{"id":"https://openalex.org/W2810627697","doi":"https://doi.org/10.1142/s021972001850018x","title":"WBFQC: A new approach for compressing next-generation sequencing data splitting into homogeneous streams","display_name":"WBFQC: A new approach for compressing next-generation sequencing data splitting into homogeneous streams","publication_year":2018,"publication_date":"2018-06-29","ids":{"openalex":"https://openalex.org/W2810627697","doi":"https://doi.org/10.1142/s021972001850018x","mag":"2810627697","pmid":"https://pubmed.ncbi.nlm.nih.gov/30304988"},"language":"en","primary_location":{"id":"doi:10.1142/s021972001850018x","is_oa":false,"landing_page_url":"https://doi.org/10.1142/s021972001850018x","pdf_url":null,"source":{"id":"https://openalex.org/S155349577","display_name":"Journal of Bioinformatics and Computational Biology","issn_l":"0219-7200","issn":["0219-7200","1757-6334"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311754","host_organization_name":"Imperial College Press","host_organization_lineage":["https://openalex.org/P4310311754"],"host_organization_lineage_names":["Imperial College Press"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Bioinformatics and Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5108229537","display_name":"Sanjeev Kumar","orcid":null},"institutions":[{"id":"https://openalex.org/I152869788","display_name":"Motilal Nehru National Institute of Technology","ror":"https://ror.org/04dp7tp96","country_code":"IN","type":"education","lineage":["https://openalex.org/I152869788"]}],"countries":["IN"],"is_corresponding":true,"raw_author_name":"Sanjeev Kumar","raw_affiliation_strings":["CSED, NIT Allahabad 211004, India"],"affiliations":[{"raw_affiliation_string":"CSED, NIT Allahabad 211004, India","institution_ids":["https://openalex.org/I152869788"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102079330","display_name":"Suneeta Agarwal","orcid":null},"institutions":[{"id":"https://openalex.org/I152869788","display_name":"Motilal Nehru National Institute of Technology","ror":"https://ror.org/04dp7tp96","country_code":"IN","type":"education","lineage":["https://openalex.org/I152869788"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Suneeta Agarwal","raw_affiliation_strings":["CSED, NIT Allahabad 211004, India"],"affiliations":[{"raw_affiliation_string":"CSED, NIT Allahabad 211004, India","institution_ids":["https://openalex.org/I152869788"]}]},{"author_position":"last","author":{"id":null,"display_name":"Ranvijay","orcid":null},"institutions":[{"id":"https://openalex.org/I152869788","display_name":"Motilal Nehru National Institute of Technology","ror":"https://ror.org/04dp7tp96","country_code":"IN","type":"education","lineage":["https://openalex.org/I152869788"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Ranvijay","raw_affiliation_strings":["CSED, NIT Allahabad 211004, India"],"affiliations":[{"raw_affiliation_string":"CSED, NIT Allahabad 211004, India","institution_ids":["https://openalex.org/I152869788"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5108229537"],"corresponding_institution_ids":["https://openalex.org/I152869788"],"apc_list":null,"apc_paid":null,"fwci":0.5077,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.73630732,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":95},"biblio":{"volume":"16","issue":"05","first_page":"1850018","last_page":"1850018"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11181","display_name":"Advanced Data Storage Technologies","score":0.989799976348877,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11321","display_name":"Error Correcting Code Techniques","score":0.9645000100135803,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7927778959274292},{"id":"https://openalex.org/keywords/lossless-compression","display_name":"Lossless compression","score":0.779958963394165},{"id":"https://openalex.org/keywords/data-compression","display_name":"Data compression","score":0.7097917795181274},{"id":"https://openalex.org/keywords/data-stream-mining","display_name":"Data stream mining","score":0.6479966044425964},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.6318669319152832},{"id":"https://openalex.org/keywords/compression-ratio","display_name":"Compression ratio","score":0.4955052137374878},{"id":"https://openalex.org/keywords/scalability","display_name":"Scalability","score":0.47104477882385254},{"id":"https://openalex.org/keywords/compression","display_name":"Compression (physics)","score":0.4228765368461609},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.2860583961009979},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.23146846890449524}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7927778959274292},{"id":"https://openalex.org/C81081738","wikidata":"https://www.wikidata.org/wiki/Q55542","display_name":"Lossless compression","level":3,"score":0.779958963394165},{"id":"https://openalex.org/C78548338","wikidata":"https://www.wikidata.org/wiki/Q2493","display_name":"Data compression","level":2,"score":0.7097917795181274},{"id":"https://openalex.org/C89198739","wikidata":"https://www.wikidata.org/wiki/Q3079880","display_name":"Data stream mining","level":2,"score":0.6479966044425964},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.6318669319152832},{"id":"https://openalex.org/C25797200","wikidata":"https://www.wikidata.org/wiki/Q828137","display_name":"Compression ratio","level":3,"score":0.4955052137374878},{"id":"https://openalex.org/C48044578","wikidata":"https://www.wikidata.org/wiki/Q727490","display_name":"Scalability","level":2,"score":0.47104477882385254},{"id":"https://openalex.org/C180016635","wikidata":"https://www.wikidata.org/wiki/Q2712821","display_name":"Compression (physics)","level":2,"score":0.4228765368461609},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.2860583961009979},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.23146846890449524},{"id":"https://openalex.org/C192562407","wikidata":"https://www.wikidata.org/wiki/Q228736","display_name":"Materials science","level":0,"score":0.0},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.0},{"id":"https://openalex.org/C159985019","wikidata":"https://www.wikidata.org/wiki/Q181790","display_name":"Composite material","level":1,"score":0.0},{"id":"https://openalex.org/C511840579","wikidata":"https://www.wikidata.org/wiki/Q12757","display_name":"Internal combustion engine","level":2,"score":0.0},{"id":"https://openalex.org/C171146098","wikidata":"https://www.wikidata.org/wiki/Q124192","display_name":"Automotive engineering","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D044962","descriptor_name":"Data Compression","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D044962","descriptor_name":"Data Compression","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D044962","descriptor_name":"Data Compression","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1142/s021972001850018x","is_oa":false,"landing_page_url":"https://doi.org/10.1142/s021972001850018x","pdf_url":null,"source":{"id":"https://openalex.org/S155349577","display_name":"Journal of Bioinformatics and Computational Biology","issn_l":"0219-7200","issn":["0219-7200","1757-6334"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311754","host_organization_name":"Imperial College Press","host_organization_lineage":["https://openalex.org/P4310311754"],"host_organization_lineage_names":["Imperial College Press"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Bioinformatics and Computational Biology","raw_type":"journal-article"},{"id":"pmid:30304988","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30304988","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of bioinformatics and computational biology","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Zero hunger","score":0.4699999988079071,"id":"https://metadata.un.org/sdg/2"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":22,"referenced_works":["https://openalex.org/W1488229309","https://openalex.org/W1625645377","https://openalex.org/W1982703709","https://openalex.org/W2020255088","https://openalex.org/W2051929999","https://openalex.org/W2092880969","https://openalex.org/W2096258819","https://openalex.org/W2107845669","https://openalex.org/W2110800670","https://openalex.org/W2114792961","https://openalex.org/W2115431946","https://openalex.org/W2117608012","https://openalex.org/W2124985265","https://openalex.org/W2131694312","https://openalex.org/W2137661542","https://openalex.org/W2137892587","https://openalex.org/W2138196010","https://openalex.org/W2159683766","https://openalex.org/W2164372370","https://openalex.org/W2166588423","https://openalex.org/W2259096502","https://openalex.org/W2323180197"],"related_works":["https://openalex.org/W2948148442","https://openalex.org/W2461250372","https://openalex.org/W2394342941","https://openalex.org/W2169853506","https://openalex.org/W2547124190","https://openalex.org/W2350586049","https://openalex.org/W2385628723","https://openalex.org/W2169871401","https://openalex.org/W3008492011","https://openalex.org/W3080614128"],"abstract_inverted_index":{"Genomic":[0],"data":[1,38,43,63,68,72,108,137],"nowadays":[2],"is":[3,57,81,165],"playing":[4],"a":[5,99],"vital":[6],"role":[7],"in":[8,29,138],"number":[9],"of":[10,32,88,92,140],"fields":[11],"such":[12],"as":[13],"personalized":[14],"medicine,":[15],"forensic,":[16],"drug":[17],"discovery,":[18],"sequence":[19],"alignment":[20],"and":[21,27,74,90,113,117,144,146],"agriculture,":[22],"etc.":[23],"With":[24],"the":[25,30,86,107,126],"advancements":[26],"reduction":[28],"cost":[31],"next-generation":[33],"sequencing":[34],"(NGS)":[35],"technology,":[36],"these":[37],"are":[39,44],"growing":[40],"exponentially.":[41],"NGS":[42,94,136],"being":[45],"generated":[46],"more":[47],"rapidly":[48],"than":[49],"they":[50],"could":[51],"be":[52],"significantly":[53],"analyzed.":[54],"Thus,":[55],"there":[56],"much":[58],"scope":[59],"for":[60,134],"developing":[61],"novel":[62],"compression":[64,79,104,119,141,145,163],"algorithms":[65,120],"to":[66,84],"facilitate":[67],"analysis":[69],"along":[70],"with":[71],"transfer":[73],"storage":[75,91],"directly.":[76],"An":[77,159],"innovative":[78],"technique":[80],"proposed":[82,127],"here":[83,168],"address":[85],"problem":[87],"transmission":[89],"large":[93],"data.":[95,158],"This":[96],"paper":[97],"presents":[98],"lossless":[100],"non-reference-based":[101],"FastQ":[102,162],"file":[103],"approach,":[105],"segregating":[106],"into":[109],"three":[110],"different":[111],"streams":[112],"then":[114],"applying":[115],"appropriate":[116],"efficient":[118],"on":[121],"each.":[122],"Experiments":[123],"show":[124],"that":[125],"approach":[128],"(WBFQC)":[129],"outperforms":[130],"other":[131],"state-of-the-art":[132],"approaches":[133],"compressing":[135],"terms":[139],"ratio":[142],"(CR),":[143],"decompression":[147],"time.":[148],"It":[149],"also":[150,166],"has":[151],"random":[152],"access":[153],"capability":[154],"over":[155],"compressed":[156],"genomic":[157],"open":[160],"source":[161],"tool":[164],"provided":[167],"(":[169],"http://www.algorithm-skg.com/wbfqc/home.html":[170],").":[171]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":1}],"updated_date":"2026-04-16T08:26:57.006410","created_date":"2025-10-10T00:00:00"}