],"still":[51],"some":[52],"not":[54,98],"covered":[55,100],"by":[56,101],"Biothesaurus.":[57,83,102],"Wikipedia":[58],"could":[59],"be":[60],"useful":[62],"source":[63],"of":[64,74,90],"missing":[66],"synonyms,":[67],"as":[68],"it":[69],"has":[70],"diverse":[72],"set":[73],"contributors":[75],"comparison":[77],"with":[78],"resources,":[80],"that":[81,96],"constitute":[82],"This":[84],"paper":[85],"reports":[86],"feasibility":[88],"study":[89],"using":[91],"WikiLinks":[92],"find":[94],"currently":[99]},"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
