{"id":"https://openalex.org/W1987574216","doi":"https://doi.org/10.1145/1854776.1854891","title":"Immunoinformatic approach to a multi-pathogen genome-derived epitope-driven vaccine","display_name":"Immunoinformatic approach to a multi-pathogen genome-derived epitope-driven vaccine","publication_year":2010,"publication_date":"2010-08-02","ids":{"openalex":"https://openalex.org/W1987574216","doi":"https://doi.org/10.1145/1854776.1854891","mag":"1987574216"},"language":"en","primary_location":{"id":"doi:10.1145/1854776.1854891","is_oa":false,"landing_page_url":"https://doi.org/10.1145/1854776.1854891","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the First ACM International Conference on Bioinformatics and Computational Biology","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5110643156","display_name":"Matthew Ardito","orcid":null},"institutions":[{"id":"https://openalex.org/I196272386","display_name":"Providence College","ror":"https://ror.org/00rxpqe74","country_code":"US","type":"education","lineage":["https://openalex.org/I196272386"]},{"id":"https://openalex.org/I4210147457","display_name":"EpiVax (United States)","ror":"https://ror.org/055qxpb63","country_code":"US","type":"company","lineage":["https://openalex.org/I4210147457"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Matthew Ardito","raw_affiliation_strings":["EpiVax, Providence, RI"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"EpiVax, Providence, RI","institution_ids":["https://openalex.org/I196272386","https://openalex.org/I4210147457"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061582756","display_name":"Leonard Moise","orcid":"https://orcid.org/0000-0002-4410-865X"},"institutions":[{"id":"https://openalex.org/I17626003","display_name":"University of Rhode Island","ror":"https://ror.org/013ckk937","country_code":"US","type":"education","lineage":["https://openalex.org/I17626003"]},{"id":"https://openalex.org/I196272386","display_name":"Providence College","ror":"https://ror.org/00rxpqe74","country_code":"US","type":"education","lineage":["https://openalex.org/I196272386"]},{"id":"https://openalex.org/I4210147457","display_name":"EpiVax (United States)","ror":"https://ror.org/055qxpb63","country_code":"US","type":"company","lineage":["https://openalex.org/I4210147457"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Leonard Moise","raw_affiliation_strings":["EpiVax, Providence, RI and University of Rhode Island, Providence, RI","EpiVax, Providence, RI and University of Rhode Island, Providence, RI#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"EpiVax, Providence, RI and University of Rhode Island, Providence, RI","institution_ids":["https://openalex.org/I17626003","https://openalex.org/I196272386","https://openalex.org/I4210147457"]},{"raw_affiliation_string":"EpiVax, Providence, RI and University of Rhode Island, Providence, RI#TAB#","institution_ids":["https://openalex.org/I17626003"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053675979","display_name":"William Martin","orcid":"https://orcid.org/0000-0001-8694-494X"},"institutions":[{"id":"https://openalex.org/I196272386","display_name":"Providence College","ror":"https://ror.org/00rxpqe74","country_code":"US","type":"education","lineage":["https://openalex.org/I196272386"]},{"id":"https://openalex.org/I4210147457","display_name":"EpiVax (United States)","ror":"https://ror.org/055qxpb63","country_code":"US","type":"company","lineage":["https://openalex.org/I4210147457"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"William Martin","raw_affiliation_strings":["EpiVax, Providence, RI"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"EpiVax, Providence, RI","institution_ids":["https://openalex.org/I196272386","https://openalex.org/I4210147457"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5089204881","display_name":"Anne S. De Groot","orcid":"https://orcid.org/0000-0001-5911-1459"},"institutions":[{"id":"https://openalex.org/I17626003","display_name":"University of Rhode Island","ror":"https://ror.org/013ckk937","country_code":"US","type":"education","lineage":["https://openalex.org/I17626003"]},{"id":"https://openalex.org/I27804330","display_name":"Brown University","ror":"https://ror.org/05gq02987","country_code":"US","type":"education","lineage":["https://openalex.org/I27804330"]},{"id":"https://openalex.org/I4210147457","display_name":"EpiVax (United States)","ror":"https://ror.org/055qxpb63","country_code":"US","type":"company","lineage":["https://openalex.org/I4210147457"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Anne S. De Groot","raw_affiliation_strings":["EpiVax, Providence, RI and University of Rhode Island, Providence, RI and Brown University, Providence, RI"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"EpiVax, Providence, RI and University of Rhode Island, Providence, RI and Brown University, Providence, RI","institution_ids":["https://openalex.org/I17626003","https://openalex.org/I27804330","https://openalex.org/I4210147457"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.12352478,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"616","last_page":"620"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12951","display_name":"Burkholderia infections and melioidosis","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T12951","display_name":"Burkholderia infections and melioidosis","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11764","display_name":"Evolution and Genetic Dynamics","score":0.9190000295639038,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12134","display_name":"Insect symbiosis and bacterial influences","score":0.9060999751091003,"subfield":{"id":"https://openalex.org/subfields/1109","display_name":"Insect Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/epitope","display_name":"Epitope","score":0.9548788070678711},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.573396623134613},{"id":"https://openalex.org/keywords/antigen","display_name":"Antigen","score":0.5628901720046997},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5589529275894165},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5499482154846191},{"id":"https://openalex.org/keywords/burkholderia","display_name":"Burkholderia","score":0.5415419340133667},{"id":"https://openalex.org/keywords/virology","display_name":"Virology","score":0.4996960163116455},{"id":"https://openalex.org/keywords/immune-system","display_name":"Immune system","score":0.4615519046783447},{"id":"https://openalex.org/keywords/microbiology","display_name":"Microbiology","score":0.45052841305732727},{"id":"https://openalex.org/keywords/pathogen","display_name":"Pathogen","score":0.41085416078567505},{"id":"https://openalex.org/keywords/immunology","display_name":"Immunology","score":0.2019733190536499},{"id":"https://openalex.org/keywords/bacteria","display_name":"Bacteria","score":0.17239612340927124},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.15601783990859985}],"concepts":[{"id":"https://openalex.org/C195616568","wikidata":"https://www.wikidata.org/wiki/Q128711","display_name":"Epitope","level":3,"score":0.9548788070678711},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.573396623134613},{"id":"https://openalex.org/C147483822","wikidata":"https://www.wikidata.org/wiki/Q103537","display_name":"Antigen","level":2,"score":0.5628901720046997},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5589529275894165},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5499482154846191},{"id":"https://openalex.org/C2780855054","wikidata":"https://www.wikidata.org/wiki/Q135239","display_name":"Burkholderia","level":3,"score":0.5415419340133667},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.4996960163116455},{"id":"https://openalex.org/C8891405","wikidata":"https://www.wikidata.org/wiki/Q1059","display_name":"Immune system","level":2,"score":0.4615519046783447},{"id":"https://openalex.org/C89423630","wikidata":"https://www.wikidata.org/wiki/Q7193","display_name":"Microbiology","level":1,"score":0.45052841305732727},{"id":"https://openalex.org/C2776460866","wikidata":"https://www.wikidata.org/wiki/Q170065","display_name":"Pathogen","level":2,"score":0.41085416078567505},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.2019733190536499},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.17239612340927124},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.15601783990859985},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/1854776.1854891","is_oa":false,"landing_page_url":"https://doi.org/10.1145/1854776.1854891","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the First ACM International Conference on Bioinformatics and Computational Biology","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3","score":0.5899999737739563}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":14,"referenced_works":["https://openalex.org/W1944657476","https://openalex.org/W1971147414","https://openalex.org/W1975304761","https://openalex.org/W2011675001","https://openalex.org/W2015855391","https://openalex.org/W2020646715","https://openalex.org/W2053893045","https://openalex.org/W2128476735","https://openalex.org/W2131778683","https://openalex.org/W2132666490","https://openalex.org/W2136349638","https://openalex.org/W2147633054","https://openalex.org/W2170163435","https://openalex.org/W4251079740"],"related_works":["https://openalex.org/W2021824670","https://openalex.org/W2009867644","https://openalex.org/W2363997565","https://openalex.org/W1981120125","https://openalex.org/W3036615648","https://openalex.org/W2408448169","https://openalex.org/W2182598264","https://openalex.org/W2075879923","https://openalex.org/W2107014805","https://openalex.org/W1992506606"],"abstract_inverted_index":{"The":[0],"first":[1],"step":[2],"in":[3],"the":[4,14,40,53,66],"development":[5],"of":[6,16,68],"any":[7],"rationally":[8],"designed":[9],"or":[10],"\"immunome-derived\"":[11],"vaccine":[12,78],"is":[13],"identification":[15],"a":[17],"target":[18],"organism":[19],"and":[20,86,94],"associated":[21],"protein":[22,42],"antigens.":[23],"Once":[24],"identified,":[25],"candidate":[26],"proteins":[27],"may":[28],"be":[29],"evaluated":[30],"for":[31,60,83,89],"T":[32,36,48],"cell":[33,37,49],"epitope":[34],"content.":[35],"epitopes":[38,82,88],"are":[39,57,72],"minimal":[41],"components":[43],"that":[44],"can":[45],"interact":[46],"with":[47],"receptors":[50],"to":[51],"stimulate":[52],"immune":[54],"system.":[55],"These":[56],"critical":[58],"antigens":[59],"protection":[61],"against":[62],"infectious":[63],"pathogens.":[64],"In":[65],"context":[67],"this":[69],"project,":[70],"we":[71],"developing":[73],"an":[74],"epitope-based":[75],"multipathogen":[76],"prophylactic":[77],"based":[79],"on":[80],"defined":[81],"F.":[84],"tularensis":[85],"new":[87],"Burkholderia":[90,92,95],"pseudomallei,":[91],"mallei,":[93],"cepaciae.":[96]},"counts_by_year":[],"updated_date":"2026-07-29T14:22:42.915294","created_date":"2025-10-10T00:00:00"}
