{"id":"https://openalex.org/W2020652317","doi":"https://doi.org/10.1145/1854776.1854815","title":"Differential biclustering for gene expression analysis","display_name":"Differential biclustering for gene expression analysis","publication_year":2010,"publication_date":"2010-08-02","ids":{"openalex":"https://openalex.org/W2020652317","doi":"https://doi.org/10.1145/1854776.1854815","mag":"2020652317"},"language":"en","primary_location":{"id":"doi:10.1145/1854776.1854815","is_oa":false,"landing_page_url":"https://doi.org/10.1145/1854776.1854815","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the First ACM International Conference on Bioinformatics and Computational Biology","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5017889995","display_name":"Omar Odibat","orcid":null},"institutions":[{"id":"https://openalex.org/I185443292","display_name":"Wayne State University","ror":"https://ror.org/01070mq45","country_code":"US","type":"education","lineage":["https://openalex.org/I185443292"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Omar Odibat","raw_affiliation_strings":["Wayne State University, Detroit, MI"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Wayne State University, Detroit, MI","institution_ids":["https://openalex.org/I185443292"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001022750","display_name":"Chandan K. Reddy","orcid":"https://orcid.org/0000-0003-2839-3662"},"institutions":[{"id":"https://openalex.org/I185443292","display_name":"Wayne State University","ror":"https://ror.org/01070mq45","country_code":"US","type":"education","lineage":["https://openalex.org/I185443292"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Chandan K. Reddy","raw_affiliation_strings":["Wayne State University, Detroit, MI"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Wayne State University, Detroit, MI","institution_ids":["https://openalex.org/I185443292"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5000319047","display_name":"Craig N. Giroux","orcid":null},"institutions":[{"id":"https://openalex.org/I185443292","display_name":"Wayne State University","ror":"https://ror.org/01070mq45","country_code":"US","type":"education","lineage":["https://openalex.org/I185443292"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Craig N. Giroux","raw_affiliation_strings":["Wayne State University, Detroit, MI"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Wayne State University, Detroit, MI","institution_ids":["https://openalex.org/I185443292"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I185443292"],"apc_list":null,"apc_paid":null,"fwci":8.3125,"has_fulltext":false,"cited_by_count":14,"citation_normalized_percentile":{"value":0.9795022,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":null,"issue":null,"first_page":"275","last_page":"284"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9957000017166138,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9775999784469604,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biclustering","display_name":"Biclustering","score":0.9386343955993652},{"id":"https://openalex.org/keywords/differential","display_name":"Differential (mechanical device)","score":0.5731297135353088},{"id":"https://openalex.org/keywords/differential-evolution","display_name":"Differential evolution","score":0.5333516597747803},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.5223271250724792},{"id":"https://openalex.org/keywords/microarray-analysis-techniques","display_name":"Microarray analysis techniques","score":0.5200357437133789},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.48892584443092346},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.43982136249542236},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4241235852241516},{"id":"https://openalex.org/keywords/expression","display_name":"Expression (computer science)","score":0.4155486226081848},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.40737462043762207},{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.3756243586540222},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.3641519844532013},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2966025173664093},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.29488635063171387},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.21719303727149963},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.20219385623931885}],"concepts":[{"id":"https://openalex.org/C144817290","wikidata":"https://www.wikidata.org/wiki/Q2976575","display_name":"Biclustering","level":5,"score":0.9386343955993652},{"id":"https://openalex.org/C93226319","wikidata":"https://www.wikidata.org/wiki/Q193137","display_name":"Differential (mechanical device)","level":2,"score":0.5731297135353088},{"id":"https://openalex.org/C74750220","wikidata":"https://www.wikidata.org/wiki/Q2662197","display_name":"Differential evolution","level":2,"score":0.5333516597747803},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5223271250724792},{"id":"https://openalex.org/C8415881","wikidata":"https://www.wikidata.org/wiki/Q6839217","display_name":"Microarray analysis techniques","level":4,"score":0.5200357437133789},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.48892584443092346},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.43982136249542236},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4241235852241516},{"id":"https://openalex.org/C90559484","wikidata":"https://www.wikidata.org/wiki/Q778379","display_name":"Expression (computer science)","level":2,"score":0.4155486226081848},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.40737462043762207},{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.3756243586540222},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.3641519844532013},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2966025173664093},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.29488635063171387},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.21719303727149963},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.20219385623931885},{"id":"https://openalex.org/C94641424","wikidata":"https://www.wikidata.org/wiki/Q5172845","display_name":"Correlation clustering","level":3,"score":0.0},{"id":"https://openalex.org/C146978453","wikidata":"https://www.wikidata.org/wiki/Q3798668","display_name":"Aerospace engineering","level":1,"score":0.0},{"id":"https://openalex.org/C33704608","wikidata":"https://www.wikidata.org/wiki/Q5014717","display_name":"CURE data clustering algorithm","level":4,"score":0.0},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1145/1854776.1854815","is_oa":false,"landing_page_url":"https://doi.org/10.1145/1854776.1854815","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the First ACM International Conference on Bioinformatics and Computational Biology","raw_type":"proceedings-article"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.467.3188","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.467.3188","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://dmkd.cs.wayne.edu/Papers/BCB10.pdf","raw_type":"text"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":19,"referenced_works":["https://openalex.org/W1493217831","https://openalex.org/W2008459449","https://openalex.org/W2022079566","https://openalex.org/W2037400115","https://openalex.org/W2054966761","https://openalex.org/W2058849889","https://openalex.org/W2090257125","https://openalex.org/W2119015226","https://openalex.org/W2121463966","https://openalex.org/W2121905508","https://openalex.org/W2130410032","https://openalex.org/W2136107412","https://openalex.org/W2136988691","https://openalex.org/W2143274936","https://openalex.org/W2144544802","https://openalex.org/W2144792853","https://openalex.org/W2158219396","https://openalex.org/W2412058973","https://openalex.org/W3157439875"],"related_works":["https://openalex.org/W1974340769","https://openalex.org/W2900595096","https://openalex.org/W4289277241","https://openalex.org/W2979322793","https://openalex.org/W2765801824","https://openalex.org/W2188068678","https://openalex.org/W2157302779","https://openalex.org/W4327795753","https://openalex.org/W1919182074","https://openalex.org/W2911626693"],"abstract_inverted_index":{"Biclustering":[0,51],"algorithms":[1],"have":[2],"been":[3],"successfully":[4],"used":[5],"to":[6,23,53,66,93],"find":[7],"subsets":[8,13],"of":[9,14,28,34,68,91,108,117],"co-expressed":[10],"genes":[11,30,73,92],"under":[12],"conditions.":[15],"In":[16,42],"some":[17],"cases,":[18],"microarray":[19],"experiments":[20,127],"are":[21,134],"performed":[22],"compare":[24],"the":[25,29,58,63,69,101,106,109,114,130],"biological":[26],"activities":[27],"between":[31],"two":[32,70,86,102],"classes":[33],"cells,":[35],"such":[36],"as":[37,96],"normal":[38],"and":[39,123,137],"cancer":[40],"cells.":[41],"this":[43],"paper,":[44],"we":[45,112],"propose":[46],"DiBiCLUS,":[47],"a":[48,97],"novel":[49],"Differential":[50],"algorithm,":[52,111],"identify":[54],"differential":[55,76,98,132],"biclusters":[56,77,133],"from":[57],"gene":[59],"expression":[60],"data":[61],"where":[62],"samples":[64],"belong":[65],"one":[67],"classes.":[71,103],"The":[72],"in":[74],"these":[75],"can":[78],"be":[79,94],"positively":[80],"or":[81],"negatively":[82],"co-expressed.":[83],"We":[84],"introduce":[85],"criteria":[87],"for":[88],"any":[89],"pair":[90,99],"considered":[95],"across":[100],"To":[104],"illustrate":[105],"performance":[107],"proposed":[110],"present":[113],"experimental":[115],"results":[116],"applying":[118],"DiBiCLUS":[119],"algorithm":[120],"on":[121],"synthetic":[122],"reallife":[124],"datasets.":[125],"These":[126],"show":[128],"that":[129],"identified":[131],"both":[135],"statistically":[136],"biologically":[138],"significant.":[139]},"counts_by_year":[{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":2},{"year":2012,"cited_by_count":3}],"updated_date":"2026-07-29T14:22:42.915294","created_date":"2025-10-10T00:00:00"}
