{"id":"https://openalex.org/W2058074003","doi":"https://doi.org/10.1145/1851476.1851552","title":"Text mining for bone biology","display_name":"Text mining for bone biology","publication_year":2010,"publication_date":"2010-06-21","ids":{"openalex":"https://openalex.org/W2058074003","doi":"https://doi.org/10.1145/1851476.1851552","mag":"2058074003"},"language":"en","primary_location":{"id":"doi:10.1145/1851476.1851552","is_oa":false,"landing_page_url":"https://doi.org/10.1145/1851476.1851552","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 19th ACM International Symposium on High Performance Distributed Computing","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5112491772","display_name":"Andrew Hoblitzell","orcid":null},"institutions":[{"id":"https://openalex.org/I135191193","display_name":"University of Indianapolis","ror":"https://ror.org/052133d12","country_code":"US","type":"education","lineage":["https://openalex.org/I135191193"]},{"id":"https://openalex.org/I55769427","display_name":"Indiana University \u2013 Purdue University Indianapolis","ror":"https://ror.org/05gxnyn08","country_code":"US","type":"education","lineage":["https://openalex.org/I55769427","https://openalex.org/I592451"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Andrew Hoblitzell","raw_affiliation_strings":["Indiana University -- Purdue University Indianapolis, Indianapolis, Indiana","Indiana University - Purdue University Indianapolis, Indianapolis, Indiana#TAB#"],"affiliations":[{"raw_affiliation_string":"Indiana University -- Purdue University Indianapolis, Indianapolis, Indiana","institution_ids":["https://openalex.org/I135191193","https://openalex.org/I55769427"]},{"raw_affiliation_string":"Indiana University - Purdue University Indianapolis, Indianapolis, Indiana#TAB#","institution_ids":["https://openalex.org/I55769427"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5106085532","display_name":"Snehasis Mukhopadhyay","orcid":null},"institutions":[{"id":"https://openalex.org/I135191193","display_name":"University of Indianapolis","ror":"https://ror.org/052133d12","country_code":"US","type":"education","lineage":["https://openalex.org/I135191193"]},{"id":"https://openalex.org/I55769427","display_name":"Indiana University \u2013 Purdue University Indianapolis","ror":"https://ror.org/05gxnyn08","country_code":"US","type":"education","lineage":["https://openalex.org/I55769427","https://openalex.org/I592451"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Snehasis Mukhopadhyay","raw_affiliation_strings":["Indiana University -- Purdue University Indianapolis, Indianapolis, Indiana","Indiana University - Purdue University Indianapolis, Indianapolis, Indiana#TAB#"],"affiliations":[{"raw_affiliation_string":"Indiana University -- Purdue University Indianapolis, Indianapolis, Indiana","institution_ids":["https://openalex.org/I135191193","https://openalex.org/I55769427"]},{"raw_affiliation_string":"Indiana University - Purdue University Indianapolis, Indianapolis, Indiana#TAB#","institution_ids":["https://openalex.org/I55769427"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101538499","display_name":"Qian You","orcid":"https://orcid.org/0000-0003-1034-036X"},"institutions":[{"id":"https://openalex.org/I55769427","display_name":"Indiana University \u2013 Purdue University Indianapolis","ror":"https://ror.org/05gxnyn08","country_code":"US","type":"education","lineage":["https://openalex.org/I55769427","https://openalex.org/I592451"]},{"id":"https://openalex.org/I135191193","display_name":"University of Indianapolis","ror":"https://ror.org/052133d12","country_code":"US","type":"education","lineage":["https://openalex.org/I135191193"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Qian You","raw_affiliation_strings":["Indiana University -- Purdue University Indianapolis, Indianapolis, Indiana","Indiana University - Purdue University Indianapolis, Indianapolis, Indiana#TAB#"],"affiliations":[{"raw_affiliation_string":"Indiana University -- Purdue University Indianapolis, Indianapolis, Indiana","institution_ids":["https://openalex.org/I135191193","https://openalex.org/I55769427"]},{"raw_affiliation_string":"Indiana University - Purdue University Indianapolis, Indianapolis, Indiana#TAB#","institution_ids":["https://openalex.org/I55769427"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004575115","display_name":"Shiaofen Fang","orcid":"https://orcid.org/0000-0001-8277-5202"},"institutions":[{"id":"https://openalex.org/I55769427","display_name":"Indiana University \u2013 Purdue University Indianapolis","ror":"https://ror.org/05gxnyn08","country_code":"US","type":"education","lineage":["https://openalex.org/I55769427","https://openalex.org/I592451"]},{"id":"https://openalex.org/I135191193","display_name":"University of Indianapolis","ror":"https://ror.org/052133d12","country_code":"US","type":"education","lineage":["https://openalex.org/I135191193"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Shiaofen Fang","raw_affiliation_strings":["Indiana University -- Purdue University Indianapolis, Indianapolis, Indiana","Indiana University - Purdue University Indianapolis, Indianapolis, Indiana#TAB#"],"affiliations":[{"raw_affiliation_string":"Indiana University -- Purdue University Indianapolis, Indianapolis, Indiana","institution_ids":["https://openalex.org/I135191193","https://openalex.org/I55769427"]},{"raw_affiliation_string":"Indiana University - Purdue University Indianapolis, Indianapolis, Indiana#TAB#","institution_ids":["https://openalex.org/I55769427"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050333023","display_name":"Yuni Xia","orcid":"https://orcid.org/0000-0002-9569-1355"},"institutions":[{"id":"https://openalex.org/I135191193","display_name":"University of Indianapolis","ror":"https://ror.org/052133d12","country_code":"US","type":"education","lineage":["https://openalex.org/I135191193"]},{"id":"https://openalex.org/I55769427","display_name":"Indiana University \u2013 Purdue University Indianapolis","ror":"https://ror.org/05gxnyn08","country_code":"US","type":"education","lineage":["https://openalex.org/I55769427","https://openalex.org/I592451"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yuni Xia","raw_affiliation_strings":["Indiana University -- Purdue University Indianapolis, Indianapolis, Indiana","Indiana University - Purdue University Indianapolis, Indianapolis, Indiana#TAB#"],"affiliations":[{"raw_affiliation_string":"Indiana University -- Purdue University Indianapolis, Indianapolis, Indiana","institution_ids":["https://openalex.org/I135191193","https://openalex.org/I55769427"]},{"raw_affiliation_string":"Indiana University - Purdue University Indianapolis, Indianapolis, Indiana#TAB#","institution_ids":["https://openalex.org/I55769427"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5049230451","display_name":"Joseph P. Bidwell","orcid":"https://orcid.org/0000-0001-8886-6842"},"institutions":[{"id":"https://openalex.org/I55769427","display_name":"Indiana University \u2013 Purdue University Indianapolis","ror":"https://ror.org/05gxnyn08","country_code":"US","type":"education","lineage":["https://openalex.org/I55769427","https://openalex.org/I592451"]},{"id":"https://openalex.org/I135191193","display_name":"University of Indianapolis","ror":"https://ror.org/052133d12","country_code":"US","type":"education","lineage":["https://openalex.org/I135191193"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Joseph Bidwell","raw_affiliation_strings":["Indiana University -- Purdue University Indianapolis, Indianapolis, Indiana","Indiana University - Purdue University Indianapolis, Indianapolis, Indiana#TAB#"],"affiliations":[{"raw_affiliation_string":"Indiana University -- Purdue University Indianapolis, Indianapolis, Indiana","institution_ids":["https://openalex.org/I135191193","https://openalex.org/I55769427"]},{"raw_affiliation_string":"Indiana University - Purdue University Indianapolis, Indianapolis, Indiana#TAB#","institution_ids":["https://openalex.org/I55769427"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5112491772"],"corresponding_institution_ids":["https://openalex.org/I135191193","https://openalex.org/I55769427"],"apc_list":null,"apc_paid":null,"fwci":0.5422,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.66224636,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"11","issue":null,"first_page":"522","last_page":"530"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9700999855995178,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9661999940872192,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5680189728736877},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.39975330233573914},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.38533514738082886},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.3431095480918884},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.25454211235046387}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5680189728736877},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.39975330233573914},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.38533514738082886},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.3431095480918884},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.25454211235046387}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1145/1851476.1851552","is_oa":false,"landing_page_url":"https://doi.org/10.1145/1851476.1851552","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 19th ACM International Symposium on High Performance Distributed Computing","raw_type":"proceedings-article"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.226.7955","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.226.7955","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://salsahpc.indiana.edu/ECMLS2010/papers/065.pdf","raw_type":"text"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3","score":0.7599999904632568}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":32,"referenced_works":["https://openalex.org/W129966672","https://openalex.org/W404181094","https://openalex.org/W1501129975","https://openalex.org/W1974701639","https://openalex.org/W1983453172","https://openalex.org/W1987685788","https://openalex.org/W1990923428","https://openalex.org/W1997485676","https://openalex.org/W2000461758","https://openalex.org/W2002531683","https://openalex.org/W2009685503","https://openalex.org/W2024030746","https://openalex.org/W2042007405","https://openalex.org/W2055238138","https://openalex.org/W2061860783","https://openalex.org/W2086412549","https://openalex.org/W2096146054","https://openalex.org/W2104734478","https://openalex.org/W2104768328","https://openalex.org/W2109070394","https://openalex.org/W2118781674","https://openalex.org/W2149342630","https://openalex.org/W2150515303","https://openalex.org/W2152183901","https://openalex.org/W2163956552","https://openalex.org/W2314420468","https://openalex.org/W2752885492","https://openalex.org/W3004540582","https://openalex.org/W4213060883","https://openalex.org/W4244074356","https://openalex.org/W4285719527","https://openalex.org/W4388316905"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W2358668433","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W2382290278","https://openalex.org/W4395014643","https://openalex.org/W4391913857","https://openalex.org/W2350741829"],"abstract_inverted_index":{"Osteoporosis,":[0],"which":[1],"is":[2,31,65,112],"characterized":[3],"by":[4,33,84,169],"reduced":[5],"bone":[6],"mass":[7],"and":[8,42,54,62,95,99,135,168,195,212],"debilitating":[9],"fractures,":[10],"may":[11,81,158],"reach":[12],"epidemic":[13],"proportions":[14],"with":[15,122],"the":[16,19,34,85,93,109,123,147,210],"aging":[17],"of":[18,24,29,40,48,87,97,125,131,137,149,214],"US":[20],"population.":[21],"The":[22,37,116],"intensity":[23],"research":[25,56,75,155],"in":[26,77,108,143,153],"this":[27],"field":[28],"study":[30],"reflected":[32],"facts":[35],"that":[36,63],"American":[38],"Society":[39],"Bone":[41,79],"Mineral":[43],"Research":[44],"has":[45,118],"a":[46,207],"membership":[47],"nearly":[49],"4,000":[50],"physicians,":[51],"clinical":[52],"investigators,":[53],"basic":[55],"scientists":[57],"from":[58],"over":[59,69],"fifty":[60],"countries":[61],"NIH":[64],"expected":[66],"to":[67],"spend":[68],"200":[70],"million":[71],"dollars":[72],"on":[73],"osteoporosis":[74],"alone":[76],"2010.":[78],"biologists":[80],"be":[82,159,189,200],"overwhelmed":[83],"amount":[86],"literature":[88,111],"constantly":[89],"being":[90],"generated,":[91],"thus":[92],"identification":[94],"extraction":[96,211],"existing":[98,193],"novel":[100,175],"relationships":[101,138,198],"among":[102],"biological":[103,110,132,140,166],"entities":[104,141],"or":[105],"terms":[106],"appearing":[107,142],"an":[113],"ongoing":[114],"problem.":[115],"problem":[117],"become":[119],"more":[120],"pressing":[121],"development":[124],"large":[126],"online":[127],"publicly":[128],"available":[129],"databases":[130,145],"literature.":[133],"Extraction":[134],"visualization":[136,213],"between":[139],"these":[144],"offers":[146],"opportunity":[148],"keeping":[150],"researchers":[151],"up-to-date":[152],"their":[154],"domain.":[156],"This":[157,204],"achieved":[160],"through":[161,177],"helping":[162],"them":[163],"visualize":[164],"possible":[165,196],"pathways":[167],"generating":[170],"likely":[171],"new":[172,197],"hypotheses":[173],"concerning":[174],"interactions":[176],"methods":[178],"such":[179],"as":[180],"transitive":[181],"closure":[182],"network":[183],"flow.":[184],"All":[185],"generated":[186],"predictions":[187],"can":[188,199],"verified":[190,201],"against":[191,202],"already":[192],"data,":[194],"experiment.":[203],"paper":[205],"presents":[206],"method":[208],"for":[209],"potentially":[215],"meaningful":[216],"relationships.":[217]},"counts_by_year":[{"year":2016,"cited_by_count":1},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}
