{"id":"https://openalex.org/W2145317246","doi":"https://doi.org/10.1145/2110363.2110471","title":"PANI","display_name":"PANI","publication_year":2012,"publication_date":"2012-01-28","ids":{"openalex":"https://openalex.org/W2145317246","doi":"https://doi.org/10.1145/2110363.2110471","mag":"2145317246"},"language":"en","primary_location":{"id":"doi:10.1145/2110363.2110471","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2110363.2110471","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 2nd ACM SIGHIT International Health Informatics Symposium","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5055712344","display_name":"Huey-Eng Chua","orcid":null},"institutions":[{"id":"https://openalex.org/I172675005","display_name":"Nanyang Technological University","ror":"https://ror.org/02e7b5302","country_code":"SG","type":"education","lineage":["https://openalex.org/I172675005"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Huey-Eng Chua","raw_affiliation_strings":["Nanyang Technological University, Singapore, Singapore","Nanyang Technological University, Singapore, SINGAPORE#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Nanyang Technological University, Singapore, Singapore","institution_ids":["https://openalex.org/I172675005"]},{"raw_affiliation_string":"Nanyang Technological University, Singapore, SINGAPORE#TAB#","institution_ids":["https://openalex.org/I172675005"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061002947","display_name":"Sourav S. Bhowmick","orcid":"https://orcid.org/0000-0003-1957-8016"},"institutions":[{"id":"https://openalex.org/I172675005","display_name":"Nanyang Technological University","ror":"https://ror.org/02e7b5302","country_code":"SG","type":"education","lineage":["https://openalex.org/I172675005"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Sourav S. Bhowmick","raw_affiliation_strings":["Nanyang Technological University, Singapore, Singapore","Nanyang Technological University, Singapore, SINGAPORE#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Nanyang Technological University, Singapore, Singapore","institution_ids":["https://openalex.org/I172675005"]},{"raw_affiliation_string":"Nanyang Technological University, Singapore, SINGAPORE#TAB#","institution_ids":["https://openalex.org/I172675005"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031384457","display_name":"Lisa Tucker\u2010Kellogg","orcid":"https://orcid.org/0000-0002-1301-7069"},"institutions":[{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Lisa Tucker-Kellogg","raw_affiliation_strings":["National University of Singapore, Singapore, Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National University of Singapore, Singapore, Singapore","institution_ids":["https://openalex.org/I165932596"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100751765","display_name":"Yingqi Wang","orcid":"https://orcid.org/0000-0002-4030-1903"},"institutions":[{"id":"https://openalex.org/I172675005","display_name":"Nanyang Technological University","ror":"https://ror.org/02e7b5302","country_code":"SG","type":"education","lineage":["https://openalex.org/I172675005"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Yingqi Wang","raw_affiliation_strings":["Nanyang Technological University, Singapore, Singapore","Nanyang Technological University, Singapore, SINGAPORE#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Nanyang Technological University, Singapore, Singapore","institution_ids":["https://openalex.org/I172675005"]},{"raw_affiliation_string":"Nanyang Technological University, Singapore, SINGAPORE#TAB#","institution_ids":["https://openalex.org/I172675005"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109870759","display_name":"C. Forbes Dewey","orcid":null},"institutions":[{"id":"https://openalex.org/I63966007","display_name":"Massachusetts Institute of Technology","ror":"https://ror.org/042nb2s44","country_code":"US","type":"education","lineage":["https://openalex.org/I63966007"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"C. Forbes Dewey","raw_affiliation_strings":["Massachusetts Institute of Technology, Cambridge, MA, USA","Massachusetts Institute of Technology; ,; Cambridge MA USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Massachusetts Institute of Technology, Cambridge, MA, USA","institution_ids":["https://openalex.org/I63966007"]},{"raw_affiliation_string":"Massachusetts Institute of Technology; ,; Cambridge MA USA","institution_ids":["https://openalex.org/I63966007"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5034388961","display_name":"Hanry Yu","orcid":"https://orcid.org/0000-0002-0339-3685"},"institutions":[{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Hanry Yu","raw_affiliation_strings":["National University of Singapore, Singapore, Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National University of Singapore, Singapore, Singapore","institution_ids":["https://openalex.org/I165932596"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.9538,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.79994489,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"851","last_page":"854"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9976999759674072,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9976999759674072,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9973999857902527,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.996999979019165,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7633931636810303},{"id":"https://openalex.org/keywords/prioritization","display_name":"Prioritization","score":0.7452033758163452},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.650731086730957},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.6209866404533386},{"id":"https://openalex.org/keywords/distributed-computing","display_name":"Distributed computing","score":0.4694748818874359},{"id":"https://openalex.org/keywords/throughput","display_name":"Throughput","score":0.4591694474220276},{"id":"https://openalex.org/keywords/biological-network","display_name":"Biological network","score":0.4127293825149536},{"id":"https://openalex.org/keywords/interface","display_name":"Interface (matter)","score":0.4115833342075348},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.33942124247550964},{"id":"https://openalex.org/keywords/computer-network","display_name":"Computer network","score":0.3364256024360657},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.22554868459701538},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.08208149671554565},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.07710909843444824}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7633931636810303},{"id":"https://openalex.org/C2777615720","wikidata":"https://www.wikidata.org/wiki/Q11888847","display_name":"Prioritization","level":2,"score":0.7452033758163452},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.650731086730957},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.6209866404533386},{"id":"https://openalex.org/C120314980","wikidata":"https://www.wikidata.org/wiki/Q180634","display_name":"Distributed computing","level":1,"score":0.4694748818874359},{"id":"https://openalex.org/C157764524","wikidata":"https://www.wikidata.org/wiki/Q1383412","display_name":"Throughput","level":3,"score":0.4591694474220276},{"id":"https://openalex.org/C28225019","wikidata":"https://www.wikidata.org/wiki/Q4915005","display_name":"Biological network","level":2,"score":0.4127293825149536},{"id":"https://openalex.org/C113843644","wikidata":"https://www.wikidata.org/wiki/Q901882","display_name":"Interface (matter)","level":4,"score":0.4115833342075348},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.33942124247550964},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.3364256024360657},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.22554868459701538},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.08208149671554565},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.07710909843444824},{"id":"https://openalex.org/C555944384","wikidata":"https://www.wikidata.org/wiki/Q249","display_name":"Wireless","level":2,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.0},{"id":"https://openalex.org/C157915830","wikidata":"https://www.wikidata.org/wiki/Q2928001","display_name":"Bubble","level":2,"score":0.0},{"id":"https://openalex.org/C76155785","wikidata":"https://www.wikidata.org/wiki/Q418","display_name":"Telecommunications","level":1,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C129307140","wikidata":"https://www.wikidata.org/wiki/Q6795880","display_name":"Maximum bubble pressure method","level":3,"score":0.0},{"id":"https://openalex.org/C539667460","wikidata":"https://www.wikidata.org/wiki/Q2414942","display_name":"Management science","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1145/2110363.2110471","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2110363.2110471","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 2nd ACM SIGHIT International Health Informatics Symposium","raw_type":"proceedings-article"},{"id":"pmh:oai:scholarbank.nus.edu.sg:10635/112821","is_oa":false,"landing_page_url":"http://scholarbank.nus.edu.sg/handle/10635/112821","pdf_url":null,"source":{"id":"https://openalex.org/S7407052290","display_name":"National University of Singapore","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Scopus","raw_type":"Conference Paper"},{"id":"pmh:oai:dr.ntu.edu.sg:10356/107227","is_oa":false,"landing_page_url":"https://hdl.handle.net/10356/107227","pdf_url":null,"source":{"id":"https://openalex.org/S4306402609","display_name":"DR-NTU (Nanyang Technological University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I172675005","host_organization_name":"Nanyang Technological University","host_organization_lineage":["https://openalex.org/I172675005"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Conference Paper"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.6800000071525574,"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":14,"referenced_works":["https://openalex.org/W1534304300","https://openalex.org/W2000564108","https://openalex.org/W2007393641","https://openalex.org/W2017292900","https://openalex.org/W2018243063","https://openalex.org/W2026872793","https://openalex.org/W2039793587","https://openalex.org/W2054024422","https://openalex.org/W2083786039","https://openalex.org/W2101589741","https://openalex.org/W2107062718","https://openalex.org/W2139884531","https://openalex.org/W2154139219","https://openalex.org/W2171707538"],"related_works":["https://openalex.org/W2506292322","https://openalex.org/W4283209547","https://openalex.org/W4367627632","https://openalex.org/W653452717","https://openalex.org/W2554445088","https://openalex.org/W2621003306","https://openalex.org/W2335661150","https://openalex.org/W2136583354","https://openalex.org/W2111238207","https://openalex.org/W1595456161"],"abstract_inverted_index":{"Biological":[0],"network":[1,65,81,130],"analysis":[2,75],"often":[3],"aims":[4],"at":[5],"the":[6,35,121,139,142,146,162],"target":[7,51,123],"identification":[8],"problem,":[9],"which":[10,14,66],"is":[11,42,54,67],"to":[12,16,24,43,55,69,84,89],"predict":[13,56],"molecule":[15],"inhibit":[17],"(or":[18],"activate)":[19],"for":[20,97],"a":[21,57,62,79,109],"disease":[22],"treatment":[23],"achieve":[25],"optimum":[26],"efficacy":[27],"and":[28,93,119,129,134],"safety.":[29],"A":[30],"related":[31],"goal,":[32],"arising":[33],"from":[34],"increasing":[36],"availability":[37],"of":[38,59,141,155,161],"high-throughput":[39],"screening":[40],"(HTS),":[41],"suggest":[44],"many":[45],"molecules":[46,60],"as":[47],"potential":[48],"targets.":[49,73],"The":[50],"prioritization":[52],"problem":[53],"subset":[58],"in":[61,78,138],"given":[63],"disease-associated":[64],"likely":[68],"include":[70],"successful":[71],"drug":[72],"Sensitivity":[74],"prioritizes":[76],"targets":[77],"dynamic":[80],"model":[82],"according":[83],"principled":[85],"criteria,":[86],"but":[87],"fails":[88],"penalize":[90],"off-target":[91],"effects,":[92],"does":[94],"not":[95],"scale":[96],"large":[98],"networks.":[99],"In":[100],"this":[101],"demonstration,":[102],"we":[103,150],"present":[104],"PANI(Putative":[105],"TArget":[106],"Nodes":[107],"PrIoritization),":[108],"novel":[110],"interactive":[111,147],"system":[112],"that":[113,157],"addresses":[114],"these":[115],"limitations.":[116],"It":[117],"prunes":[118],"ranks":[120],"possible":[122],"nodes":[124],"by":[125],"exploiting":[126],"concentration-time":[127],"profiles":[128],"structure":[131],"(topological)":[132],"information":[133],"visually":[135],"display":[136],"them":[137],"context":[140],"signaling":[143],"network.":[144],"Through":[145],"user":[148],"interface,":[149],"demonstrate":[151],"various":[152],"innovative":[153],"features":[154],"PANI":[156],"enhance":[158],"users'":[159],"understanding":[160],"prioritized":[163],"nodes.":[164]},"counts_by_year":[{"year":2015,"cited_by_count":1}],"updated_date":"2026-07-29T14:22:42.915294","created_date":"2016-06-24T00:00:00"}
