{"id":"https://openalex.org/W2013925174","doi":"https://doi.org/10.1145/1187335.1187340","title":"Web based molecular visualization using procedural shaders in X3D","display_name":"Web based molecular visualization using procedural shaders in X3D","publication_year":2005,"publication_date":"2005-01-01","ids":{"openalex":"https://openalex.org/W2013925174","doi":"https://doi.org/10.1145/1187335.1187340","mag":"2013925174"},"language":"en","primary_location":{"id":"doi:10.1145/1187335.1187340","is_oa":false,"landing_page_url":"https://doi.org/10.1145/1187335.1187340","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"ACM SIGGRAPH 2005 Web program on   - SIGGRAPH '05","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100415353","display_name":"Feng Liu","orcid":"https://orcid.org/0000-0003-4720-0571"},"institutions":[{"id":"https://openalex.org/I181565077","display_name":"Georgia State University","ror":"https://ror.org/03qt6ba18","country_code":"US","type":"education","lineage":["https://openalex.org/I181565077"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Feng Liu","raw_affiliation_strings":["Georgia State University","Georgia State University,"],"affiliations":[{"raw_affiliation_string":"Georgia State University","institution_ids":["https://openalex.org/I181565077"]},{"raw_affiliation_string":"Georgia State University,","institution_ids":["https://openalex.org/I181565077"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016449701","display_name":"Scott Owen","orcid":null},"institutions":[{"id":"https://openalex.org/I181565077","display_name":"Georgia State University","ror":"https://ror.org/03qt6ba18","country_code":"US","type":"education","lineage":["https://openalex.org/I181565077"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Scott Owen","raw_affiliation_strings":["Georgia State University","Georgia State University,"],"affiliations":[{"raw_affiliation_string":"Georgia State University","institution_ids":["https://openalex.org/I181565077"]},{"raw_affiliation_string":"Georgia State University,","institution_ids":["https://openalex.org/I181565077"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083968726","display_name":"Ying Zhu","orcid":"https://orcid.org/0000-0002-9155-2315"},"institutions":[{"id":"https://openalex.org/I181565077","display_name":"Georgia State University","ror":"https://ror.org/03qt6ba18","country_code":"US","type":"education","lineage":["https://openalex.org/I181565077"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ying Zhu","raw_affiliation_strings":["Georgia State University","Georgia State University,"],"affiliations":[{"raw_affiliation_string":"Georgia State University","institution_ids":["https://openalex.org/I181565077"]},{"raw_affiliation_string":"Georgia State University,","institution_ids":["https://openalex.org/I181565077"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007378854","display_name":"Robert W. Harrison","orcid":"https://orcid.org/0000-0003-2449-1214"},"institutions":[{"id":"https://openalex.org/I181565077","display_name":"Georgia State University","ror":"https://ror.org/03qt6ba18","country_code":"US","type":"education","lineage":["https://openalex.org/I181565077"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Robert Harrison","raw_affiliation_strings":["Georgia State University","Georgia State University,"],"affiliations":[{"raw_affiliation_string":"Georgia State University","institution_ids":["https://openalex.org/I181565077"]},{"raw_affiliation_string":"Georgia State University,","institution_ids":["https://openalex.org/I181565077"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5077368913","display_name":"Irene T. Weber","orcid":"https://orcid.org/0000-0003-4876-7393"},"institutions":[{"id":"https://openalex.org/I181565077","display_name":"Georgia State University","ror":"https://ror.org/03qt6ba18","country_code":"US","type":"education","lineage":["https://openalex.org/I181565077"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Irene Weber","raw_affiliation_strings":["Georgia State University","Georgia State University,"],"affiliations":[{"raw_affiliation_string":"Georgia State University","institution_ids":["https://openalex.org/I181565077"]},{"raw_affiliation_string":"Georgia State University,","institution_ids":["https://openalex.org/I181565077"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5100415353"],"corresponding_institution_ids":["https://openalex.org/I181565077"],"apc_list":null,"apc_paid":null,"fwci":0.5191,"has_fulltext":false,"cited_by_count":4,"citation_normalized_percentile":{"value":0.7159173,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"4","last_page":"4"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10715","display_name":"Distributed and Parallel Computing Systems","score":0.9911999702453613,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10715","display_name":"Distributed and Parallel Computing Systems","score":0.9911999702453613,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9743000268936157,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T11181","display_name":"Advanced Data Storage Technologies","score":0.901199996471405,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/shader","display_name":"Shader","score":0.9698265194892883},{"id":"https://openalex.org/keywords/x3d","display_name":"X3D","score":0.9067162275314331},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8287887573242188},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.7361921072006226},{"id":"https://openalex.org/keywords/web-application","display_name":"Web application","score":0.5134885907173157},{"id":"https://openalex.org/keywords/opengl","display_name":"OpenGL","score":0.44287532567977905},{"id":"https://openalex.org/keywords/computer-graphics","display_name":"Computer graphics (images)","score":0.43372005224227905},{"id":"https://openalex.org/keywords/graphics","display_name":"Graphics","score":0.359133243560791},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.33243274688720703},{"id":"https://openalex.org/keywords/human\u2013computer-interaction","display_name":"Human\u2013computer interaction","score":0.32336485385894775},{"id":"https://openalex.org/keywords/vrml","display_name":"VRML","score":0.2294745147228241},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.1605367660522461},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.14511510729789734}],"concepts":[{"id":"https://openalex.org/C177681979","wikidata":"https://www.wikidata.org/wiki/Q633182","display_name":"Shader","level":3,"score":0.9698265194892883},{"id":"https://openalex.org/C49902421","wikidata":"https://www.wikidata.org/wiki/Q930428","display_name":"X3D","level":4,"score":0.9067162275314331},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8287887573242188},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.7361921072006226},{"id":"https://openalex.org/C118643609","wikidata":"https://www.wikidata.org/wiki/Q189210","display_name":"Web application","level":2,"score":0.5134885907173157},{"id":"https://openalex.org/C2778305236","wikidata":"https://www.wikidata.org/wiki/Q178570","display_name":"OpenGL","level":3,"score":0.44287532567977905},{"id":"https://openalex.org/C121684516","wikidata":"https://www.wikidata.org/wiki/Q7600677","display_name":"Computer graphics (images)","level":1,"score":0.43372005224227905},{"id":"https://openalex.org/C21442007","wikidata":"https://www.wikidata.org/wiki/Q1027879","display_name":"Graphics","level":2,"score":0.359133243560791},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.33243274688720703},{"id":"https://openalex.org/C107457646","wikidata":"https://www.wikidata.org/wiki/Q207434","display_name":"Human\u2013computer interaction","level":1,"score":0.32336485385894775},{"id":"https://openalex.org/C75625381","wikidata":"https://www.wikidata.org/wiki/Q176061","display_name":"VRML","level":3,"score":0.2294745147228241},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.1605367660522461},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.14511510729789734}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/1187335.1187340","is_oa":false,"landing_page_url":"https://doi.org/10.1145/1187335.1187340","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"ACM SIGGRAPH 2005 Web program on   - SIGGRAPH '05","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":21,"referenced_works":["https://openalex.org/W15771856","https://openalex.org/W1484341170","https://openalex.org/W1520730837","https://openalex.org/W1548638602","https://openalex.org/W1996230572","https://openalex.org/W2023770186","https://openalex.org/W2027791658","https://openalex.org/W2035522253","https://openalex.org/W2050744010","https://openalex.org/W2063846997","https://openalex.org/W2088636666","https://openalex.org/W2109909864","https://openalex.org/W2111238213","https://openalex.org/W2117236520","https://openalex.org/W2118688057","https://openalex.org/W2122585444","https://openalex.org/W2161446118","https://openalex.org/W2168756437","https://openalex.org/W2169706611","https://openalex.org/W2244686166","https://openalex.org/W2319537256"],"related_works":["https://openalex.org/W2035522253","https://openalex.org/W2624792315","https://openalex.org/W2132794636","https://openalex.org/W2563180316","https://openalex.org/W2993674217","https://openalex.org/W2013925174","https://openalex.org/W2186249873","https://openalex.org/W2917604478","https://openalex.org/W1998134881","https://openalex.org/W2409467719"],"abstract_inverted_index":{"The":[0,86],"introduction":[1],"of":[2,11,37,48,108],"programmable":[3],"Graphics":[4],"Processing":[5],"Units":[6],"(GPUs)":[7],"and":[8,42,82,103,111],"the":[9,15,35,46,75,93],"addition":[10],"procedural":[12,53,87],"shaders":[13,88],"to":[14,24,40,58,71,80,84,95,105],"web3D":[16],"standard":[17,76],"X3D":[18,96],"provide":[19],"us":[20],"with":[21,63],"new":[22],"techniques":[23,39],"develop":[25],"real-time":[26],"Web":[27],"based":[28],"visualization.":[29],"In":[30],"this":[31],"paper":[32],"we":[33,55],"discuss":[34],"applications":[36],"these":[38],"bioinformatics":[41,77],"chemistry":[43],"visualization,":[44],"specifically":[45],"visualization":[47],"large":[49],"biomolecules.":[50],"By":[51],"using":[52],"shaders,":[54],"are":[56,89],"able":[57],"produce":[59],"higher":[60,100],"quality":[61,101],"visualizations":[62],"minimal":[64],"performance":[65],"penalty.":[66],"We":[67],"have":[68],"developed":[69],"methods":[70],"automatically":[72,90],"convert":[73],"from":[74],"PDB":[78],"format":[79],"CML":[81,94],"then":[83],"X3D.":[85],"inserted":[91],"during":[92],"conversion.":[97],"This":[98],"provides":[99],"images":[102],"leads":[104],"future":[106],"possibilities":[107],"more":[109],"flexible":[110],"enhanced":[112],"visualizations.":[113]},"counts_by_year":[{"year":2014,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
