{"id":"https://openalex.org/W1980793057","doi":"https://doi.org/10.1145/1294685.1294704","title":"Visualization of tunnels in protein molecules","display_name":"Visualization of tunnels in protein molecules","publication_year":2007,"publication_date":"2007-10-29","ids":{"openalex":"https://openalex.org/W1980793057","doi":"https://doi.org/10.1145/1294685.1294704","mag":"1980793057"},"language":"en","primary_location":{"id":"doi:10.1145/1294685.1294704","is_oa":false,"landing_page_url":"https://doi.org/10.1145/1294685.1294704","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 5th international conference on Computer graphics, virtual reality, visualisation and interaction in Africa","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5022022242","display_name":"Barbora Kozl\u00edkov\u00e1","orcid":"https://orcid.org/0000-0003-0045-0872"},"institutions":[{"id":"https://openalex.org/I21449261","display_name":"Masaryk University","ror":"https://ror.org/02j46qs45","country_code":"CZ","type":"education","lineage":["https://openalex.org/I21449261"]}],"countries":["CZ"],"is_corresponding":true,"raw_author_name":"Barbora Kozl\u00edkov\u00e1","raw_affiliation_strings":["Masaryk University, Brno, Czech Republic","(Masaryk University, Brno, Czech Republic)"],"affiliations":[{"raw_affiliation_string":"Masaryk University, Brno, Czech Republic","institution_ids":["https://openalex.org/I21449261"]},{"raw_affiliation_string":"(Masaryk University, Brno, Czech Republic)","institution_ids":["https://openalex.org/I21449261"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033343366","display_name":"Filip Andres","orcid":null},"institutions":[{"id":"https://openalex.org/I21449261","display_name":"Masaryk University","ror":"https://ror.org/02j46qs45","country_code":"CZ","type":"education","lineage":["https://openalex.org/I21449261"]}],"countries":["CZ"],"is_corresponding":false,"raw_author_name":"Filip Andres","raw_affiliation_strings":["Masaryk University, Brno, Czech Republic","(Masaryk University, Brno, Czech Republic)"],"affiliations":[{"raw_affiliation_string":"Masaryk University, Brno, Czech Republic","institution_ids":["https://openalex.org/I21449261"]},{"raw_affiliation_string":"(Masaryk University, Brno, Czech Republic)","institution_ids":["https://openalex.org/I21449261"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5003565623","display_name":"Ji\u0159\u00ed\u00ad Sochor","orcid":"https://orcid.org/0000-0001-7823-1544"},"institutions":[{"id":"https://openalex.org/I21449261","display_name":"Masaryk University","ror":"https://ror.org/02j46qs45","country_code":"CZ","type":"education","lineage":["https://openalex.org/I21449261"]}],"countries":["CZ"],"is_corresponding":false,"raw_author_name":"Ji\u0159\u00ed Sochor","raw_affiliation_strings":["Masaryk University, Brno, Czech Republic","(Masaryk University, Brno, Czech Republic)"],"affiliations":[{"raw_affiliation_string":"Masaryk University, Brno, Czech Republic","institution_ids":["https://openalex.org/I21449261"]},{"raw_affiliation_string":"(Masaryk University, Brno, Czech Republic)","institution_ids":["https://openalex.org/I21449261"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5022022242"],"corresponding_institution_ids":["https://openalex.org/I21449261"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.06835272,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"111","last_page":"118"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.9878000020980835,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9837999939918518,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.9083698987960815},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6171481013298035},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.5279152393341064},{"id":"https://openalex.org/keywords/data-visualization","display_name":"Data visualization","score":0.5099941492080688},{"id":"https://openalex.org/keywords/field","display_name":"Field (mathematics)","score":0.4662080705165863},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.20157122611999512}],"concepts":[{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.9083698987960815},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6171481013298035},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.5279152393341064},{"id":"https://openalex.org/C172367668","wikidata":"https://www.wikidata.org/wiki/Q6504956","display_name":"Data visualization","level":3,"score":0.5099941492080688},{"id":"https://openalex.org/C9652623","wikidata":"https://www.wikidata.org/wiki/Q190109","display_name":"Field (mathematics)","level":2,"score":0.4662080705165863},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.20157122611999512},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/1294685.1294704","is_oa":false,"landing_page_url":"https://doi.org/10.1145/1294685.1294704","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 5th international conference on Computer graphics, virtual reality, visualisation and interaction in Africa","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":13,"referenced_works":["https://openalex.org/W75552375","https://openalex.org/W126840538","https://openalex.org/W1594374315","https://openalex.org/W1995111815","https://openalex.org/W2029667189","https://openalex.org/W2053448121","https://openalex.org/W2078290150","https://openalex.org/W2131080603","https://openalex.org/W2153504150","https://openalex.org/W2229412420","https://openalex.org/W2234920829","https://openalex.org/W4233857083","https://openalex.org/W4293003482"],"related_works":["https://openalex.org/W2013728941","https://openalex.org/W4225274103","https://openalex.org/W2579659702","https://openalex.org/W2154046714","https://openalex.org/W1965329638","https://openalex.org/W2189613078","https://openalex.org/W2923661510","https://openalex.org/W1574055964","https://openalex.org/W2542318691","https://openalex.org/W3160708108"],"abstract_inverted_index":{"This":[0],"paper":[1],"presents":[2],"two":[3],"novel":[4],"techniques":[5],"for":[6],"visualization":[7],"of":[8,13,20,27,35,46,51,73,85],"tunnels":[9],"in":[10,17,43,82],"complex":[11],"molecules":[12],"proteins.":[14],"Long-term":[15],"research":[16],"the":[18,25,28,33,44,55,61,66,70,74,83],"field":[19],"protein":[21,29],"analysis":[22,62],"proved":[23],"that":[24],"reactivity":[26],"molecule":[30],"depends":[31],"on":[32],"presence":[34],"tunnels.":[36],"These":[37],"structures":[38],"are":[39],"very":[40,57],"important":[41,58],"mainly":[42],"process":[45,84],"finding":[47],"new":[48,87],"pharmaceuticals.":[49],"Visualization":[50],"a":[52,79],"tunnel":[53],"is":[54],"next":[56],"step":[59],"after":[60],"because":[63],"it":[64],"enables":[65],"biochemists":[67],"to":[68],"determine":[69],"crucial":[71],"regions":[72],"tunnel,":[75],"which":[76],"can":[77],"have":[78],"substantial":[80],"effect":[81],"designing":[86],"medication.":[88]},"counts_by_year":[{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
