{"id":"https://openalex.org/W2062265950","doi":"https://doi.org/10.1145/1024694.1024700","title":"Managing and analyzing carbohydrate data","display_name":"Managing and analyzing carbohydrate data","publication_year":2004,"publication_date":"2004-06-01","ids":{"openalex":"https://openalex.org/W2062265950","doi":"https://doi.org/10.1145/1024694.1024700","mag":"2062265950"},"language":"en","primary_location":{"id":"doi:10.1145/1024694.1024700","is_oa":false,"landing_page_url":"https://doi.org/10.1145/1024694.1024700","pdf_url":null,"source":{"id":"https://openalex.org/S47508943","display_name":"ACM SIGMOD Record","issn_l":"0163-5808","issn":["0163-5808","1943-5835"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319798","host_organization_name":"Association for Computing Machinery","host_organization_lineage":["https://openalex.org/P4310319798"],"host_organization_lineage_names":["Association for Computing Machinery"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"ACM SIGMOD Record","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5042790078","display_name":"Kiyoko F. Aoki\u2010Kinoshita","orcid":"https://orcid.org/0000-0002-6662-8015"},"institutions":[{"id":"https://openalex.org/I22299242","display_name":"Kyoto University","ror":"https://ror.org/02kpeqv85","country_code":"JP","type":"education","lineage":["https://openalex.org/I22299242"]}],"countries":["JP"],"is_corresponding":true,"raw_author_name":"Kiyoko F. Aoki","raw_affiliation_strings":["Kyoto University, Kyoto, Japan","Kyoto University, Kyoto, Japan#TAB#"],"affiliations":[{"raw_affiliation_string":"Kyoto University, Kyoto, Japan","institution_ids":["https://openalex.org/I22299242"]},{"raw_affiliation_string":"Kyoto University, Kyoto, Japan#TAB#","institution_ids":["https://openalex.org/I22299242"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109202903","display_name":"Nobuhisa Ueda","orcid":null},"institutions":[{"id":"https://openalex.org/I22299242","display_name":"Kyoto University","ror":"https://ror.org/02kpeqv85","country_code":"JP","type":"education","lineage":["https://openalex.org/I22299242"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Nobuhisa Ueda","raw_affiliation_strings":["Kyoto University, Kyoto, Japan","Kyoto University, Kyoto, Japan#TAB#"],"affiliations":[{"raw_affiliation_string":"Kyoto University, Kyoto, Japan","institution_ids":["https://openalex.org/I22299242"]},{"raw_affiliation_string":"Kyoto University, Kyoto, Japan#TAB#","institution_ids":["https://openalex.org/I22299242"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001958215","display_name":"Atsuko Yamaguchi","orcid":"https://orcid.org/0000-0001-7538-5337"},"institutions":[{"id":"https://openalex.org/I22299242","display_name":"Kyoto University","ror":"https://ror.org/02kpeqv85","country_code":"JP","type":"education","lineage":["https://openalex.org/I22299242"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Atsuko Yamaguchi","raw_affiliation_strings":["Kyoto University, Kyoto, Japan","Kyoto University, Kyoto, Japan#TAB#"],"affiliations":[{"raw_affiliation_string":"Kyoto University, Kyoto, Japan","institution_ids":["https://openalex.org/I22299242"]},{"raw_affiliation_string":"Kyoto University, Kyoto, Japan#TAB#","institution_ids":["https://openalex.org/I22299242"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016330265","display_name":"Tatsuya Akutsu","orcid":"https://orcid.org/0000-0001-9763-797X"},"institutions":[{"id":"https://openalex.org/I22299242","display_name":"Kyoto University","ror":"https://ror.org/02kpeqv85","country_code":"JP","type":"education","lineage":["https://openalex.org/I22299242"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Tatsuya Akutsu","raw_affiliation_strings":["Kyoto University, Kyoto, Japan","Kyoto University, Kyoto, Japan#TAB#"],"affiliations":[{"raw_affiliation_string":"Kyoto University, Kyoto, Japan","institution_ids":["https://openalex.org/I22299242"]},{"raw_affiliation_string":"Kyoto University, Kyoto, Japan#TAB#","institution_ids":["https://openalex.org/I22299242"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058022821","display_name":"Minoru Kanehisa","orcid":"https://orcid.org/0000-0001-6123-540X"},"institutions":[{"id":"https://openalex.org/I22299242","display_name":"Kyoto University","ror":"https://ror.org/02kpeqv85","country_code":"JP","type":"education","lineage":["https://openalex.org/I22299242"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Minoru Kanehisa","raw_affiliation_strings":["Kyoto University, Kyoto, Japan","Kyoto University, Kyoto, Japan#TAB#"],"affiliations":[{"raw_affiliation_string":"Kyoto University, Kyoto, Japan","institution_ids":["https://openalex.org/I22299242"]},{"raw_affiliation_string":"Kyoto University, Kyoto, Japan#TAB#","institution_ids":["https://openalex.org/I22299242"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5059001924","display_name":"Hiroshi Mamitsuka","orcid":"https://orcid.org/0000-0002-6607-5617"},"institutions":[{"id":"https://openalex.org/I22299242","display_name":"Kyoto University","ror":"https://ror.org/02kpeqv85","country_code":"JP","type":"education","lineage":["https://openalex.org/I22299242"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Hiroshi Mamitsuka","raw_affiliation_strings":["Kyoto University, Kyoto, Japan","Kyoto University, Kyoto, Japan#TAB#"],"affiliations":[{"raw_affiliation_string":"Kyoto University, Kyoto, Japan","institution_ids":["https://openalex.org/I22299242"]},{"raw_affiliation_string":"Kyoto University, Kyoto, Japan#TAB#","institution_ids":["https://openalex.org/I22299242"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5042790078"],"corresponding_institution_ids":["https://openalex.org/I22299242"],"apc_list":null,"apc_paid":null,"fwci":0.4473,"has_fulltext":false,"cited_by_count":4,"citation_normalized_percentile":{"value":0.61572669,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"33","issue":"2","first_page":"33","last_page":"38"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10835","display_name":"Carbohydrate Chemistry and Synthesis","score":0.9979000091552734,"subfield":{"id":"https://openalex.org/subfields/1605","display_name":"Organic Chemistry"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10835","display_name":"Carbohydrate Chemistry and Synthesis","score":0.9979000091552734,"subfield":{"id":"https://openalex.org/subfields/1605","display_name":"Organic Chemistry"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10602","display_name":"Glycosylation and Glycoproteins Research","score":0.9977999925613403,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9943000078201294,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7606232166290283},{"id":"https://openalex.org/keywords/glycan","display_name":"Glycan","score":0.7213509678840637},{"id":"https://openalex.org/keywords/tree","display_name":"Tree (set theory)","score":0.6250219941139221},{"id":"https://openalex.org/keywords/glycobiology","display_name":"Glycobiology","score":0.519531786441803},{"id":"https://openalex.org/keywords/multicellular-organism","display_name":"Multicellular organism","score":0.49082860350608826},{"id":"https://openalex.org/keywords/probabilistic-logic","display_name":"Probabilistic logic","score":0.4637923836708069},{"id":"https://openalex.org/keywords/glycome","display_name":"Glycome","score":0.4339812397956848},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.42562925815582275},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4252397119998932},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.19835898280143738},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.1941089630126953},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.12763941287994385},{"id":"https://openalex.org/keywords/glycoprotein","display_name":"Glycoprotein","score":0.12253725528717041},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.10042333602905273}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7606232166290283},{"id":"https://openalex.org/C206212055","wikidata":"https://www.wikidata.org/wiki/Q2553138","display_name":"Glycan","level":3,"score":0.7213509678840637},{"id":"https://openalex.org/C113174947","wikidata":"https://www.wikidata.org/wiki/Q2859736","display_name":"Tree (set theory)","level":2,"score":0.6250219941139221},{"id":"https://openalex.org/C204641814","wikidata":"https://www.wikidata.org/wiki/Q899224","display_name":"Glycobiology","level":4,"score":0.519531786441803},{"id":"https://openalex.org/C74318829","wikidata":"https://www.wikidata.org/wiki/Q36458","display_name":"Multicellular organism","level":3,"score":0.49082860350608826},{"id":"https://openalex.org/C49937458","wikidata":"https://www.wikidata.org/wiki/Q2599292","display_name":"Probabilistic logic","level":2,"score":0.4637923836708069},{"id":"https://openalex.org/C158650290","wikidata":"https://www.wikidata.org/wiki/Q3063952","display_name":"Glycome","level":4,"score":0.4339812397956848},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.42562925815582275},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4252397119998932},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.19835898280143738},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.1941089630126953},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.12763941287994385},{"id":"https://openalex.org/C108625454","wikidata":"https://www.wikidata.org/wiki/Q187126","display_name":"Glycoprotein","level":2,"score":0.12253725528717041},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.10042333602905273},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/1024694.1024700","is_oa":false,"landing_page_url":"https://doi.org/10.1145/1024694.1024700","pdf_url":null,"source":{"id":"https://openalex.org/S47508943","display_name":"ACM SIGMOD Record","issn_l":"0163-5808","issn":["0163-5808","1943-5835"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319798","host_organization_name":"Association for Computing Machinery","host_organization_lineage":["https://openalex.org/P4310319798"],"host_organization_lineage_names":["Association for Computing Machinery"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"ACM SIGMOD Record","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":25,"referenced_works":["https://openalex.org/W128688334","https://openalex.org/W1486401986","https://openalex.org/W1488310749","https://openalex.org/W1560013842","https://openalex.org/W1573617710","https://openalex.org/W1636244751","https://openalex.org/W1693086232","https://openalex.org/W1868912900","https://openalex.org/W1949917588","https://openalex.org/W1975009259","https://openalex.org/W2007321142","https://openalex.org/W2028639276","https://openalex.org/W2049633694","https://openalex.org/W2070046067","https://openalex.org/W2075509893","https://openalex.org/W2087064593","https://openalex.org/W2099102524","https://openalex.org/W2111727749","https://openalex.org/W2119755031","https://openalex.org/W2142237411","https://openalex.org/W2159580106","https://openalex.org/W3214380909","https://openalex.org/W4238665603","https://openalex.org/W4251775387","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W3083355397","https://openalex.org/W2159558852","https://openalex.org/W3022090045","https://openalex.org/W2195440971","https://openalex.org/W1542049971","https://openalex.org/W2151998416","https://openalex.org/W1974060054","https://openalex.org/W2912086383","https://openalex.org/W3127618022","https://openalex.org/W2307398552"],"abstract_inverted_index":{"One":[0],"of":[1,20,44,69,75,85,213],"the":[2,10,18,42,45,66,86,146,157,164,211],"most":[3],"vital":[4],"molecules":[5],"in":[6,17,27,55,65,79,119,139,142,168],"multicellular":[7,140],"organisms":[8],"is":[9,14,91],"carbohydrate,":[11],"as":[12,99,175],"it":[13],"structurally":[15],"important":[16],"construction":[19],"such":[21,189],"organisms.":[22],"In":[23,94],"fact,":[24],"all":[25],"cells":[26],"nature":[28],"carry":[29],"carbohydrate":[30],"sugar":[31],"chains,":[32],"or":[33],"glycans,":[34],"that":[35,90,122,148,159,190,206],"help":[36],"modulate":[37],"various":[38,137],"cell-cell":[39],"events":[40],"for":[41,109,128,210],"development":[43],"organism.":[46],"Unfortunately,":[47],"informatics":[48],"research":[49],"on":[50],"glycans":[51,98,133,174],"has":[52,123],"been":[53,124],"slow":[54],"comparison":[56],"to":[57,63,81,144,154,161,182],"DNA":[58],"and":[59,126],"proteins,":[60],"largely":[61],"due":[62],"difficulties":[64],"biological":[67],"analysis":[68],"glycan":[70,88,129],"structures.":[71],"Our":[72,113],"work":[73],"consists":[74],"data":[76,89],"engineering":[77],"approaches":[78],"order":[80,143],"glean":[82],"some":[83],"understanding":[84],"current":[87],"publicly":[92],"available.":[93],"particular,":[95],"by":[96,136,172],"modeling":[97],"labeled":[100,176],"unordered":[101],"trees,":[102,178],"we":[103,152,179],"have":[104],"implemented":[105],"a":[106,169,184,194],"tree-matching":[107],"algorithm":[108,114],"measuring":[110],"tree":[111,187,195],"similarity.":[112],"utilizes":[115],"proven":[116],"efficient":[117],"methodologies":[118,205],"computer":[120],"science":[121],"extended":[125],"developed":[127],"data.":[130],"Moreover,":[131],"since":[132],"are":[134],"recognized":[135],"agents":[138],"organisms,":[141],"capture":[145,156],"patterns":[147,192],"might":[149],"be":[150,197],"recognized,":[151],"needed":[153],"somehow":[155],"dependencies":[158],"seem":[160],"range":[162],"beyond":[163],"directly":[165],"connected":[166],"nodes":[167],"tree.":[170],"Therefore,":[171],"defining":[173],"ordered":[177],"were":[180],"able":[181],"develop":[183],"new":[185],"probabilistic":[186],"model":[188],"sibling":[191],"across":[193],"could":[196,207],"mined.":[198],"We":[199],"provide":[200],"promising":[201],"results":[202],"from":[203],"our":[204],"prove":[208],"useful":[209],"future":[212],"glycome":[214],"informatics.":[215]},"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
