{"id":"https://openalex.org/W2080593377","doi":"https://doi.org/10.1145/1141277.1141317","title":"BioChain","display_name":"BioChain","publication_year":2006,"publication_date":"2006-04-23","ids":{"openalex":"https://openalex.org/W2080593377","doi":"https://doi.org/10.1145/1141277.1141317","mag":"2080593377"},"language":"en","primary_location":{"id":"doi:10.1145/1141277.1141317","is_oa":false,"landing_page_url":"https://doi.org/10.1145/1141277.1141317","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 2006 ACM symposium on Applied computing","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5054593976","display_name":"Lawrence H. Reeve","orcid":null},"institutions":[{"id":"https://openalex.org/I72816309","display_name":"Drexel University","ror":"https://ror.org/04bdffz58","country_code":"US","type":"education","lineage":["https://openalex.org/I72816309"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Lawrence Reeve","raw_affiliation_strings":["Drexel University, Philadelphia, PA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Drexel University, Philadelphia, PA","institution_ids":["https://openalex.org/I72816309"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101772919","display_name":"Hyoil Han","orcid":"https://orcid.org/0000-0001-8424-9804"},"institutions":[{"id":"https://openalex.org/I72816309","display_name":"Drexel University","ror":"https://ror.org/04bdffz58","country_code":"US","type":"education","lineage":["https://openalex.org/I72816309"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hyoil Han","raw_affiliation_strings":["Drexel University, Philadelphia, PA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Drexel University, Philadelphia, PA","institution_ids":["https://openalex.org/I72816309"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5047729558","display_name":"Ari D. Brooks","orcid":"https://orcid.org/0000-0003-4328-7307"},"institutions":[{"id":"https://openalex.org/I72816309","display_name":"Drexel University","ror":"https://ror.org/04bdffz58","country_code":"US","type":"education","lineage":["https://openalex.org/I72816309"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ari D. Brooks","raw_affiliation_strings":["Drexel University, Philadelphia, PA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Drexel University, Philadelphia, PA","institution_ids":["https://openalex.org/I72816309"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":2.7976,"has_fulltext":false,"cited_by_count":38,"citation_normalized_percentile":{"value":0.90911821,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":null,"issue":null,"first_page":"180","last_page":"184"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10181","display_name":"Natural Language Processing Techniques","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8666804432868958},{"id":"https://openalex.org/keywords/unified-medical-language-system","display_name":"Unified Medical Language System","score":0.8288317918777466},{"id":"https://openalex.org/keywords/automatic-summarization","display_name":"Automatic summarization","score":0.8148496150970459},{"id":"https://openalex.org/keywords/chaining","display_name":"Chaining","score":0.802178680896759},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.696491003036499},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.5481602549552917},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5116079449653625},{"id":"https://openalex.org/keywords/sentence","display_name":"Sentence","score":0.5085691213607788},{"id":"https://openalex.org/keywords/semantics","display_name":"Semantics (computer science)","score":0.4794546365737915},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.4680138826370239},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.46528783440589905},{"id":"https://openalex.org/keywords/lexicon","display_name":"Lexicon","score":0.43942782282829285},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.110667884349823}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8666804432868958},{"id":"https://openalex.org/C69505689","wikidata":"https://www.wikidata.org/wiki/Q455338","display_name":"Unified Medical Language System","level":2,"score":0.8288317918777466},{"id":"https://openalex.org/C170858558","wikidata":"https://www.wikidata.org/wiki/Q1394144","display_name":"Automatic summarization","level":2,"score":0.8148496150970459},{"id":"https://openalex.org/C49020025","wikidata":"https://www.wikidata.org/wiki/Q1059099","display_name":"Chaining","level":2,"score":0.802178680896759},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.696491003036499},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.5481602549552917},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5116079449653625},{"id":"https://openalex.org/C2777530160","wikidata":"https://www.wikidata.org/wiki/Q41796","display_name":"Sentence","level":2,"score":0.5085691213607788},{"id":"https://openalex.org/C184337299","wikidata":"https://www.wikidata.org/wiki/Q1437428","display_name":"Semantics (computer science)","level":2,"score":0.4794546365737915},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.4680138826370239},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.46528783440589905},{"id":"https://openalex.org/C2778121359","wikidata":"https://www.wikidata.org/wiki/Q8096","display_name":"Lexicon","level":2,"score":0.43942782282829285},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.110667884349823},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C542102704","wikidata":"https://www.wikidata.org/wiki/Q183257","display_name":"Psychotherapist","level":1,"score":0.0},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/1141277.1141317","is_oa":false,"landing_page_url":"https://doi.org/10.1145/1141277.1141317","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 2006 ACM symposium on Applied computing","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.6899999976158142,"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":16,"referenced_works":["https://openalex.org/W102264027","https://openalex.org/W1550258693","https://openalex.org/W1565570978","https://openalex.org/W1573514622","https://openalex.org/W1574211058","https://openalex.org/W1710422233","https://openalex.org/W1989335536","https://openalex.org/W2038721957","https://openalex.org/W2065841724","https://openalex.org/W2140887277","https://openalex.org/W2800716056","https://openalex.org/W2997961850","https://openalex.org/W3098800931","https://openalex.org/W3194099420","https://openalex.org/W4235505822","https://openalex.org/W6634065907"],"related_works":["https://openalex.org/W2366403280","https://openalex.org/W1495108544","https://openalex.org/W2091301346","https://openalex.org/W3148229873","https://openalex.org/W2150160875","https://openalex.org/W4242223894","https://openalex.org/W1979345825","https://openalex.org/W2748907937","https://openalex.org/W1577541759","https://openalex.org/W2161312614"],"abstract_inverted_index":{"Lexical":[0],"chaining":[1,14,52,59,64,103,109,192],"is":[2,54,91,99,144,193],"a":[3,44,106,137,182,194],"technique":[4],"for":[5,35,111,197],"identifying":[6],"semantically-related":[7,17,65,69],"terms":[8],"in":[9],"text.":[10,49,161],"We":[11,162],"propose":[12,101],"concept":[13,25,51,102,108,126,154,191],"to":[15,30,42,93,100,158,181],"link":[16],"concepts":[18,135],"within":[19],"biomedical":[20,48,113,198],"text":[21,199],"together.":[22],"The":[23,37,50,71,86,97,124,152],"resulting":[24,125,153],"chains":[26,127,155],"are":[27,40,81,131,156,179],"then":[28],"used":[29,41,82,92,157],"identify":[31],"candidate":[32],"sentences":[33,39],"useful":[34,180],"extraction.":[36],"extracted":[38],"produce":[43],"summary":[45,139],"of":[46,121,136],"the":[47,112,119,129,134,160,176,189],"process":[53],"adapted":[55],"from":[56,128],"existing":[57,168],"lexical":[58,122],"approaches,":[60],"which":[61],"focus":[62],"on":[63],"terms,":[66],"rather":[67],"than":[68],"concepts.":[70],"Unified":[72],"Medical":[73],"Language":[74],"System":[75],"(UMLS)":[76],"Metathesaurus":[77],"and":[78,104,118,148,174],"Semantic":[79],"Network":[80],"as":[83],"semantic":[84],"resources.":[85],"UMLS":[87,116],"MetaMap":[88],"Transfer":[89],"tool":[90],"perform":[94],"text-to-concept":[95],"mapping.":[96],"goal":[98],"develop":[105],"novel":[107],"system":[110],"domain":[114,183],"using":[115,167,171],"lexicon":[117],"ideas":[120],"chaining.":[123],"full-text":[130],"evaluated":[132],"against":[133],"human":[138],"(the":[140],"paper's":[141],"abstract).":[142],"Precision":[143],"measured":[145],"at":[146,150],"0.90":[147],"recall":[149],"0.92.":[151],"summarize":[159],"also":[163],"evaluate":[164],"generated":[165,177],"summaries":[166,178],"summarization":[169],"systems":[170],"sentence":[172],"matching,":[173],"confirm":[175],"expert.":[184],"Our":[185],"results":[186],"show":[187],"that":[188],"proposed":[190],"promising":[195],"methodology":[196],"summarization.":[200]},"counts_by_year":[{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":5},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":5},{"year":2017,"cited_by_count":3},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":3}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2016-06-24T00:00:00"}
