{"id":"https://openalex.org/W2057514122","doi":"https://doi.org/10.1145/1854776.1854814","title":"Comparative analysis of biclustering algorithms","display_name":"Comparative analysis of biclustering algorithms","publication_year":2010,"publication_date":"2010-08-02","ids":{"openalex":"https://openalex.org/W2057514122","doi":"https://doi.org/10.1145/1854776.1854814","mag":"2057514122"},"language":"en","primary_location":{"id":"doi:10.1145/1854776.1854814","is_oa":false,"landing_page_url":"https://doi.org/10.1145/1854776.1854814","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the First ACM International Conference on Bioinformatics and Computational Biology","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5008376823","display_name":"Doruk Bozda\u011f","orcid":null},"institutions":[{"id":"https://openalex.org/I52357470","display_name":"The Ohio State University","ror":"https://ror.org/00rs6vg23","country_code":"US","type":"education","lineage":["https://openalex.org/I52357470"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Doruk Bozda\u011f","raw_affiliation_strings":["The Ohio State University","the Ohio State University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The Ohio State University","institution_ids":["https://openalex.org/I52357470"]},{"raw_affiliation_string":"the Ohio State University","institution_ids":["https://openalex.org/I52357470"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062304915","display_name":"Ashwin S. Kumar","orcid":"https://orcid.org/0000-0003-3251-9977"},"institutions":[{"id":"https://openalex.org/I52357470","display_name":"The Ohio State University","ror":"https://ror.org/00rs6vg23","country_code":"US","type":"education","lineage":["https://openalex.org/I52357470"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ashwin S. Kumar","raw_affiliation_strings":["The Ohio State University","the Ohio State University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The Ohio State University","institution_ids":["https://openalex.org/I52357470"]},{"raw_affiliation_string":"the Ohio State University","institution_ids":["https://openalex.org/I52357470"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5026046737","display_name":"\u00dcmit V. \u00c7ataly\u00fcrek","orcid":"https://orcid.org/0000-0002-5625-3758"},"institutions":[{"id":"https://openalex.org/I52357470","display_name":"The Ohio State University","ror":"https://ror.org/00rs6vg23","country_code":"US","type":"education","lineage":["https://openalex.org/I52357470"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Umit V. Catalyurek","raw_affiliation_strings":["The Ohio State University","the Ohio State University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The Ohio State University","institution_ids":["https://openalex.org/I52357470"]},{"raw_affiliation_string":"the Ohio State University","institution_ids":["https://openalex.org/I52357470"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I52357470"],"apc_list":null,"apc_paid":null,"fwci":6.4654,"has_fulltext":false,"cited_by_count":54,"citation_normalized_percentile":{"value":0.96920821,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":91,"max":99},"biblio":{"volume":null,"issue":null,"first_page":"265","last_page":"274"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9965999722480774,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11975","display_name":"Evolutionary Algorithms and Applications","score":0.991599977016449,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biclustering","display_name":"Biclustering","score":0.9515970945358276},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7782076597213745},{"id":"https://openalex.org/keywords/relevance","display_name":"Relevance (law)","score":0.6670703887939453},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.6213181018829346},{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.589231014251709},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.5167797803878784},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.4915989339351654},{"id":"https://openalex.org/keywords/testbed","display_name":"Testbed","score":0.47401174902915955},{"id":"https://openalex.org/keywords/algorithm-design","display_name":"Algorithm design","score":0.44228124618530273},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.352786660194397},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.3526903986930847}],"concepts":[{"id":"https://openalex.org/C144817290","wikidata":"https://www.wikidata.org/wiki/Q2976575","display_name":"Biclustering","level":5,"score":0.9515970945358276},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7782076597213745},{"id":"https://openalex.org/C158154518","wikidata":"https://www.wikidata.org/wiki/Q7310970","display_name":"Relevance (law)","level":2,"score":0.6670703887939453},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.6213181018829346},{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.589231014251709},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.5167797803878784},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.4915989339351654},{"id":"https://openalex.org/C31395832","wikidata":"https://www.wikidata.org/wiki/Q1318674","display_name":"Testbed","level":2,"score":0.47401174902915955},{"id":"https://openalex.org/C106516650","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm design","level":2,"score":0.44228124618530273},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.352786660194397},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3526903986930847},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C94641424","wikidata":"https://www.wikidata.org/wiki/Q5172845","display_name":"Correlation clustering","level":3,"score":0.0},{"id":"https://openalex.org/C33704608","wikidata":"https://www.wikidata.org/wiki/Q5014717","display_name":"CURE data clustering algorithm","level":4,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/1854776.1854814","is_oa":false,"landing_page_url":"https://doi.org/10.1145/1854776.1854814","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the First ACM International Conference on Bioinformatics and Computational Biology","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.6399999856948853,"id":"https://metadata.un.org/sdg/16","display_name":"Peace, Justice and strong institutions"}],"awards":[{"id":"https://openalex.org/G4744983489","display_name":null,"funder_award_id":"CNS-0643969OCI-0904809OCI-0904802CNS-0403342","funder_id":"https://openalex.org/F4320337388","funder_display_name":"Division of Computer and Network Systems"},{"id":"https://openalex.org/G5285988562","display_name":null,"funder_award_id":"DE-FC02-06ER2775","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G7150816015","display_name":null,"funder_award_id":"R01 CA141090","funder_id":"https://openalex.org/F4320337351","funder_display_name":"National Cancer Institute"},{"id":"https://openalex.org/G7250484797","display_name":null,"funder_award_id":"CNS-0643969OCI-0904809OCI-0904802CNS-0403342","funder_id":"https://openalex.org/F4320337377","funder_display_name":"Office of Advanced Cyberinfrastructure"}],"funders":[{"id":"https://openalex.org/F4320306084","display_name":"U.S. Department of Energy","ror":"https://ror.org/01bj3aw27"},{"id":"https://openalex.org/F4320337351","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81"},{"id":"https://openalex.org/F4320337377","display_name":"Office of Advanced Cyberinfrastructure","ror":"https://ror.org/04nh1dc89"},{"id":"https://openalex.org/F4320337388","display_name":"Division of Computer and Network Systems","ror":"https://ror.org/02rdzmk74"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":28,"referenced_works":["https://openalex.org/W8921818","https://openalex.org/W196542726","https://openalex.org/W601394182","https://openalex.org/W1493217831","https://openalex.org/W1601634089","https://openalex.org/W1964854862","https://openalex.org/W1977556410","https://openalex.org/W1983524036","https://openalex.org/W2008459449","https://openalex.org/W2020541351","https://openalex.org/W2058849889","https://openalex.org/W2064787891","https://openalex.org/W2099058255","https://openalex.org/W2105883975","https://openalex.org/W2119282901","https://openalex.org/W2121936281","https://openalex.org/W2130158951","https://openalex.org/W2136107412","https://openalex.org/W2137167578","https://openalex.org/W2138612638","https://openalex.org/W2143065952","https://openalex.org/W2144544802","https://openalex.org/W2154664365","https://openalex.org/W2229908198","https://openalex.org/W2487552258","https://openalex.org/W6629329278","https://openalex.org/W6680568974","https://openalex.org/W6682764353"],"related_works":["https://openalex.org/W2883256816","https://openalex.org/W2171408034","https://openalex.org/W3003320923","https://openalex.org/W2106140982","https://openalex.org/W2152313554","https://openalex.org/W3048672182","https://openalex.org/W1974340769","https://openalex.org/W1509300825","https://openalex.org/W2054620577","https://openalex.org/W2611629964"],"abstract_inverted_index":{"Biclustering":[0],"is":[1,31],"a":[2,25,40,112,127],"very":[3],"popular":[4],"method":[5],"to":[6,19,34,37,80,102,116],"identify":[7,103],"hidden":[8],"co-regulation":[9],"patterns":[10,77,89],"among":[11],"genes.":[12],"There":[13],"are":[14],"numerous":[15],"biclustering":[16,70,96],"algorithms":[17,30,71,97],"designed":[18,114],"undertake":[20],"this":[21,56,60],"challenging":[22],"task,":[23],"however,":[24],"thorough":[26],"comparison":[27],"between":[28],"these":[29],"even":[32],"harder":[33],"accomplish":[35],"due":[36],"lack":[38],"of":[39,52,74,120,129,137],"ground":[41],"truth":[42],"and":[43,50,66,90],"large":[44],"variety":[45],"in":[46,72],"the":[47,53,75,85,92,118,121,134],"search":[48,123],"strategies":[49],"objectives":[51],"algorithms.":[54],"In":[55],"paper,":[57],"we":[58,132],"address":[59],"less":[61],"studied,":[62],"yet":[63],"important":[64],"problem":[65],"formally":[67],"analyze":[68],"several":[69],"terms":[73],"bicluster":[76],"they":[78],"attempt":[79],"discover.":[81],"We":[82,106],"systematically":[83],"formulate":[84],"requirements":[86],"for":[87],"well-known":[88],"show":[91],"constraints":[93],"imposed":[94],"by":[95,140],"that":[98],"determine":[99],"their":[100],"capacity":[101],"such":[104],"patterns.":[105],"also":[107],"give":[108],"experimental":[109],"results":[110],"from":[111],"carefully":[113],"testbed":[115],"evaluate":[117],"power":[119],"employed":[122],"strategies.":[124],"Furthermore,":[125],"on":[126],"set":[128],"real":[130],"datasets,":[131],"report":[133],"biological":[135],"relevance":[136],"clusters":[138],"identified":[139],"each":[141],"algorithm.":[142]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":4},{"year":2018,"cited_by_count":5},{"year":2017,"cited_by_count":4},{"year":2016,"cited_by_count":4},{"year":2015,"cited_by_count":10},{"year":2014,"cited_by_count":8},{"year":2013,"cited_by_count":5},{"year":2012,"cited_by_count":2}],"updated_date":"2026-08-01T09:00:35.917206","created_date":"2025-10-10T00:00:00"}