{"id":"https://openalex.org/W2045305577","doi":"https://doi.org/10.1145/1414694.1414716","title":"A task-based information retrieval interface to support bioinformatics analysis","display_name":"A task-based information retrieval interface to support bioinformatics analysis","publication_year":2008,"publication_date":"2008-10-14","ids":{"openalex":"https://openalex.org/W2045305577","doi":"https://doi.org/10.1145/1414694.1414716","mag":"2045305577"},"language":"en","primary_location":{"id":"doi:10.1145/1414694.1414716","is_oa":false,"landing_page_url":"https://doi.org/10.1145/1414694.1414716","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the second international symposium on Information interaction in context","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5018449261","display_name":"Joan C. Bartlett","orcid":null},"institutions":[{"id":"https://openalex.org/I5023651","display_name":"McGill University","ror":"https://ror.org/01pxwe438","country_code":"CA","type":"education","lineage":["https://openalex.org/I5023651"]}],"countries":["CA"],"is_corresponding":true,"raw_author_name":"Joan C. Bartlett","raw_affiliation_strings":["McGill University, Montreal, QC, Canada","McGill University, Montreal, QC, Canada.;"],"affiliations":[{"raw_affiliation_string":"McGill University, Montreal, QC, Canada","institution_ids":["https://openalex.org/I5023651"]},{"raw_affiliation_string":"McGill University, Montreal, QC, Canada.;","institution_ids":["https://openalex.org/I5023651"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5051928866","display_name":"Tomasz Neugebauer","orcid":"https://orcid.org/0000-0002-9743-5910"},"institutions":[{"id":"https://openalex.org/I60158472","display_name":"Concordia University","ror":"https://ror.org/0420zvk78","country_code":"CA","type":"education","lineage":["https://openalex.org/I60158472"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Tomasz Neugebauer","raw_affiliation_strings":["Concordia University Libraries, Montreal, QC, Canada"],"affiliations":[{"raw_affiliation_string":"Concordia University Libraries, Montreal, QC, Canada","institution_ids":["https://openalex.org/I60158472"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5018449261"],"corresponding_institution_ids":["https://openalex.org/I5023651"],"apc_list":null,"apc_paid":null,"fwci":4.1382,"has_fulltext":false,"cited_by_count":9,"citation_normalized_percentile":{"value":0.939305,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"97","last_page":"101"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9778000116348267,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9778000116348267,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T12016","display_name":"Web Data Mining and Analysis","score":0.9495000243186951,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9351000189781189,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/interface","display_name":"Interface (matter)","score":0.7579060196876526},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7538232803344727},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.7233647704124451},{"id":"https://openalex.org/keywords/user-interface","display_name":"User interface","score":0.513097882270813},{"id":"https://openalex.org/keywords/task-analysis","display_name":"Task analysis","score":0.46840402483940125},{"id":"https://openalex.org/keywords/protocol","display_name":"Protocol (science)","score":0.44717666506767273},{"id":"https://openalex.org/keywords/human\u2013computer-interaction","display_name":"Human\u2013computer interaction","score":0.43530339002609253},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.3873157203197479},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3620480000972748},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.33590781688690186},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3258429169654846},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.10295331478118896},{"id":"https://openalex.org/keywords/systems-engineering","display_name":"Systems engineering","score":0.09403157234191895},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.07723233103752136},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.07618245482444763}],"concepts":[{"id":"https://openalex.org/C113843644","wikidata":"https://www.wikidata.org/wiki/Q901882","display_name":"Interface (matter)","level":4,"score":0.7579060196876526},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7538232803344727},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.7233647704124451},{"id":"https://openalex.org/C89505385","wikidata":"https://www.wikidata.org/wiki/Q47146","display_name":"User interface","level":2,"score":0.513097882270813},{"id":"https://openalex.org/C175154964","wikidata":"https://www.wikidata.org/wiki/Q380077","display_name":"Task analysis","level":3,"score":0.46840402483940125},{"id":"https://openalex.org/C2780385302","wikidata":"https://www.wikidata.org/wiki/Q367158","display_name":"Protocol (science)","level":3,"score":0.44717666506767273},{"id":"https://openalex.org/C107457646","wikidata":"https://www.wikidata.org/wiki/Q207434","display_name":"Human\u2013computer interaction","level":1,"score":0.43530339002609253},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3873157203197479},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3620480000972748},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.33590781688690186},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3258429169654846},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.10295331478118896},{"id":"https://openalex.org/C201995342","wikidata":"https://www.wikidata.org/wiki/Q682496","display_name":"Systems engineering","level":1,"score":0.09403157234191895},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.07723233103752136},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.07618245482444763},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C129307140","wikidata":"https://www.wikidata.org/wiki/Q6795880","display_name":"Maximum bubble pressure method","level":3,"score":0.0},{"id":"https://openalex.org/C204787440","wikidata":"https://www.wikidata.org/wiki/Q188504","display_name":"Alternative medicine","level":2,"score":0.0},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0},{"id":"https://openalex.org/C157915830","wikidata":"https://www.wikidata.org/wiki/Q2928001","display_name":"Bubble","level":2,"score":0.0},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/1414694.1414716","is_oa":false,"landing_page_url":"https://doi.org/10.1145/1414694.1414716","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the second international symposium on Information interaction in context","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":20,"referenced_works":["https://openalex.org/W54440756","https://openalex.org/W70778331","https://openalex.org/W108486503","https://openalex.org/W353011834","https://openalex.org/W2014405704","https://openalex.org/W2041932432","https://openalex.org/W2045828803","https://openalex.org/W2052658973","https://openalex.org/W2079896767","https://openalex.org/W2092610223","https://openalex.org/W2097489252","https://openalex.org/W2099473180","https://openalex.org/W2100807310","https://openalex.org/W2103487267","https://openalex.org/W2161850605","https://openalex.org/W2400441912","https://openalex.org/W2612074258","https://openalex.org/W2918103525","https://openalex.org/W4235109850","https://openalex.org/W4386618685"],"related_works":["https://openalex.org/W2378005410","https://openalex.org/W2170435352","https://openalex.org/W2048876619","https://openalex.org/W1570606890","https://openalex.org/W145847954","https://openalex.org/W2443844466","https://openalex.org/W365436934","https://openalex.org/W1649706580","https://openalex.org/W3195608031","https://openalex.org/W197655669"],"abstract_inverted_index":{"In":[0],"this":[1],"research-in-progress":[2],"paper,":[3],"we":[4],"present":[5],"the":[6,17,35,55,70,84,88,94,98,109,112],"design":[7],"and":[8,80,90,120],"pilot":[9,102],"testing":[10,103],"of":[11,19,38,60,108,111],"an":[12],"interface":[13,27,53],"created":[14],"to":[15,68,78,82],"support":[16,91],"integration":[18],"bioinformatics":[20,31],"analysis":[21,32,37],"with":[22],"biological":[23],"laboratory":[24],"research.":[25],"The":[26,52],"presents":[28],"a":[29,39,42,58],"task-based":[30],"protocol":[33],"detailing":[34],"functional":[36],"gene":[40],"sequence,":[41],"complex":[43],"information":[44,99],"task":[45],"that":[46],"is":[47,74],"problematic":[48],"for":[49,118],"many":[50],"biologists.":[51],"guides":[54],"user":[56,95],"through":[57],"series":[59],"14":[61],"analytical":[62],"steps,":[63],"providing":[64],"details":[65],"on":[66],"why":[67],"follow":[69],"step,":[71],"what":[72,76],"data":[73],"input/output,":[75],"tool(s)":[77],"use":[79],"how":[81],"interpret":[83],"results.":[85],"It":[86],"provides":[87],"framework":[89],"within":[92],"which":[93],"can":[96],"accomplish":[97],"task.":[100],"Our":[101],"has":[104],"demonstrated":[105],"initial":[106],"evidence":[107],"effectiveness":[110],"interface,":[113],"but":[114],"also":[115],"highlighted":[116],"areas":[117],"clarification":[119],"enhancement.":[121]},"counts_by_year":[{"year":2019,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2014,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}