{"id":"https://openalex.org/W2039918504","doi":"https://doi.org/10.1145/1854776.1854903","title":"Effective neutralization and neutralization epitope masking signatures for four anti-V3 mAbs","display_name":"Effective neutralization and neutralization epitope masking signatures for four anti-V3 mAbs","publication_year":2010,"publication_date":"2010-08-02","ids":{"openalex":"https://openalex.org/W2039918504","doi":"https://doi.org/10.1145/1854776.1854903","mag":"2039918504"},"language":"en","primary_location":{"id":"doi:10.1145/1854776.1854903","is_oa":false,"landing_page_url":"https://doi.org/10.1145/1854776.1854903","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the First ACM International Conference on Bioinformatics and Computational Biology","raw_type":"proceedings-article"},"type":"conference-abstract","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5054767788","display_name":"Alpna Agarwal","orcid":null},"institutions":[{"id":"https://openalex.org/I57206974","display_name":"New York University","ror":"https://ror.org/0190ak572","country_code":"US","type":"education","lineage":["https://openalex.org/I57206974"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Alpna Agarwal","raw_affiliation_strings":["NYU School of Medicine, New York, NY"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"NYU School of Medicine, New York, NY","institution_ids":["https://openalex.org/I57206974"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041332295","display_name":"Susan Zolla\u2010Pazner","orcid":"https://orcid.org/0000-0002-0750-2666"},"institutions":[{"id":"https://openalex.org/I2799886695","display_name":"Veterans Health Administration","ror":"https://ror.org/05eq41471","country_code":"US","type":"government","lineage":["https://openalex.org/I1322918889","https://openalex.org/I2799886695"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Susan Zolla-Pazner","raw_affiliation_strings":["New York Veterans Affairs Medical Center, New York NY"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"New York Veterans Affairs Medical Center, New York NY","institution_ids":["https://openalex.org/I2799886695"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075923016","display_name":"James Swetnam","orcid":null},"institutions":[{"id":"https://openalex.org/I57206974","display_name":"New York University","ror":"https://ror.org/0190ak572","country_code":"US","type":"education","lineage":["https://openalex.org/I57206974"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"James Swetnam","raw_affiliation_strings":["NYU School of Medicine, New York, NY"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"NYU School of Medicine, New York, NY","institution_ids":["https://openalex.org/I57206974"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5075646734","display_name":"Timothy Cardozo","orcid":"https://orcid.org/0000-0002-0643-4497"},"institutions":[{"id":"https://openalex.org/I57206974","display_name":"New York University","ror":"https://ror.org/0190ak572","country_code":"US","type":"education","lineage":["https://openalex.org/I57206974"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Timothy Cardozo","raw_affiliation_strings":["NYU School of Medicine, New York, NY"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"NYU School of Medicine, New York, NY","institution_ids":["https://openalex.org/I57206974"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"656","last_page":"656"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10112","display_name":"HIV Research and Treatment","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/2406","display_name":"Virology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10112","display_name":"HIV Research and Treatment","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/2406","display_name":"Virology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11016","display_name":"Monoclonal and Polyclonal Antibodies Research","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10602","display_name":"Glycosylation and Glycoproteins Research","score":0.9962999820709229,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/epitope","display_name":"Epitope","score":0.9655495882034302},{"id":"https://openalex.org/keywords/neutralization","display_name":"Neutralization","score":0.9434033632278442},{"id":"https://openalex.org/keywords/monoclonal-antibody","display_name":"Monoclonal antibody","score":0.7126573324203491},{"id":"https://openalex.org/keywords/virology","display_name":"Virology","score":0.5851298570632935},{"id":"https://openalex.org/keywords/glycoprotein","display_name":"Glycoprotein","score":0.546371340751648},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.5137368440628052},{"id":"https://openalex.org/keywords/antibody","display_name":"Antibody","score":0.45390382409095764},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2570763826370239},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.14107465744018555},{"id":"https://openalex.org/keywords/immunology","display_name":"Immunology","score":0.12016254663467407},{"id":"https://openalex.org/keywords/virus","display_name":"Virus","score":0.10140767693519592}],"concepts":[{"id":"https://openalex.org/C195616568","wikidata":"https://www.wikidata.org/wiki/Q128711","display_name":"Epitope","level":3,"score":0.9655495882034302},{"id":"https://openalex.org/C14086860","wikidata":"https://www.wikidata.org/wiki/Q337120","display_name":"Neutralization","level":3,"score":0.9434033632278442},{"id":"https://openalex.org/C542903549","wikidata":"https://www.wikidata.org/wiki/Q422248","display_name":"Monoclonal antibody","level":3,"score":0.7126573324203491},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.5851298570632935},{"id":"https://openalex.org/C108625454","wikidata":"https://www.wikidata.org/wiki/Q187126","display_name":"Glycoprotein","level":2,"score":0.546371340751648},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.5137368440628052},{"id":"https://openalex.org/C159654299","wikidata":"https://www.wikidata.org/wiki/Q79460","display_name":"Antibody","level":2,"score":0.45390382409095764},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2570763826370239},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.14107465744018555},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.12016254663467407},{"id":"https://openalex.org/C2522874641","wikidata":"https://www.wikidata.org/wiki/Q808","display_name":"Virus","level":2,"score":0.10140767693519592}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/1854776.1854903","is_oa":false,"landing_page_url":"https://doi.org/10.1145/1854776.1854903","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the First ACM International Conference on Bioinformatics and Computational Biology","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3","score":0.699999988079071}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W2021824670","https://openalex.org/W2009867644","https://openalex.org/W2363997565","https://openalex.org/W1981120125","https://openalex.org/W3036615648","https://openalex.org/W2408448169","https://openalex.org/W2182598264","https://openalex.org/W1977627421","https://openalex.org/W1999686187","https://openalex.org/W3047706242"],"abstract_inverted_index":{"Effective":[0],"antibody-mediated":[1],"HIV-1":[2,46],"neutralization":[3,39,58],"may":[4,21],"be":[5,22],"significantly":[6],"diminished":[7],"by":[8,26,29,31],"factors":[9],"such":[10],"as":[11],"epitope":[12,40,64],"masking.":[13],"Epitopes":[14],"on":[15,42,56],"HIV's":[16],"surface":[17],"envelope":[18],"glycoprotein":[19],"(gp120)":[20],"masked":[23],"either":[24],"intrinsically,":[25],"glycans,":[27],"or":[28,50],"occlusion":[30],"other":[32],"protein":[33],"regions.":[34],"Previously,":[35],"we":[36],"quantitatively":[37],"assessed":[38],"masking":[41],"a":[43],"panel":[44],"of":[45],"pseudoviruses":[47],"(psVs),":[48],"with":[49],"without":[51],"specific":[52],"mAb":[53],"epitopes,":[54],"based":[55],"IC50":[57],"data":[59],"and":[60,73],"monoclonal":[61],"antibody":[62],"(mAb)":[63],"sequence":[65],"motifs":[66],"obtained":[67],"from":[68],"Hioe":[69],"et":[70,75],"al.":[71,76],"(2010)":[72],"Cardozo":[74],"(2009),":[77],"respectively.":[78]},"counts_by_year":[],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-10-10T00:00:00"}
