{"id":"https://openalex.org/W1967087586","doi":"https://doi.org/10.1145/1066677.1066728","title":"Text-based summarization and visualization of gene clusters","display_name":"Text-based summarization and visualization of gene clusters","publication_year":2005,"publication_date":"2005-03-13","ids":{"openalex":"https://openalex.org/W1967087586","doi":"https://doi.org/10.1145/1066677.1066728","mag":"1967087586"},"language":"en","primary_location":{"id":"doi:10.1145/1066677.1066728","is_oa":false,"landing_page_url":"https://doi.org/10.1145/1066677.1066728","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 2005 ACM symposium on Applied computing","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5069954994","display_name":"Pankaj Kankar","orcid":null},"institutions":[{"id":"https://openalex.org/I4210103279","display_name":"IBM Research - India","ror":"https://ror.org/014wt7r80","country_code":"IN","type":"facility","lineage":["https://openalex.org/I1341412227","https://openalex.org/I4210103279","https://openalex.org/I4210114115"]},{"id":"https://openalex.org/I1341412227","display_name":"IBM (United States)","ror":"https://ror.org/05hh8d621","country_code":"US","type":"company","lineage":["https://openalex.org/I1341412227"]},{"id":"https://openalex.org/I68891433","display_name":"Indian Institute of Technology Delhi","ror":"https://ror.org/049tgcd06","country_code":"IN","type":"education","lineage":["https://openalex.org/I68891433"]}],"countries":["IN","US"],"is_corresponding":true,"raw_author_name":"Pankaj Kankar","raw_affiliation_strings":["IBM India Research Lab IIT, Delhi, India","IBM India Research Lab IIT, Delhi, India#TAB#"],"affiliations":[{"raw_affiliation_string":"IBM India Research Lab IIT, Delhi, India","institution_ids":["https://openalex.org/I4210103279","https://openalex.org/I68891433"]},{"raw_affiliation_string":"IBM India Research Lab IIT, Delhi, India#TAB#","institution_ids":["https://openalex.org/I1341412227"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5047802785","display_name":"Sougata Mukherjea","orcid":null},"institutions":[{"id":"https://openalex.org/I1341412227","display_name":"IBM (United States)","ror":"https://ror.org/05hh8d621","country_code":"US","type":"company","lineage":["https://openalex.org/I1341412227"]},{"id":"https://openalex.org/I4210103279","display_name":"IBM Research - India","ror":"https://ror.org/014wt7r80","country_code":"IN","type":"facility","lineage":["https://openalex.org/I1341412227","https://openalex.org/I4210103279","https://openalex.org/I4210114115"]},{"id":"https://openalex.org/I68891433","display_name":"Indian Institute of Technology Delhi","ror":"https://ror.org/049tgcd06","country_code":"IN","type":"education","lineage":["https://openalex.org/I68891433"]}],"countries":["IN","US"],"is_corresponding":false,"raw_author_name":"Sougata Mukherjea","raw_affiliation_strings":["IBM India Research Lab IIT, Delhi, India","IBM India Research Lab IIT, Delhi, India#TAB#"],"affiliations":[{"raw_affiliation_string":"IBM India Research Lab IIT, Delhi, India","institution_ids":["https://openalex.org/I4210103279","https://openalex.org/I68891433"]},{"raw_affiliation_string":"IBM India Research Lab IIT, Delhi, India#TAB#","institution_ids":["https://openalex.org/I1341412227"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5069954994"],"corresponding_institution_ids":["https://openalex.org/I1341412227","https://openalex.org/I4210103279","https://openalex.org/I68891433"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.05522236,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"210","last_page":"211"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9929999709129333,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/automatic-summarization","display_name":"Automatic summarization","score":0.9202558398246765},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.7490085363388062},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7445845603942871},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.6319244503974915},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.5657247304916382},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.5124099850654602},{"id":"https://openalex.org/keywords/meaning","display_name":"Meaning (existential)","score":0.49881839752197266},{"id":"https://openalex.org/keywords/index","display_name":"Index (typography)","score":0.4491434693336487},{"id":"https://openalex.org/keywords/data-visualization","display_name":"Data visualization","score":0.4243735671043396},{"id":"https://openalex.org/keywords/graph-drawing","display_name":"Graph drawing","score":0.4201641380786896},{"id":"https://openalex.org/keywords/information-visualization","display_name":"Information visualization","score":0.4151776432991028},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3437424302101135},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.281566858291626},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.26470866799354553},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.20634090900421143},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.1048433780670166}],"concepts":[{"id":"https://openalex.org/C170858558","wikidata":"https://www.wikidata.org/wiki/Q1394144","display_name":"Automatic summarization","level":2,"score":0.9202558398246765},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.7490085363388062},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7445845603942871},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.6319244503974915},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.5657247304916382},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.5124099850654602},{"id":"https://openalex.org/C2780876879","wikidata":"https://www.wikidata.org/wiki/Q3054749","display_name":"Meaning (existential)","level":2,"score":0.49881839752197266},{"id":"https://openalex.org/C2777382242","wikidata":"https://www.wikidata.org/wiki/Q6017816","display_name":"Index (typography)","level":2,"score":0.4491434693336487},{"id":"https://openalex.org/C172367668","wikidata":"https://www.wikidata.org/wiki/Q6504956","display_name":"Data visualization","level":3,"score":0.4243735671043396},{"id":"https://openalex.org/C112953755","wikidata":"https://www.wikidata.org/wiki/Q739462","display_name":"Graph drawing","level":3,"score":0.4201641380786896},{"id":"https://openalex.org/C185578843","wikidata":"https://www.wikidata.org/wiki/Q10609775","display_name":"Information visualization","level":3,"score":0.4151776432991028},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3437424302101135},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.281566858291626},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.26470866799354553},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.20634090900421143},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.1048433780670166},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.0},{"id":"https://openalex.org/C542102704","wikidata":"https://www.wikidata.org/wiki/Q183257","display_name":"Psychotherapist","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/1066677.1066728","is_oa":false,"landing_page_url":"https://doi.org/10.1145/1066677.1066728","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 2005 ACM symposium on Applied computing","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education","score":0.7699999809265137}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":3,"referenced_works":["https://openalex.org/W1566012138","https://openalex.org/W2016085990","https://openalex.org/W2115159360"],"related_works":["https://openalex.org/W3010975807","https://openalex.org/W2027333138","https://openalex.org/W3185027765","https://openalex.org/W2096373083","https://openalex.org/W2105200106","https://openalex.org/W2151530263","https://openalex.org/W2104025928","https://openalex.org/W191365238","https://openalex.org/W1574055964","https://openalex.org/W2295030662"],"abstract_inverted_index":{"We":[0,80],"present":[1],"a":[2,16,26,56],"system":[3,62],"named":[4],"MedSummarizer":[5],"which":[6],"uses":[7],"biomedical":[8],"literature":[9],"information":[10],"to":[11,15],"assign":[12],"biological":[13,31],"meaning":[14],"cluster":[17],"of":[18,29,50,65,89],"genes.":[19],"Using":[20],"relevant":[21],"PubMed":[22],"citations,":[23],"it":[24,44],"creates":[25],"ranked":[27],"list":[28],"important":[30],"concepts":[32],"that":[33],"describes":[34],"the":[35,41,82],"gene":[36],"list.":[37],"Further,":[38],"based":[39,58],"on":[40],"assigned":[42],"concepts,":[43],"computes":[45],"similarity":[46],"between":[47],"each":[48],"pair":[49],"genes":[51],"and":[52],"displays":[53],"this":[54],"using":[55,85],"graph":[57],"visualization":[59],"technique.":[60],"The":[61],"allows":[63],"use":[64],"human":[66],"curated":[67],"index":[68],"(e.g.":[69],"Mesh":[70],"terms)":[71],"as":[72,74],"well":[73],"automatic":[75],"annotations":[76],"derived":[77],"from":[78],"free-text.":[79],"compare":[81],"results":[83],"obtained":[84],"these":[86],"two":[87],"types":[88],"terms.":[90]},"counts_by_year":[{"year":2013,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
