{"id":"https://openalex.org/W2005677940","doi":"https://doi.org/10.1145/1882992.1883106","title":"Automatic identification of biomedical concepts in spanish-language unstructured clinical texts","display_name":"Automatic identification of biomedical concepts in spanish-language unstructured clinical texts","publication_year":2010,"publication_date":"2010-11-11","ids":{"openalex":"https://openalex.org/W2005677940","doi":"https://doi.org/10.1145/1882992.1883106","mag":"2005677940"},"language":"en","primary_location":{"id":"doi:10.1145/1882992.1883106","is_oa":false,"landing_page_url":"https://doi.org/10.1145/1882992.1883106","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 1st ACM International Health Informatics Symposium","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"http://hdl.handle.net/10016/17263","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100996790","display_name":"Elena Castro","orcid":"https://orcid.org/0000-0002-3691-6454"},"institutions":[{"id":"https://openalex.org/I50357001","display_name":"Universidad Carlos III de Madrid","ror":"https://ror.org/03ths8210","country_code":"ES","type":"education","lineage":["https://openalex.org/I50357001"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Elena Castro","raw_affiliation_strings":["Universidad Carlos III de Madrid, Madrid, Spain"],"affiliations":[{"raw_affiliation_string":"Universidad Carlos III de Madrid, Madrid, Spain","institution_ids":["https://openalex.org/I50357001"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070024418","display_name":"Ana Iglesias","orcid":"https://orcid.org/0000-0002-4685-5034"},"institutions":[{"id":"https://openalex.org/I50357001","display_name":"Universidad Carlos III de Madrid","ror":"https://ror.org/03ths8210","country_code":"ES","type":"education","lineage":["https://openalex.org/I50357001"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Ana Iglesias","raw_affiliation_strings":["Universidad Carlos III de Madrid, Madrid, Spain"],"affiliations":[{"raw_affiliation_string":"Universidad Carlos III de Madrid, Madrid, Spain","institution_ids":["https://openalex.org/I50357001"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009969418","display_name":"Paloma Mart\u0131\u0301nez","orcid":"https://orcid.org/0000-0003-3013-3771"},"institutions":[{"id":"https://openalex.org/I50357001","display_name":"Universidad Carlos III de Madrid","ror":"https://ror.org/03ths8210","country_code":"ES","type":"education","lineage":["https://openalex.org/I50357001"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Paloma Mart\u00ednez","raw_affiliation_strings":["Universidad Carlos III de Madrid, Madrid, Spain"],"affiliations":[{"raw_affiliation_string":"Universidad Carlos III de Madrid, Madrid, Spain","institution_ids":["https://openalex.org/I50357001"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5076873791","display_name":"Leonardo Casta\u00f1o","orcid":null},"institutions":[{"id":"https://openalex.org/I50357001","display_name":"Universidad Carlos III de Madrid","ror":"https://ror.org/03ths8210","country_code":"ES","type":"education","lineage":["https://openalex.org/I50357001"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Leonardo Casta\u00f1o","raw_affiliation_strings":["Universidad Carlos III de Madrid, Madrid, Spain"],"affiliations":[{"raw_affiliation_string":"Universidad Carlos III de Madrid, Madrid, Spain","institution_ids":["https://openalex.org/I50357001"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5100996790"],"corresponding_institution_ids":["https://openalex.org/I50357001"],"apc_list":null,"apc_paid":null,"fwci":0.6759,"has_fulltext":false,"cited_by_count":12,"citation_normalized_percentile":{"value":0.68325769,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":null,"issue":null,"first_page":"751","last_page":"757"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9929999709129333,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10181","display_name":"Natural Language Processing Techniques","score":0.9563000202178955,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/unified-medical-language-system","display_name":"Unified Medical Language System","score":0.9136539697647095},{"id":"https://openalex.org/keywords/snomed-ct","display_name":"SNOMED CT","score":0.8842633962631226},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7787073254585266},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.6542890071868896},{"id":"https://openalex.org/keywords/unstructured-data","display_name":"Unstructured data","score":0.6332986354827881},{"id":"https://openalex.org/keywords/terminology","display_name":"Terminology","score":0.6266165375709534},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.571860671043396},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.5010733604431152},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.49860119819641113},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.49377283453941345},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4896886646747589},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.4851025342941284},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.4598674476146698},{"id":"https://openalex.org/keywords/systematized-nomenclature-of-medicine","display_name":"Systematized Nomenclature of Medicine","score":0.4425259232521057},{"id":"https://openalex.org/keywords/medical-terminology","display_name":"Medical terminology","score":0.429146409034729},{"id":"https://openalex.org/keywords/point","display_name":"Point (geometry)","score":0.42215028405189514},{"id":"https://openalex.org/keywords/linguistics","display_name":"Linguistics","score":0.28873908519744873},{"id":"https://openalex.org/keywords/big-data","display_name":"Big data","score":0.15141040086746216},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.09933379292488098}],"concepts":[{"id":"https://openalex.org/C69505689","wikidata":"https://www.wikidata.org/wiki/Q455338","display_name":"Unified Medical Language System","level":2,"score":0.9136539697647095},{"id":"https://openalex.org/C206497026","wikidata":"https://www.wikidata.org/wiki/Q1753883","display_name":"SNOMED CT","level":3,"score":0.8842633962631226},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7787073254585266},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.6542890071868896},{"id":"https://openalex.org/C2781252014","wikidata":"https://www.wikidata.org/wiki/Q1141900","display_name":"Unstructured data","level":3,"score":0.6332986354827881},{"id":"https://openalex.org/C547195049","wikidata":"https://www.wikidata.org/wiki/Q1725664","display_name":"Terminology","level":2,"score":0.6266165375709534},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.571860671043396},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.5010733604431152},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.49860119819641113},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.49377283453941345},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4896886646747589},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.4851025342941284},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.4598674476146698},{"id":"https://openalex.org/C44681071","wikidata":"https://www.wikidata.org/wiki/Q4048820","display_name":"Systematized Nomenclature of Medicine","level":4,"score":0.4425259232521057},{"id":"https://openalex.org/C511227900","wikidata":"https://www.wikidata.org/wiki/Q1192539","display_name":"Medical terminology","level":2,"score":0.429146409034729},{"id":"https://openalex.org/C28719098","wikidata":"https://www.wikidata.org/wiki/Q44946","display_name":"Point (geometry)","level":2,"score":0.42215028405189514},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.28873908519744873},{"id":"https://openalex.org/C75684735","wikidata":"https://www.wikidata.org/wiki/Q858810","display_name":"Big data","level":2,"score":0.15141040086746216},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.09933379292488098},{"id":"https://openalex.org/C187736073","wikidata":"https://www.wikidata.org/wiki/Q2920921","display_name":"Management","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1145/1882992.1883106","is_oa":false,"landing_page_url":"https://doi.org/10.1145/1882992.1883106","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 1st ACM International Health Informatics Symposium","raw_type":"proceedings-article"},{"id":"pmh:oai:e-archivo.uc3m.es:10016/17263","is_oa":true,"landing_page_url":"http://hdl.handle.net/10016/17263","pdf_url":null,"source":{"id":"https://openalex.org/S4306400817","display_name":"e-Archivo (Carlos III University of Madrid)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I50357001","host_organization_name":"Universidad Carlos III de Madrid","host_organization_lineage":["https://openalex.org/I50357001"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/other"}],"best_oa_location":{"id":"pmh:oai:e-archivo.uc3m.es:10016/17263","is_oa":true,"landing_page_url":"http://hdl.handle.net/10016/17263","pdf_url":null,"source":{"id":"https://openalex.org/S4306400817","display_name":"e-Archivo (Carlos III University of Madrid)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I50357001","host_organization_name":"Universidad Carlos III de Madrid","host_organization_lineage":["https://openalex.org/I50357001"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/other"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/4","score":0.6499999761581421,"display_name":"Quality Education"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":25,"referenced_works":["https://openalex.org/W117417559","https://openalex.org/W120585518","https://openalex.org/W139057381","https://openalex.org/W147005687","https://openalex.org/W204159428","https://openalex.org/W204556058","https://openalex.org/W1533057952","https://openalex.org/W1536678384","https://openalex.org/W1550258693","https://openalex.org/W1553529581","https://openalex.org/W1568553947","https://openalex.org/W1817681271","https://openalex.org/W1974948930","https://openalex.org/W2023626710","https://openalex.org/W2037968453","https://openalex.org/W2115904927","https://openalex.org/W2169918010","https://openalex.org/W2404602200","https://openalex.org/W2568020214","https://openalex.org/W2911706034","https://openalex.org/W3047323833","https://openalex.org/W6600834676","https://openalex.org/W6601264160","https://openalex.org/W6601546630","https://openalex.org/W6633075837"],"related_works":["https://openalex.org/W2181479088","https://openalex.org/W2010248145","https://openalex.org/W2037829818","https://openalex.org/W1485513899","https://openalex.org/W1682743535","https://openalex.org/W2044298438","https://openalex.org/W4282583959","https://openalex.org/W3026755508","https://openalex.org/W4206342372","https://openalex.org/W2914040075"],"abstract_inverted_index":{"The":[0,157],"processing":[1],"of":[2,20,35,47,80,98,110,128,149,170,178],"health":[3],"information":[4],"from":[5],"medical":[6],"records":[7],"and,":[8],"especially,":[9],"clinical":[10,82,116,122,183],"notes":[11,117,123],"is":[12,118,137],"a":[13,56,73,129,164],"complex":[14],"task":[15],"due":[16],"to":[17,43,89,181],"the":[18,21,33,36,52,67,77,90,96,102,111,121,133,146,153,168,176],"nature":[19],"texts":[22,48,63],"themeselves":[23],"(i.e.,":[24],"hand-written":[25],"and":[26,32,49,64,175],"containing":[27],"semi-structured":[28],"or":[29],"unstructured":[30],"data)":[31],"diversity":[34],"terminology":[37],"used.":[38],"While":[39],"certain":[40],"technologies":[41],"exist":[42,60],"process":[44],"these":[45],"types":[46,148],"data":[50,65],"in":[51,66,101,160],"English":[53],"language,":[54],"only":[55],"few":[57],"such":[58],"initiatives":[59],"for":[61,76,95,145,167],"similar":[62,88],"Spanish":[68,130],"language.":[69],"This":[70],"paper":[71],"presents":[72],"new":[74],"proposal":[75],"semantic":[78,171],"annotation":[79],"Spanish-language":[81,103,115,182],"notes,":[83],"implementing":[84],"an":[85,108],"automated":[86,154],"tool":[87,112,155],"UMLS":[91],"MetaMap":[92],"Transfer":[93],"(MMTx)":[94],"identification":[97],"biomedical":[99],"concepts":[100,174],"SNOMED":[104],"CT":[105],"ontology.":[106],"Moreover,":[107],"assessment":[109],"using":[113],"100":[114],"presented.":[119],"Using":[120],"manually":[124],"annotated":[125],"by":[126,152],"specialists":[127],"hospital":[131],"as":[132],"gold":[134],"standard,":[135],"it":[136],"concluded":[138],"that":[139],"precision":[140],"scores":[141],"are":[142],"sufficiently":[143],"good":[144],"several":[147],"matching":[150],"achieved":[151],"proposed.":[156],"research":[158],"presented":[159],"this":[161],"contribution":[162],"offers":[163],"launching":[165],"point":[166],"establishment":[169],"relationships":[172],"between":[173],"application":[177],"mining":[179],"techniques":[180],"notes.":[184]},"counts_by_year":[{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":2},{"year":2013,"cited_by_count":3}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
