{"id":"https://openalex.org/W1966758679","doi":"https://doi.org/10.1145/2063384.2063483","title":"A fast solver for modeling the evolution of virus populations","display_name":"A fast solver for modeling the evolution of virus populations","publication_year":2011,"publication_date":"2011-11-08","ids":{"openalex":"https://openalex.org/W1966758679","doi":"https://doi.org/10.1145/2063384.2063483","mag":"1966758679"},"language":"en","primary_location":{"id":"doi:10.1145/2063384.2063483","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2063384.2063483","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of 2011 International Conference for High Performance Computing, Networking, Storage and Analysis","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5022220117","display_name":"Gerhard Niederbrucker","orcid":null},"institutions":[{"id":"https://openalex.org/I129774422","display_name":"University of Vienna","ror":"https://ror.org/03prydq77","country_code":"AT","type":"education","lineage":["https://openalex.org/I129774422"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Gerhard Niederbrucker","raw_affiliation_strings":["University of Vienna","University of Vienna, Research Group Theory and Applications of Algorithms"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Vienna","institution_ids":["https://openalex.org/I129774422"]},{"raw_affiliation_string":"University of Vienna, Research Group Theory and Applications of Algorithms","institution_ids":["https://openalex.org/I129774422"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5021065276","display_name":"Wilfried N. Gansterer","orcid":"https://orcid.org/0000-0001-5170-1251"},"institutions":[{"id":"https://openalex.org/I129774422","display_name":"University of Vienna","ror":"https://ror.org/03prydq77","country_code":"AT","type":"education","lineage":["https://openalex.org/I129774422"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Wilfried N. Gansterer","raw_affiliation_strings":["University of Vienna","University of Vienna, Research Group Theory and Applications of Algorithms"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Vienna","institution_ids":["https://openalex.org/I129774422"]},{"raw_affiliation_string":"University of Vienna, Research Group Theory and Applications of Algorithms","institution_ids":["https://openalex.org/I129774422"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I129774422"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.10760999,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"11"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11764","display_name":"Evolution and Genetic Dynamics","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11764","display_name":"Evolution and Genetic Dynamics","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11252","display_name":"Evolutionary Game Theory and Cooperation","score":0.9976999759674072,"subfield":{"id":"https://openalex.org/subfields/3312","display_name":"Sociology and Political Science"},"field":{"id":"https://openalex.org/fields/33","display_name":"Social Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T10482","display_name":"Mathematical and Theoretical Epidemiology and Ecology Models","score":0.9904999732971191,"subfield":{"id":"https://openalex.org/subfields/2739","display_name":"Public Health, Environmental and Occupational Health"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/viral-quasispecies","display_name":"Viral quasispecies","score":0.7281897664070129},{"id":"https://openalex.org/keywords/eigenvalues-and-eigenvectors","display_name":"Eigenvalues and eigenvectors","score":0.6608513593673706},{"id":"https://openalex.org/keywords/computation","display_name":"Computation","score":0.6576550006866455},{"id":"https://openalex.org/keywords/solver","display_name":"Solver","score":0.5859322547912598},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5540204644203186},{"id":"https://openalex.org/keywords/matrix","display_name":"Matrix (chemical analysis)","score":0.48338642716407776},{"id":"https://openalex.org/keywords/exponential-growth","display_name":"Exponential growth","score":0.46180739998817444},{"id":"https://openalex.org/keywords/chain","display_name":"Chain (unit)","score":0.43145740032196045},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.3952472507953644},{"id":"https://openalex.org/keywords/virus","display_name":"Virus","score":0.33069682121276855},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.2624272108078003},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.22406277060508728},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.14436697959899902},{"id":"https://openalex.org/keywords/virology","display_name":"Virology","score":0.10762390494346619}],"concepts":[{"id":"https://openalex.org/C14500911","wikidata":"https://www.wikidata.org/wiki/Q3413375","display_name":"Viral quasispecies","level":4,"score":0.7281897664070129},{"id":"https://openalex.org/C158693339","wikidata":"https://www.wikidata.org/wiki/Q190524","display_name":"Eigenvalues and eigenvectors","level":2,"score":0.6608513593673706},{"id":"https://openalex.org/C45374587","wikidata":"https://www.wikidata.org/wiki/Q12525525","display_name":"Computation","level":2,"score":0.6576550006866455},{"id":"https://openalex.org/C2778770139","wikidata":"https://www.wikidata.org/wiki/Q1966904","display_name":"Solver","level":2,"score":0.5859322547912598},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5540204644203186},{"id":"https://openalex.org/C106487976","wikidata":"https://www.wikidata.org/wiki/Q685816","display_name":"Matrix (chemical analysis)","level":2,"score":0.48338642716407776},{"id":"https://openalex.org/C75235859","wikidata":"https://www.wikidata.org/wiki/Q582659","display_name":"Exponential growth","level":2,"score":0.46180739998817444},{"id":"https://openalex.org/C199185054","wikidata":"https://www.wikidata.org/wiki/Q552299","display_name":"Chain (unit)","level":2,"score":0.43145740032196045},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.3952472507953644},{"id":"https://openalex.org/C2522874641","wikidata":"https://www.wikidata.org/wiki/Q808","display_name":"Virus","level":2,"score":0.33069682121276855},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.2624272108078003},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.22406277060508728},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.14436697959899902},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.10762390494346619},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C1276947","wikidata":"https://www.wikidata.org/wiki/Q333","display_name":"Astronomy","level":1,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C159985019","wikidata":"https://www.wikidata.org/wiki/Q181790","display_name":"Composite material","level":1,"score":0.0},{"id":"https://openalex.org/C192562407","wikidata":"https://www.wikidata.org/wiki/Q228736","display_name":"Materials science","level":0,"score":0.0},{"id":"https://openalex.org/C2776408679","wikidata":"https://www.wikidata.org/wiki/Q708693","display_name":"Hepatitis C virus","level":3,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/2063384.2063483","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2063384.2063483","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of 2011 International Conference for High Performance Computing, Networking, Storage and Analysis","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1327020856","display_name":null,"funder_award_id":"S10608 (NFN SISE)","funder_id":"https://openalex.org/F4320321181","funder_display_name":"Austrian Science Fund"}],"funders":[{"id":"https://openalex.org/F4320321181","display_name":"Austrian Science Fund","ror":"https://ror.org/013tf3c58"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":21,"referenced_works":["https://openalex.org/W73629738","https://openalex.org/W163803305","https://openalex.org/W1547541251","https://openalex.org/W1568377519","https://openalex.org/W1779006005","https://openalex.org/W1980001941","https://openalex.org/W1981105411","https://openalex.org/W1982479532","https://openalex.org/W2025334662","https://openalex.org/W2036714315","https://openalex.org/W2037212056","https://openalex.org/W2053109557","https://openalex.org/W2073389244","https://openalex.org/W2087895317","https://openalex.org/W2091527916","https://openalex.org/W2802074788","https://openalex.org/W2970618185","https://openalex.org/W3000068290","https://openalex.org/W3183881215","https://openalex.org/W4285719527","https://openalex.org/W6603010030"],"related_works":["https://openalex.org/W2370565492","https://openalex.org/W2016766059","https://openalex.org/W2029741357","https://openalex.org/W2144907742","https://openalex.org/W1748700469","https://openalex.org/W2009366069","https://openalex.org/W2620872782","https://openalex.org/W2086431635","https://openalex.org/W4253376477","https://openalex.org/W2073918065"],"abstract_inverted_index":{"Solving":[0],"Eigen's":[1],"quasispecies":[2],"model":[3],"for":[4],"the":[5,11,14,26,30,45],"evolution":[6],"of":[7,13,17,29,47],"virus":[8,31],"populations":[9],"involves":[10],"computation":[12],"dominant":[15],"eigenvector":[16],"a":[18],"matrix":[19],"whose":[20],"size":[21],"N":[22],"grows":[23],"exponentially":[24],"with":[25],"chain":[27,38],"length":[28],"to":[32],"be":[33],"modeled.":[34],"Most":[35],"biologically":[36],"interesting":[37],"lengths":[39],"are":[40],"so":[41],"far":[42],"well":[43],"beyond":[44],"reach":[46],"existing":[48],"algorithms":[49],"and":[50],"hardware.":[51]},"counts_by_year":[{"year":2022,"cited_by_count":1}],"updated_date":"2026-07-29T14:22:42.915294","created_date":"2025-10-10T00:00:00"}
