{"id":"https://openalex.org/W4405125226","doi":"https://doi.org/10.1142/s0219720024500276","title":"Research on similarity retrieval method based on mass spectral entropy","display_name":"Research on similarity retrieval method based on mass spectral entropy","publication_year":2024,"publication_date":"2024-12-01","ids":{"openalex":"https://openalex.org/W4405125226","doi":"https://doi.org/10.1142/s0219720024500276","pmid":"https://pubmed.ncbi.nlm.nih.gov/39961611"},"language":"en","primary_location":{"id":"doi:10.1142/s0219720024500276","is_oa":false,"landing_page_url":"https://doi.org/10.1142/s0219720024500276","pdf_url":null,"source":{"id":"https://openalex.org/S155349577","display_name":"Journal of Bioinformatics and Computational Biology","issn_l":"0219-7200","issn":["0219-7200","1757-6334"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311754","host_organization_name":"Imperial College Press","host_organization_lineage":["https://openalex.org/P4310311754"],"host_organization_lineage_names":["Imperial College Press"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Bioinformatics and Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5049354684","display_name":"Li Wu","orcid":null},"institutions":[{"id":"https://openalex.org/I10660446","display_name":"Kunming University of Science and Technology","ror":"https://ror.org/00xyeez13","country_code":"CN","type":"education","lineage":["https://openalex.org/I10660446"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Li-Ping Wu","raw_affiliation_strings":["Faculty of Information Engineering and Automation, Kunming University of Science and Technology, Kunming 650500, P. R. China"],"affiliations":[{"raw_affiliation_string":"Faculty of Information Engineering and Automation, Kunming University of Science and Technology, Kunming 650500, P. R. China","institution_ids":["https://openalex.org/I10660446"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100355277","display_name":"Yong Li","orcid":"https://orcid.org/0000-0001-5617-1659"},"institutions":[{"id":"https://openalex.org/I10660446","display_name":"Kunming University of Science and Technology","ror":"https://ror.org/00xyeez13","country_code":"CN","type":"education","lineage":["https://openalex.org/I10660446"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Li Yong","raw_affiliation_strings":["Faculty of Information Engineering and Automation, Kunming University of Science and Technology, Kunming 650500, P. R. China"],"affiliations":[{"raw_affiliation_string":"Faculty of Information Engineering and Automation, Kunming University of Science and Technology, Kunming 650500, P. R. China","institution_ids":["https://openalex.org/I10660446"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068110218","display_name":"Xiang Cheng","orcid":"https://orcid.org/0000-0002-5943-0326"},"institutions":[{"id":"https://openalex.org/I10660446","display_name":"Kunming University of Science and Technology","ror":"https://ror.org/00xyeez13","country_code":"CN","type":"education","lineage":["https://openalex.org/I10660446"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiang Cheng","raw_affiliation_strings":["Faculty of Life Sciences and Technology, Kunming University of Science and Technology, Kunming 650500, P. R. China"],"affiliations":[{"raw_affiliation_string":"Faculty of Life Sciences and Technology, Kunming University of Science and Technology, Kunming 650500, P. R. China","institution_ids":["https://openalex.org/I10660446"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5115602215","display_name":"Yang Zhou","orcid":"https://orcid.org/0000-0002-2945-882X"},"institutions":[{"id":"https://openalex.org/I182386381","display_name":"Zunyi Medical University","ror":"https://ror.org/00g5b0g93","country_code":"CN","type":"education","lineage":["https://openalex.org/I182386381"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yang Zhou","raw_affiliation_strings":["Zunyi Medical University, Zunyi 563000, P. R. China"],"affiliations":[{"raw_affiliation_string":"Zunyi Medical University, Zunyi 563000, P. R. China","institution_ids":["https://openalex.org/I182386381"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5049354684"],"corresponding_institution_ids":["https://openalex.org/I10660446"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.19784275,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"22","issue":"06","first_page":"2450027","last_page":"2450027"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9890999794006348,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9890999794006348,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.48941555619239807},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.4745529294013977},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.46115943789482117},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.45811620354652405},{"id":"https://openalex.org/keywords/entropy","display_name":"Entropy (arrow of time)","score":0.45522934198379517},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3795055150985718},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.13001853227615356}],"concepts":[{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.48941555619239807},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.4745529294013977},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.46115943789482117},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.45811620354652405},{"id":"https://openalex.org/C106301342","wikidata":"https://www.wikidata.org/wiki/Q4117933","display_name":"Entropy (arrow of time)","level":2,"score":0.45522934198379517},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3795055150985718},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.13001853227615356},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":true},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":true},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":true},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019277","descriptor_name":"Entropy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019277","descriptor_name":"Entropy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019277","descriptor_name":"Entropy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019277","descriptor_name":"Entropy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1142/s0219720024500276","is_oa":false,"landing_page_url":"https://doi.org/10.1142/s0219720024500276","pdf_url":null,"source":{"id":"https://openalex.org/S155349577","display_name":"Journal of Bioinformatics and Computational Biology","issn_l":"0219-7200","issn":["0219-7200","1757-6334"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311754","host_organization_name":"Imperial College Press","host_organization_lineage":["https://openalex.org/P4310311754"],"host_organization_lineage_names":["Imperial College Press"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Bioinformatics and Computational Biology","raw_type":"journal-article"},{"id":"pmid:39961611","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/39961611","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of bioinformatics and computational biology","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1305679867","display_name":null,"funder_award_id":"82160787","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":23,"referenced_works":["https://openalex.org/W1546169424","https://openalex.org/W1971121563","https://openalex.org/W1978312864","https://openalex.org/W1995875735","https://openalex.org/W1996366920","https://openalex.org/W2028421938","https://openalex.org/W2038105630","https://openalex.org/W2059327215","https://openalex.org/W2081842591","https://openalex.org/W2087629939","https://openalex.org/W2136367731","https://openalex.org/W2321144071","https://openalex.org/W2412446857","https://openalex.org/W2504691963","https://openalex.org/W2558461359","https://openalex.org/W2925329634","https://openalex.org/W3041845088","https://openalex.org/W3113154334","https://openalex.org/W3199720170","https://openalex.org/W3216027541","https://openalex.org/W4295350387","https://openalex.org/W4301815727","https://openalex.org/W4386923671"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W1979597421","https://openalex.org/W2007980826","https://openalex.org/W2061531152","https://openalex.org/W3002753104","https://openalex.org/W2077600819","https://openalex.org/W2142036596","https://openalex.org/W2072657027","https://openalex.org/W2033914206","https://openalex.org/W2042327336"],"abstract_inverted_index":{"Compound":[0],"identification":[1,173],"in":[2,108,111,156],"small":[3],"molecule":[4],"research":[5],"relies":[6],"on":[7],"comparing":[8],"experimental":[9],"mass":[10,13,43,68,76,88,97,114,129,153,163,175],"spectra":[11,69,77],"with":[12],"spectral":[14,115,154,164],"databases.":[15],"However,":[16],"unequal":[17,150],"data":[18,45,141,155],"lengths":[19,80,151],"often":[20],"lead":[21],"to":[22,104,121],"inefficient":[23],"and":[24,52,83,169],"inaccurate":[25],"retrieval.":[26],"Moreover,":[27],"the":[28,49,53,106,112,123,134,139,147,162,172],"similarity":[29,64,126,157],"calculation":[30,65,93],"methods":[31,47,143],"used":[32,103,120],"by":[33],"commercial":[34],"software":[35],"have":[36,56],"limitations.":[37],"To":[38],"address":[39],"these":[40],"issues,":[41],"two":[42,140],"spectrometry":[44],"processing":[46],"namely":[48],"\"splicing-filling":[50],"method\"":[51,55],"\"matching-filling":[54],"been":[57],"proposed.":[58],"In":[59],"addition,":[60],"an":[61],"information":[62],"entropy-based":[63],"method":[66,74,166],"for":[67,81,171],"is":[70],"presented.":[71],"The":[72,131,159],"alignment":[73,142],"converts":[75],"of":[78,94,125,133,149,152,161,174],"different":[79,128],"unknown":[82],"known":[84],"compounds":[85],"into":[86],"equal-length":[87],"spectra,":[89],"allowing":[90],"more":[91],"accurate":[92],"similarities":[95],"between":[96,127],"spectra.":[98,130,176],"Information":[99],"entropy":[100,165],"measurements":[101],"are":[102,118,167],"quantify":[105],"differences":[107],"intensity":[109],"distributions":[110],"aligned":[113],"data,":[116],"which":[117],"then":[119],"compare":[122],"degree":[124],"results":[132,160],"example":[135],"validation":[136],"show":[137],"that":[138],"can":[144],"effectively":[145],"solve":[146],"problem":[148],"calculation.":[158],"reliable":[168],"suitable":[170]},"counts_by_year":[],"updated_date":"2026-04-07T14:57:38.498316","created_date":"2025-10-10T00:00:00"}
