{"id":"https://openalex.org/W2103538877","doi":"https://doi.org/10.1145/1031570.1031583","title":"Integration of biological sources","display_name":"Integration of biological sources","publication_year":2004,"publication_date":"2004-09-01","ids":{"openalex":"https://openalex.org/W2103538877","doi":"https://doi.org/10.1145/1031570.1031583","mag":"2103538877"},"language":"en","primary_location":{"id":"doi:10.1145/1031570.1031583","is_oa":false,"landing_page_url":"https://doi.org/10.1145/1031570.1031583","pdf_url":null,"source":{"id":"https://openalex.org/S47508943","display_name":"ACM SIGMOD Record","issn_l":"0163-5808","issn":["0163-5808","1943-5835"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319798","host_organization_name":"Association for Computing Machinery","host_organization_lineage":["https://openalex.org/P4310319798"],"host_organization_lineage_names":["Association for Computing Machinery"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"ACM SIGMOD Record","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5103817714","display_name":"Thomas Hern\u00e1ndez","orcid":null},"institutions":[{"id":"https://openalex.org/I55732556","display_name":"Arizona State University","ror":"https://ror.org/03efmqc40","country_code":"US","type":"education","lineage":["https://openalex.org/I55732556"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Thomas Hernandez","raw_affiliation_strings":["Arizona State University, Tempe, AZ"],"affiliations":[{"raw_affiliation_string":"Arizona State University, Tempe, AZ","institution_ids":["https://openalex.org/I55732556"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5023323170","display_name":"Subbarao Kambhampati","orcid":"https://orcid.org/0000-0002-9069-0265"},"institutions":[{"id":"https://openalex.org/I55732556","display_name":"Arizona State University","ror":"https://ror.org/03efmqc40","country_code":"US","type":"education","lineage":["https://openalex.org/I55732556"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Subbarao Kambhampati","raw_affiliation_strings":["Arizona State University, Tempe, AZ"],"affiliations":[{"raw_affiliation_string":"Arizona State University, Tempe, AZ","institution_ids":["https://openalex.org/I55732556"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5103817714"],"corresponding_institution_ids":["https://openalex.org/I55732556"],"apc_list":null,"apc_paid":null,"fwci":6.1981,"has_fulltext":false,"cited_by_count":153,"citation_normalized_percentile":{"value":0.97479869,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"33","issue":"3","first_page":"51","last_page":"60"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9904999732971191,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7649651765823364},{"id":"https://openalex.org/keywords/data-integration","display_name":"Data integration","score":0.7497704029083252},{"id":"https://openalex.org/keywords/system-integration","display_name":"System integration","score":0.6789636015892029},{"id":"https://openalex.org/keywords/variety","display_name":"Variety (cybernetics)","score":0.6683864593505859},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.5932544469833374},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.5703044533729553},{"id":"https://openalex.org/keywords/focus","display_name":"Focus (optics)","score":0.4920024573802948},{"id":"https://openalex.org/keywords/field","display_name":"Field (mathematics)","score":0.42649561166763306},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.21535947918891907},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.09344446659088135}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7649651765823364},{"id":"https://openalex.org/C72634772","wikidata":"https://www.wikidata.org/wiki/Q386824","display_name":"Data integration","level":2,"score":0.7497704029083252},{"id":"https://openalex.org/C19527686","wikidata":"https://www.wikidata.org/wiki/Q1665453","display_name":"System integration","level":2,"score":0.6789636015892029},{"id":"https://openalex.org/C136197465","wikidata":"https://www.wikidata.org/wiki/Q1729295","display_name":"Variety (cybernetics)","level":2,"score":0.6683864593505859},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.5932544469833374},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.5703044533729553},{"id":"https://openalex.org/C192209626","wikidata":"https://www.wikidata.org/wiki/Q190909","display_name":"Focus (optics)","level":2,"score":0.4920024573802948},{"id":"https://openalex.org/C9652623","wikidata":"https://www.wikidata.org/wiki/Q190109","display_name":"Field (mathematics)","level":2,"score":0.42649561166763306},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.21535947918891907},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.09344446659088135},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C120665830","wikidata":"https://www.wikidata.org/wiki/Q14620","display_name":"Optics","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/1031570.1031583","is_oa":false,"landing_page_url":"https://doi.org/10.1145/1031570.1031583","pdf_url":null,"source":{"id":"https://openalex.org/S47508943","display_name":"ACM SIGMOD Record","issn_l":"0163-5808","issn":["0163-5808","1943-5835"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319798","host_organization_name":"Association for Computing Machinery","host_organization_lineage":["https://openalex.org/P4310319798"],"host_organization_lineage_names":["Association for Computing Machinery"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"ACM SIGMOD Record","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":41,"referenced_works":["https://openalex.org/W42213036","https://openalex.org/W120802049","https://openalex.org/W1502040550","https://openalex.org/W1503478350","https://openalex.org/W1508790985","https://openalex.org/W1536398564","https://openalex.org/W1544245168","https://openalex.org/W1582370027","https://openalex.org/W1603224403","https://openalex.org/W1960069969","https://openalex.org/W1968766436","https://openalex.org/W1973415432","https://openalex.org/W1983594585","https://openalex.org/W1992673035","https://openalex.org/W2014930052","https://openalex.org/W2016758618","https://openalex.org/W2050490959","https://openalex.org/W2072881690","https://openalex.org/W2098618539","https://openalex.org/W2120780624","https://openalex.org/W2128860178","https://openalex.org/W2134899277","https://openalex.org/W2157800318","https://openalex.org/W2158030545","https://openalex.org/W2158358034","https://openalex.org/W2160948978","https://openalex.org/W2161666572","https://openalex.org/W2164649389","https://openalex.org/W2310178270","https://openalex.org/W2401767664","https://openalex.org/W2406059742","https://openalex.org/W2539491701","https://openalex.org/W2597608265","https://openalex.org/W2610194067","https://openalex.org/W2916406266","https://openalex.org/W6630173338","https://openalex.org/W6632351574","https://openalex.org/W6680135888","https://openalex.org/W6713628324","https://openalex.org/W7055890792","https://openalex.org/W7073612800"],"related_works":["https://openalex.org/W2020120615","https://openalex.org/W2015192756","https://openalex.org/W1584420410","https://openalex.org/W4300507456","https://openalex.org/W3134782560","https://openalex.org/W2895977819","https://openalex.org/W2982101747","https://openalex.org/W2211216644","https://openalex.org/W2156972708","https://openalex.org/W1983272420"],"abstract_inverted_index":{"This":[0,68],"paper":[1],"surveys":[2],"the":[3,19,42,49,53,56,60,66,71,92,103,122,127],"area":[4],"of":[5,18,46,52,65,126],"biological":[6,31,104],"and":[7,44,59,62,85,109,115,124,130,132],"genomic":[8],"sources":[9,32],"integration,":[10,82,84],"which":[11],"has":[12],"recently":[13],"become":[14],"a":[15,117],"major":[16,94],"focus":[17],"data":[20,47,54],"integration":[21,28,73,96,136],"research":[22],"field.":[23],"The":[24],"challenges":[25],"that":[26,75,98],"an":[27,135],"system":[29,137],"for":[30,102,138],"must":[33],"face":[34],"are":[35],"due":[36],"to":[37,141],"several":[38],"factors":[39],"such":[40],"as":[41],"variety":[43],"amount":[45],"available,":[48],"representational":[50],"heterogeneity":[51],"in":[55],"different":[57],"sources,":[58],"autonomy":[61],"differing":[63],"capabilities":[64],"sources.":[67],"survey":[69],"describes":[70],"main":[72],"approaches":[74,129],"have":[76,99],"been":[77,100],"adopted.":[78],"They":[79],"include":[80],"warehouse":[81],"mediator-based":[83],"navigational":[86],"integration.":[87],"Then":[88],"we":[89,120],"look":[90],"at":[91],"four":[93],"existing":[95],"systems":[97,114,131],"developed":[101],"domain:":[105],"SRS,":[106],"BioKleisli,":[107],"TAMBIS,":[108],"DiscoveryLink.":[110],"After":[111],"analyzing":[112],"these":[113],"mentioning":[116],"few":[118],"others,":[119],"identify":[121],"pros":[123],"cons":[125],"current":[128],"discuss":[133],"what":[134],"biologists":[139],"ought":[140],"be.":[142]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":2},{"year":2018,"cited_by_count":4},{"year":2017,"cited_by_count":5},{"year":2016,"cited_by_count":5},{"year":2015,"cited_by_count":3},{"year":2014,"cited_by_count":6},{"year":2013,"cited_by_count":11},{"year":2012,"cited_by_count":11}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
