{"id":"https://openalex.org/W1973432184","doi":"https://doi.org/10.1145/1597735.1597768","title":"Biomedical knowledge engineering tools based on experimental design","display_name":"Biomedical knowledge engineering tools based on experimental design","publication_year":2009,"publication_date":"2009-09-01","ids":{"openalex":"https://openalex.org/W1973432184","doi":"https://doi.org/10.1145/1597735.1597768","mag":"1973432184"},"language":"en","primary_location":{"id":"doi:10.1145/1597735.1597768","is_oa":false,"landing_page_url":"https://doi.org/10.1145/1597735.1597768","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the fifth international conference on Knowledge capture","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5087346345","display_name":"Gully Burns","orcid":"https://orcid.org/0000-0003-1493-865X"},"institutions":[{"id":"https://openalex.org/I1174212","display_name":"University of Southern California","ror":"https://ror.org/03taz7m60","country_code":"US","type":"education","lineage":["https://openalex.org/I1174212"]},{"id":"https://openalex.org/I2801204180","display_name":"Marina Del Rey Hospital","ror":"https://ror.org/05wqyfz02","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I2801204180"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Gully APC Burns","raw_affiliation_strings":["University of Southern California, Marina del Rey, CA, USA","University of Southern California, Marina Del Rey , CA, USA#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Southern California, Marina del Rey, CA, USA","institution_ids":["https://openalex.org/I1174212","https://openalex.org/I2801204180"]},{"raw_affiliation_string":"University of Southern California, Marina Del Rey , CA, USA#TAB#","institution_ids":["https://openalex.org/I1174212"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5103380057","display_name":"Thomas A. Russ","orcid":null},"institutions":[{"id":"https://openalex.org/I1174212","display_name":"University of Southern California","ror":"https://ror.org/03taz7m60","country_code":"US","type":"education","lineage":["https://openalex.org/I1174212"]},{"id":"https://openalex.org/I2801204180","display_name":"Marina Del Rey Hospital","ror":"https://ror.org/05wqyfz02","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I2801204180"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Thomas A. Russ","raw_affiliation_strings":["University of Southern California, Marina del Rey, CA, USA","University of Southern California, Marina Del Rey , CA, USA#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Southern California, Marina del Rey, CA, USA","institution_ids":["https://openalex.org/I1174212","https://openalex.org/I2801204180"]},{"raw_affiliation_string":"University of Southern California, Marina Del Rey , CA, USA#TAB#","institution_ids":["https://openalex.org/I1174212"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"173","last_page":"174"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9955999851226807,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9955999851226807,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9940000176429749,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.779137909412384},{"id":"https://openalex.org/keywords/inference","display_name":"Inference","score":0.6408489942550659},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.550480842590332},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.4973147213459015},{"id":"https://openalex.org/keywords/engineering-design-process","display_name":"Engineering design process","score":0.4121802747249603},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.40995556116104126},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.359883576631546},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.33726686239242554},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.3318091034889221},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.17259061336517334},{"id":"https://openalex.org/keywords/systems-engineering","display_name":"Systems engineering","score":0.12278696894645691},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.09829917550086975}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.779137909412384},{"id":"https://openalex.org/C2776214188","wikidata":"https://www.wikidata.org/wiki/Q408386","display_name":"Inference","level":2,"score":0.6408489942550659},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.550480842590332},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.4973147213459015},{"id":"https://openalex.org/C34972735","wikidata":"https://www.wikidata.org/wiki/Q2920267","display_name":"Engineering design process","level":2,"score":0.4121802747249603},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.40995556116104126},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.359883576631546},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.33726686239242554},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.3318091034889221},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.17259061336517334},{"id":"https://openalex.org/C201995342","wikidata":"https://www.wikidata.org/wiki/Q682496","display_name":"Systems engineering","level":1,"score":0.12278696894645691},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.09829917550086975},{"id":"https://openalex.org/C78519656","wikidata":"https://www.wikidata.org/wiki/Q101333","display_name":"Mechanical engineering","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/1597735.1597768","is_oa":false,"landing_page_url":"https://doi.org/10.1145/1597735.1597768","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the fifth international conference on Knowledge capture","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Quality Education","score":0.4099999964237213,"id":"https://metadata.un.org/sdg/4"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":7,"referenced_works":["https://openalex.org/W852874","https://openalex.org/W1550232114","https://openalex.org/W1975942563","https://openalex.org/W2318382044","https://openalex.org/W6600033781","https://openalex.org/W6632985190","https://openalex.org/W6644185396"],"related_works":["https://openalex.org/W2055243143","https://openalex.org/W4321636575","https://openalex.org/W1986418932","https://openalex.org/W2357796999","https://openalex.org/W2045526782","https://openalex.org/W2741131631","https://openalex.org/W2156919374","https://openalex.org/W1984019423","https://openalex.org/W4280588203","https://openalex.org/W1483472507"],"abstract_inverted_index":{"Curating":[0],"information":[1,108,117],"from":[2,53,124],"the":[3,36,70,80,99,103],"literature":[4],"for":[5,47,132],"storage":[6],"in":[7,13,73,102],"databases":[8],"is":[9],"a":[10,20,31,39,44,64,88,129,137],"crucial":[11],"task":[12],"biological":[14],"research,":[15],"and":[16,42,66,82,122,136],"many":[17],"groups":[18],"assign":[19],"particular":[21],"person":[22],"or":[23],"team":[24],"to":[25,34,62,95,98],"that":[26,48,85,142],"process.":[27],"We":[28,91,127],"are":[29],"developing":[30],"general-purpose":[32],"approach":[33],"representing":[35],"design":[37],"of":[38,113],"biomedical":[40],"experiment":[41],"provide":[43],"manageable":[45],"template":[46],"experiment's":[49],"data:":[50],"\"Knowledge":[51],"Engineering":[52],"Experimental":[54],"Design\"":[55],"(KEfED).":[56],"The":[57],"KEfED":[58,134],"model":[59],"allows":[60],"us":[61],"impose":[63],"formal":[65],"well-grounded":[67],"structure":[68,94],"on":[69,77],"data":[71,100],"contained":[72,101],"scientific":[74,89],"articles,":[75],"based":[76],"relationships":[78],"between":[79],"dependent":[81],"independent":[83],"variables":[84],"make":[86],"up":[87],"experiment.":[90],"use":[92,128],"this":[93],"add":[96],"value":[97],"articles":[104],"by":[105],"performing":[106],"directed":[107],"retrieval,":[109],"adding":[110],"basic":[111],"forms":[112],"reasoning":[114,140],"using":[115],"additional":[116],"such":[118,146],"as":[119],"anatomical":[120],"atlases":[121],"taxonomies":[123],"external":[125],"ontologies.":[126],"graphical":[130],"interface":[131],"constructing":[133],"models":[135],"first-order":[138],"logic":[139],"system":[141],"performs":[143],"inference":[144],"over":[145],"models.":[147]},"counts_by_year":[],"updated_date":"2026-07-22T07:51:19.307946","created_date":"2025-10-10T00:00:00"}
