{"id":"https://openalex.org/W2089994415","doi":"https://doi.org/10.1145/1655925.1656059","title":"Learning a prediction model for protein-protein recognition","display_name":"Learning a prediction model for protein-protein recognition","publication_year":2009,"publication_date":"2009-11-24","ids":{"openalex":"https://openalex.org/W2089994415","doi":"https://doi.org/10.1145/1655925.1656059","mag":"2089994415"},"language":"en","primary_location":{"id":"doi:10.1145/1655925.1656059","is_oa":false,"landing_page_url":"https://doi.org/10.1145/1655925.1656059","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 2nd International Conference on Interaction Sciences: Information Technology, Culture and Human","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5109268896","display_name":"Huang-Cheng Kuo","orcid":null},"institutions":[{"id":"https://openalex.org/I183570559","display_name":"National Chiayi University","ror":"https://ror.org/04gknbs13","country_code":"TW","type":"education","lineage":["https://openalex.org/I183570559"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Huang-Cheng Kuo","raw_affiliation_strings":["National Chiayi University, Chia-Yi City, Taiwan","National Chiayi University, Chia-Yi City, Taiwan#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Chiayi University, Chia-Yi City, Taiwan","institution_ids":["https://openalex.org/I183570559"]},{"raw_affiliation_string":"National Chiayi University, Chia-Yi City, Taiwan#TAB#","institution_ids":["https://openalex.org/I183570559"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026978877","display_name":"Kuan-Yu Su","orcid":null},"institutions":[{"id":"https://openalex.org/I183570559","display_name":"National Chiayi University","ror":"https://ror.org/04gknbs13","country_code":"TW","type":"education","lineage":["https://openalex.org/I183570559"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Kuan-Yu Su","raw_affiliation_strings":["National Chiayi University, Chia-Yi City, Taiwan","National Chiayi University, Chia-Yi City, Taiwan#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Chiayi University, Chia-Yi City, Taiwan","institution_ids":["https://openalex.org/I183570559"]},{"raw_affiliation_string":"National Chiayi University, Chia-Yi City, Taiwan#TAB#","institution_ids":["https://openalex.org/I183570559"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078423741","display_name":"Ping-Lin Ong","orcid":null},"institutions":[{"id":"https://openalex.org/I183570559","display_name":"National Chiayi University","ror":"https://ror.org/04gknbs13","country_code":"TW","type":"education","lineage":["https://openalex.org/I183570559"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Ping-Lin Ong","raw_affiliation_strings":["National Chiayi University, Chia-Yi City, Taiwan","National Chiayi University, Chia-Yi City, Taiwan#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Chiayi University, Chia-Yi City, Taiwan","institution_ids":["https://openalex.org/I183570559"]},{"raw_affiliation_string":"National Chiayi University, Chia-Yi City, Taiwan#TAB#","institution_ids":["https://openalex.org/I183570559"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5113652112","display_name":"Jen-Peng Huang","orcid":null},"institutions":[{"id":"https://openalex.org/I92582371","display_name":"Southern Taiwan University of Science and Technology","ror":"https://ror.org/0029n1t76","country_code":"TW","type":"education","lineage":["https://openalex.org/I92582371"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Jen-Peng Huang","raw_affiliation_strings":["Southern Taiwan University, Tainan County, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Southern Taiwan University, Tainan County, Taiwan","institution_ids":["https://openalex.org/I92582371"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"736","last_page":"741"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6314946413040161},{"id":"https://openalex.org/keywords/genetic-programming","display_name":"Genetic programming","score":0.5933568477630615},{"id":"https://openalex.org/keywords/protein\u2013protein-interaction","display_name":"Protein\u2013protein interaction","score":0.5928640961647034},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.557400643825531},{"id":"https://openalex.org/keywords/protein-function-prediction","display_name":"Protein function prediction","score":0.537247896194458},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.5016813278198242},{"id":"https://openalex.org/keywords/protein-function","display_name":"Protein function","score":0.42848700284957886},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.34314846992492676},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.33051785826683044},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.20232388377189636},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.09769418835639954},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.08187153935432434}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6314946413040161},{"id":"https://openalex.org/C110332635","wikidata":"https://www.wikidata.org/wiki/Q629498","display_name":"Genetic programming","level":2,"score":0.5933568477630615},{"id":"https://openalex.org/C11804247","wikidata":"https://www.wikidata.org/wiki/Q896177","display_name":"Protein\u2013protein interaction","level":2,"score":0.5928640961647034},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.557400643825531},{"id":"https://openalex.org/C207060522","wikidata":"https://www.wikidata.org/wiki/Q7251473","display_name":"Protein function prediction","level":4,"score":0.537247896194458},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.5016813278198242},{"id":"https://openalex.org/C2986374874","wikidata":"https://www.wikidata.org/wiki/Q8054","display_name":"Protein function","level":3,"score":0.42848700284957886},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.34314846992492676},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.33051785826683044},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.20232388377189636},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.09769418835639954},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.08187153935432434}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/1655925.1656059","is_oa":false,"landing_page_url":"https://doi.org/10.1145/1655925.1656059","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 2nd International Conference on Interaction Sciences: Information Technology, Culture and Human","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G3534989158","display_name":null,"funder_award_id":"NSC 97-2221-E415-013-NSC 98-2221-E-415-013-","funder_id":"https://openalex.org/F4320321040","funder_display_name":"National Science Council"}],"funders":[{"id":"https://openalex.org/F4320321040","display_name":"National Science Council","ror":"https://ror.org/02kv4zf79"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":25,"referenced_works":["https://openalex.org/W187790134","https://openalex.org/W333120556","https://openalex.org/W1483099488","https://openalex.org/W1576818901","https://openalex.org/W1804754191","https://openalex.org/W2020841906","https://openalex.org/W2033855745","https://openalex.org/W2045501270","https://openalex.org/W2098416804","https://openalex.org/W2100972559","https://openalex.org/W2107005096","https://openalex.org/W2114027069","https://openalex.org/W2115884121","https://openalex.org/W2130479394","https://openalex.org/W2135346267","https://openalex.org/W2142337435","https://openalex.org/W2148219066","https://openalex.org/W2157346087","https://openalex.org/W2157908882","https://openalex.org/W2162352711","https://openalex.org/W2189168362","https://openalex.org/W4236268324","https://openalex.org/W4247676632","https://openalex.org/W4248664483","https://openalex.org/W4385126812"],"related_works":["https://openalex.org/W2094822546","https://openalex.org/W4388708026","https://openalex.org/W4255644844","https://openalex.org/W1969080446","https://openalex.org/W3108941781","https://openalex.org/W2181394498","https://openalex.org/W2287132924","https://openalex.org/W2131407941","https://openalex.org/W2125650596","https://openalex.org/W2586268529"],"abstract_inverted_index":{"Study":[0],"on":[1,74],"protein-protein":[2,71],"interaction":[3],"is":[4],"important":[5,38],"for":[6,30,70],"understanding":[7],"the":[8,25,35],"protein":[9,28,31,75],"function":[10],"in":[11,40,54,58],"cell":[12],"activity.":[13],"Protein-protein":[14],"recognition":[15,32,72,82],"plays":[16],"a":[17,65],"crucial":[18],"role":[19],"of":[20,27,47,89],"biology.":[21,59],"Therefore,":[22],"we":[23,63],"use":[24],"properties":[26],"interface":[29,36],"prediction":[33,66],"because":[34],"offers":[37],"clues":[39],"biological":[41],"functions.":[42],"Genetic":[43],"Programming":[44],"(GP),":[45],"one":[46],"artificial":[48],"intelligence":[49],"technologies,":[50],"has":[51],"been":[52],"proposed":[53],"data":[55],"classification":[56],"research":[57],"In":[60],"this":[61],"paper,":[62],"present":[64],"method":[67],"with":[68,84,91],"GP":[69],"based":[73],"binding":[76],"site":[77],"features.":[78],"We":[79],"successfully":[80],"predict":[81],"proteins":[83],"an":[85],"average":[86],"accuracy":[87],"rate":[88],"78%":[90],"ten-fold":[92],"cross":[93],"validation.":[94]},"counts_by_year":[],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-10-10T00:00:00"}
