{"id":"https://openalex.org/W2026729478","doi":"https://doi.org/10.1145/1854776.1854861","title":"Ontology for MicroRNA Target prediction in human cancer","display_name":"Ontology for MicroRNA Target prediction in human cancer","publication_year":2010,"publication_date":"2010-08-02","ids":{"openalex":"https://openalex.org/W2026729478","doi":"https://doi.org/10.1145/1854776.1854861","mag":"2026729478"},"language":"en","primary_location":{"id":"doi:10.1145/1854776.1854861","is_oa":false,"landing_page_url":"https://doi.org/10.1145/1854776.1854861","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the First ACM International Conference on Bioinformatics and Computational Biology","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5103191466","display_name":"Jingshan Huang","orcid":"https://orcid.org/0000-0003-2408-2883"},"institutions":[{"id":"https://openalex.org/I83809506","display_name":"University of South Alabama","ror":"https://ror.org/01s7b5y08","country_code":"US","type":"education","lineage":["https://openalex.org/I83809506"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jingshan Huang","raw_affiliation_strings":["University of South Alabama, Mobile, AL"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of South Alabama, Mobile, AL","institution_ids":["https://openalex.org/I83809506"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029461308","display_name":"Ming Tan","orcid":"https://orcid.org/0000-0001-6565-699X"},"institutions":[{"id":"https://openalex.org/I83809506","display_name":"University of South Alabama","ror":"https://ror.org/01s7b5y08","country_code":"US","type":"education","lineage":["https://openalex.org/I83809506"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ming Tan","raw_affiliation_strings":["University of South Alabama, Mobile, AL"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of South Alabama, Mobile, AL","institution_ids":["https://openalex.org/I83809506"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066063885","display_name":"Dejing Dou","orcid":"https://orcid.org/0000-0001-7561-1672"},"institutions":[{"id":"https://openalex.org/I181233156","display_name":"University of Oregon","ror":"https://ror.org/0293rh119","country_code":"US","type":"education","lineage":["https://openalex.org/I181233156"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Dejing Dou","raw_affiliation_strings":["University of Oregon, Eugene, OR"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Oregon, Eugene, OR","institution_ids":["https://openalex.org/I181233156"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007019142","display_name":"Lei He","orcid":"https://orcid.org/0000-0002-9875-9853"},"institutions":[{"id":"https://openalex.org/I1299303238","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Lei He","raw_affiliation_strings":["National Institutes of Health, Bethesda, MD","National Institutes of Health, Bethesda MD#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Institutes of Health, Bethesda, MD","institution_ids":["https://openalex.org/I1299303238"]},{"raw_affiliation_string":"National Institutes of Health, Bethesda MD#TAB#","institution_ids":["https://openalex.org/I1299303238"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011566447","display_name":"Christopher Townsend","orcid":"https://orcid.org/0000-0003-4620-0924"},"institutions":[{"id":"https://openalex.org/I83809506","display_name":"University of South Alabama","ror":"https://ror.org/01s7b5y08","country_code":"US","type":"education","lineage":["https://openalex.org/I83809506"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Christopher Townsend","raw_affiliation_strings":["University of South Alabama, Mobile, AL"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of South Alabama, Mobile, AL","institution_ids":["https://openalex.org/I83809506"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5083236989","display_name":"Patrick J. Hayes","orcid":"https://orcid.org/0000-0002-6639-9187"},"institutions":[{"id":"https://openalex.org/I1335578998","display_name":"Florida Institute for Human and Machine Cognition","ror":"https://ror.org/02napvw46","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1335578998"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Patrick J. Hayes","raw_affiliation_strings":["Institute for Human and Machine Cognition, Pensacola, FL"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Human and Machine Cognition, Pensacola, FL","institution_ids":["https://openalex.org/I1335578998"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":3.1284,"has_fulltext":false,"cited_by_count":6,"citation_normalized_percentile":{"value":0.90882353,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":null,"issue":null,"first_page":"472","last_page":"474"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9898999929428101,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.7043097019195557},{"id":"https://openalex.org/keywords/informatics","display_name":"Informatics","score":0.6667629480361938},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.6585562229156494},{"id":"https://openalex.org/keywords/microrna","display_name":"microRNA","score":0.6394808292388916},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6087192296981812},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.5504291653633118},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.542875349521637},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.4487454295158386},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3711400032043457},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.15892258286476135},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.1573592722415924},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.15662041306495667},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.10218232870101929}],"concepts":[{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.7043097019195557},{"id":"https://openalex.org/C191630685","wikidata":"https://www.wikidata.org/wiki/Q4027615","display_name":"Informatics","level":2,"score":0.6667629480361938},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.6585562229156494},{"id":"https://openalex.org/C145059251","wikidata":"https://www.wikidata.org/wiki/Q310899","display_name":"microRNA","level":3,"score":0.6394808292388916},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6087192296981812},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.5504291653633118},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.542875349521637},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.4487454295158386},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3711400032043457},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.15892258286476135},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.1573592722415924},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.15662041306495667},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.10218232870101929},{"id":"https://openalex.org/C201995342","wikidata":"https://www.wikidata.org/wiki/Q682496","display_name":"Systems engineering","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C119599485","wikidata":"https://www.wikidata.org/wiki/Q43035","display_name":"Electrical engineering","level":1,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/1854776.1854861","is_oa":false,"landing_page_url":"https://doi.org/10.1145/1854776.1854861","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the First ACM International Conference on Bioinformatics and Computational Biology","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":7,"referenced_works":["https://openalex.org/W1856793913","https://openalex.org/W1890374229","https://openalex.org/W1920303762","https://openalex.org/W2045842462","https://openalex.org/W2118473681","https://openalex.org/W2146138309","https://openalex.org/W2154793065"],"related_works":["https://openalex.org/W2737319532","https://openalex.org/W3151405604","https://openalex.org/W2565797512","https://openalex.org/W2003333417","https://openalex.org/W2050308539","https://openalex.org/W2793648706","https://openalex.org/W2019096591","https://openalex.org/W3032012916","https://openalex.org/W3043187607","https://openalex.org/W1744006947"],"abstract_inverted_index":{"The":[0,56],"identification":[1],"and":[2,21,71],"characterization":[3],"of":[4,24,66],"important":[5,64],"roles":[6,65],"microRNAs":[7],"(miRNAs)":[8],"played":[9],"in":[10,18,62,68,76],"human":[11,69],"cancer":[12,33,82],"is":[13],"an":[14,37],"increasingly":[15],"active":[16],"area":[17],"medical":[19],"informatics,":[20],"the":[22,43],"prediction":[23],"miRNA":[25],"target":[26],"genes":[27],"remains":[28],"a":[29],"challenging":[30],"task":[31],"to":[32,49,59,73],"researchers.":[34],"We":[35],"propose":[36],"innovative":[38],"computing":[39],"framework":[40],"based":[41],"on":[42],"Ontology":[44],"for":[45],"MicroRNA":[46],"Target":[47],"(OMIT)":[48],"facilitate":[50],"knowledge":[51],"acquisition":[52],"from":[53],"existing":[54],"sources.":[55],"project":[57],"aims":[58],"assist":[60],"biologists":[61],"unraveling":[63],"miRNAs":[67],"cancer,":[70],"thus":[72],"help":[74],"clinicians":[75],"making":[77],"sound":[78],"decisions":[79],"when":[80],"treating":[81],"patients.":[83]},"counts_by_year":[{"year":2020,"cited_by_count":2},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":1}],"updated_date":"2026-07-29T14:22:42.915294","created_date":"2025-10-10T00:00:00"}
