{"id":"https://openalex.org/W2105609842","doi":"https://doi.org/10.1145/1687399.1687531","title":"Genetic design automation","display_name":"Genetic design automation","publication_year":2009,"publication_date":"2009-11-02","ids":{"openalex":"https://openalex.org/W2105609842","doi":"https://doi.org/10.1145/1687399.1687531","mag":"2105609842"},"language":"en","primary_location":{"id":"doi:10.1145/1687399.1687531","is_oa":false,"landing_page_url":"https://doi.org/10.1145/1687399.1687531","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 2009 International Conference on Computer-Aided Design","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5111386695","display_name":"Chris J. Myers","orcid":null},"institutions":[{"id":"https://openalex.org/I223532165","display_name":"University of Utah","ror":"https://ror.org/03r0ha626","country_code":"US","type":"education","lineage":["https://openalex.org/I223532165"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Chris J. Myers","raw_affiliation_strings":["University of Utah","University of Utah,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Utah","institution_ids":["https://openalex.org/I223532165"]},{"raw_affiliation_string":"University of Utah,","institution_ids":["https://openalex.org/I223532165"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016035561","display_name":"Nathan Barker","orcid":null},"institutions":[{"id":"https://openalex.org/I110496330","display_name":"Southern Utah University","ror":"https://ror.org/04gfeaw48","country_code":"US","type":"education","lineage":["https://openalex.org/I110496330"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Nathan Barker","raw_affiliation_strings":["Southern Utah University","[Southern Utah University]"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Southern Utah University","institution_ids":["https://openalex.org/I110496330"]},{"raw_affiliation_string":"[Southern Utah University]","institution_ids":["https://openalex.org/I110496330"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005997934","display_name":"Hiroyuki Kuwahara","orcid":"https://orcid.org/0000-0001-5333-6729"},"institutions":[{"id":"https://openalex.org/I74973139","display_name":"Carnegie Mellon University","ror":"https://ror.org/05x2bcf33","country_code":"US","type":"education","lineage":["https://openalex.org/I74973139"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hiroyuki Kuwahara","raw_affiliation_strings":["Carnegie Mellon University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Carnegie Mellon University","institution_ids":["https://openalex.org/I74973139"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021736807","display_name":"Kevin R. Jones","orcid":"https://orcid.org/0000-0002-3802-7562"},"institutions":[{"id":"https://openalex.org/I223532165","display_name":"University of Utah","ror":"https://ror.org/03r0ha626","country_code":"US","type":"education","lineage":["https://openalex.org/I223532165"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kevin Jones","raw_affiliation_strings":["University of Utah","University of Utah,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Utah","institution_ids":["https://openalex.org/I223532165"]},{"raw_affiliation_string":"University of Utah,","institution_ids":["https://openalex.org/I223532165"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047908665","display_name":"Curtis Madsen","orcid":"https://orcid.org/0000-0002-0254-0364"},"institutions":[{"id":"https://openalex.org/I223532165","display_name":"University of Utah","ror":"https://ror.org/03r0ha626","country_code":"US","type":"education","lineage":["https://openalex.org/I223532165"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Curtis Madsen","raw_affiliation_strings":["University of Utah","University of Utah,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Utah","institution_ids":["https://openalex.org/I223532165"]},{"raw_affiliation_string":"University of Utah,","institution_ids":["https://openalex.org/I223532165"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5040525401","display_name":"Nam Nguyen","orcid":"https://orcid.org/0000-0002-3932-063X"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Nam-Phuong D. Nguyen","raw_affiliation_strings":["University of Texas","University of texas"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Texas","institution_ids":[]},{"raw_affiliation_string":"University of texas","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.1369,"has_fulltext":false,"cited_by_count":12,"citation_normalized_percentile":{"value":0.55796395,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":null,"issue":null,"first_page":"713","last_page":"716"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10878","display_name":"CRISPR and Genetic Engineering","score":0.996999979019165,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9922000169754028,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/electronic-design-automation","display_name":"Electronic design automation","score":0.8584574460983276},{"id":"https://openalex.org/keywords/automation","display_name":"Automation","score":0.715953528881073},{"id":"https://openalex.org/keywords/computer-automated-design","display_name":"Computer-automated design","score":0.6421349048614502},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6225054860115051},{"id":"https://openalex.org/keywords/electronic-circuit","display_name":"Electronic circuit","score":0.5430530905723572},{"id":"https://openalex.org/keywords/circuit-design","display_name":"Circuit design","score":0.4853455126285553},{"id":"https://openalex.org/keywords/systems-engineering","display_name":"Systems engineering","score":0.42662811279296875},{"id":"https://openalex.org/keywords/electronics","display_name":"Electronics","score":0.410396933555603},{"id":"https://openalex.org/keywords/computer-architecture","display_name":"Computer architecture","score":0.3559799790382385},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.33132633566856384},{"id":"https://openalex.org/keywords/embedded-system","display_name":"Embedded system","score":0.30780303478240967},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.26311707496643066},{"id":"https://openalex.org/keywords/systems-design","display_name":"Systems design","score":0.2267322838306427},{"id":"https://openalex.org/keywords/electrical-engineering","display_name":"Electrical engineering","score":0.12529847025871277}],"concepts":[{"id":"https://openalex.org/C64260653","wikidata":"https://www.wikidata.org/wiki/Q1194864","display_name":"Electronic design automation","level":2,"score":0.8584574460983276},{"id":"https://openalex.org/C115901376","wikidata":"https://www.wikidata.org/wiki/Q184199","display_name":"Automation","level":2,"score":0.715953528881073},{"id":"https://openalex.org/C205976826","wikidata":"https://www.wikidata.org/wiki/Q5157390","display_name":"Computer-automated design","level":3,"score":0.6421349048614502},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6225054860115051},{"id":"https://openalex.org/C134146338","wikidata":"https://www.wikidata.org/wiki/Q1815901","display_name":"Electronic circuit","level":2,"score":0.5430530905723572},{"id":"https://openalex.org/C190560348","wikidata":"https://www.wikidata.org/wiki/Q3245116","display_name":"Circuit design","level":2,"score":0.4853455126285553},{"id":"https://openalex.org/C201995342","wikidata":"https://www.wikidata.org/wiki/Q682496","display_name":"Systems engineering","level":1,"score":0.42662811279296875},{"id":"https://openalex.org/C138331895","wikidata":"https://www.wikidata.org/wiki/Q11650","display_name":"Electronics","level":2,"score":0.410396933555603},{"id":"https://openalex.org/C118524514","wikidata":"https://www.wikidata.org/wiki/Q173212","display_name":"Computer architecture","level":1,"score":0.3559799790382385},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.33132633566856384},{"id":"https://openalex.org/C149635348","wikidata":"https://www.wikidata.org/wiki/Q193040","display_name":"Embedded system","level":1,"score":0.30780303478240967},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.26311707496643066},{"id":"https://openalex.org/C31352089","wikidata":"https://www.wikidata.org/wiki/Q3750474","display_name":"Systems design","level":2,"score":0.2267322838306427},{"id":"https://openalex.org/C119599485","wikidata":"https://www.wikidata.org/wiki/Q43035","display_name":"Electrical engineering","level":1,"score":0.12529847025871277},{"id":"https://openalex.org/C78519656","wikidata":"https://www.wikidata.org/wiki/Q101333","display_name":"Mechanical engineering","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/1687399.1687531","is_oa":false,"landing_page_url":"https://doi.org/10.1145/1687399.1687531","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 2009 International Conference on Computer-Aided Design","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.44999998807907104,"display_name":"Industry, innovation and infrastructure","id":"https://metadata.un.org/sdg/9"}],"awards":[{"id":"https://openalex.org/G2092655281","display_name":null,"funder_award_id":"0331270CCF07377655CCF-0916042","funder_id":"https://openalex.org/F4320337387","funder_display_name":"Division of Computing and Communication Foundations"}],"funders":[{"id":"https://openalex.org/F4320337387","display_name":"Division of Computing and Communication Foundations","ror":"https://ror.org/01mng8331"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":20,"referenced_works":["https://openalex.org/W35463602","https://openalex.org/W1577323490","https://openalex.org/W1645305843","https://openalex.org/W1837793956","https://openalex.org/W1842089573","https://openalex.org/W1890385119","https://openalex.org/W1946177469","https://openalex.org/W1974272479","https://openalex.org/W2011059230","https://openalex.org/W2034375827","https://openalex.org/W2078734278","https://openalex.org/W2134759932","https://openalex.org/W2149202606","https://openalex.org/W2155418451","https://openalex.org/W2159141156","https://openalex.org/W2171122589","https://openalex.org/W2172162088","https://openalex.org/W2527946216","https://openalex.org/W4298011152","https://openalex.org/W6601426829"],"related_works":["https://openalex.org/W2393282994","https://openalex.org/W3214257365","https://openalex.org/W2393908603","https://openalex.org/W1996645807","https://openalex.org/W2038083073","https://openalex.org/W2979361106","https://openalex.org/W2111898760","https://openalex.org/W2019954703","https://openalex.org/W2046521720","https://openalex.org/W1992128702"],"abstract_inverted_index":{"Electronic":[0],"design":[1,8,27,37],"automation":[2,28],"(EDA)":[3],"tools":[4,33],"have":[5],"facilitated":[6],"the":[7,23,41,51,69,75],"of":[9,25,55,77],"ever":[10],"more":[11],"complex":[12],"integrated":[13],"circuits":[14,39,49,57],"each":[15],"year.":[16],"Synthetic":[17],"biology":[18],"would":[19],"also":[20,59],"benefit":[21],"from":[22],"development":[24,76],"genetic":[26,38],"(GDA)":[29],"tools.":[30],"Existing":[31],"GDA":[32,80],"require":[34],"biologists":[35],"to":[36,46],"at":[40,50,61],"molecular":[42],"level,":[43],"roughly":[44],"equivalent":[45],"designing":[47],"electronic":[48],"layout":[52],"level.":[53,65],"Analysis":[54],"these":[56],"is":[58],"performed":[60],"this":[62],"very":[63],"low":[64],"This":[66],"paper":[67],"presents":[68],"background":[70],"and":[71,85],"issues":[72],"involved":[73],"in":[74],"such":[78],"a":[79],"tool":[81],"for":[82],"modeling,":[83],"analysis,":[84],"design.":[86]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":2},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":2},{"year":2014,"cited_by_count":2},{"year":2013,"cited_by_count":1}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}