{"id":"https://openalex.org/W2294028555","doi":"https://doi.org/10.1142/s0219720016410080","title":"Parallel workflow manager for non-parallel bioinformatic applications to solve large-scale biological problems on a supercomputer","display_name":"Parallel workflow manager for non-parallel bioinformatic applications to solve large-scale biological problems on a supercomputer","publication_year":2016,"publication_date":"2016-03-06","ids":{"openalex":"https://openalex.org/W2294028555","doi":"https://doi.org/10.1142/s0219720016410080","mag":"2294028555","pmid":"https://pubmed.ncbi.nlm.nih.gov/27122320"},"language":"en","primary_location":{"id":"doi:10.1142/s0219720016410080","is_oa":false,"landing_page_url":"https://doi.org/10.1142/s0219720016410080","pdf_url":null,"source":{"id":"https://openalex.org/S155349577","display_name":"Journal of Bioinformatics and Computational Biology","issn_l":"0219-7200","issn":["0219-7200","1757-6334"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311754","host_organization_name":"Imperial College Press","host_organization_lineage":["https://openalex.org/P4310311754"],"host_organization_lineage_names":["Imperial College Press"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Bioinformatics and Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5028479633","display_name":"Dmitry Suplatov","orcid":"https://orcid.org/0000-0002-7054-3487"},"institutions":[{"id":"https://openalex.org/I19880235","display_name":"Lomonosov Moscow State University","ror":"https://ror.org/010pmpe69","country_code":"RU","type":"education","lineage":["https://openalex.org/I19880235"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Dmitry Suplatov","raw_affiliation_strings":["Lomonosov Moscow State University, Belozersky Institute of Physicochemical Biology and Faculty of Bioengineering and Bioinformatics, Leninskiye Gory 1-73, Moscow 119991, Russia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Lomonosov Moscow State University, Belozersky Institute of Physicochemical Biology and Faculty of Bioengineering and Bioinformatics, Leninskiye Gory 1-73, Moscow 119991, Russia","institution_ids":["https://openalex.org/I19880235"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005607792","display_name":"\u041d. \u041d. \u041f\u043e\u043f\u043e\u0432\u0430","orcid":"https://orcid.org/0000-0002-3339-1365"},"institutions":[{"id":"https://openalex.org/I19880235","display_name":"Lomonosov Moscow State University","ror":"https://ror.org/010pmpe69","country_code":"RU","type":"education","lineage":["https://openalex.org/I19880235"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Nina Popova","raw_affiliation_strings":["Lomonosov Moscow State University, Faculty of Computational Mathematics and Cybernetics, Leninskiye Gory 1-52, Moscow 119991, Russia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Lomonosov Moscow State University, Faculty of Computational Mathematics and Cybernetics, Leninskiye Gory 1-52, Moscow 119991, Russia","institution_ids":["https://openalex.org/I19880235"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067290189","display_name":"Sergey Zhumatiy","orcid":"https://orcid.org/0000-0001-5770-3071"},"institutions":[{"id":"https://openalex.org/I19880235","display_name":"Lomonosov Moscow State University","ror":"https://ror.org/010pmpe69","country_code":"RU","type":"education","lineage":["https://openalex.org/I19880235"]},{"id":"https://openalex.org/I4210159227","display_name":"Institute of Mathematical Problems of Biology","ror":"https://ror.org/04xtpdj18","country_code":"RU","type":"facility","lineage":["https://openalex.org/I1313323035","https://openalex.org/I4210124601","https://openalex.org/I4210159227"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Sergey Zhumatiy","raw_affiliation_strings":["Lomonosov Moscow State University, Research Computing Center, Leninskiye Gory 1-4, Moscow 119991, Russia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Lomonosov Moscow State University, Research Computing Center, Leninskiye Gory 1-4, Moscow 119991, Russia","institution_ids":["https://openalex.org/I19880235","https://openalex.org/I4210159227"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044421524","display_name":"Vladimir Voevodin","orcid":"https://orcid.org/0000-0001-6036-5106"},"institutions":[{"id":"https://openalex.org/I19880235","display_name":"Lomonosov Moscow State University","ror":"https://ror.org/010pmpe69","country_code":"RU","type":"education","lineage":["https://openalex.org/I19880235"]},{"id":"https://openalex.org/I4210159227","display_name":"Institute of Mathematical Problems of Biology","ror":"https://ror.org/04xtpdj18","country_code":"RU","type":"facility","lineage":["https://openalex.org/I1313323035","https://openalex.org/I4210124601","https://openalex.org/I4210159227"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Vladimir Voevodin","raw_affiliation_strings":["Lomonosov Moscow State University, Faculty of Computational Mathematics and Cybernetics, Leninskiye Gory 1-52, Moscow 119991, Russia","Lomonosov Moscow State University, Research Computing Center, Leninskiye Gory 1-4, Moscow 119991, Russia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Lomonosov Moscow State University, Faculty of Computational Mathematics and Cybernetics, Leninskiye Gory 1-52, Moscow 119991, Russia","institution_ids":["https://openalex.org/I19880235"]},{"raw_affiliation_string":"Lomonosov Moscow State University, Research Computing Center, Leninskiye Gory 1-4, Moscow 119991, Russia","institution_ids":["https://openalex.org/I19880235","https://openalex.org/I4210159227"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5033744508","display_name":"Vytas K. \u0160vedas","orcid":"https://orcid.org/0000-0002-1664-0307"},"institutions":[{"id":"https://openalex.org/I19880235","display_name":"Lomonosov Moscow State University","ror":"https://ror.org/010pmpe69","country_code":"RU","type":"education","lineage":["https://openalex.org/I19880235"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Vytas \u0160vedas","raw_affiliation_strings":["Lomonosov Moscow State University, Belozersky Institute of Physicochemical Biology and Faculty of Bioengineering and Bioinformatics, Leninskiye Gory 1-73, Moscow 119991, Russia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Lomonosov Moscow State University, Belozersky Institute of Physicochemical Biology and Faculty of Bioengineering and Bioinformatics, Leninskiye Gory 1-73, Moscow 119991, Russia","institution_ids":["https://openalex.org/I19880235"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":1.567,"has_fulltext":false,"cited_by_count":13,"citation_normalized_percentile":{"value":0.83058009,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"14","issue":"02","first_page":"1641008","last_page":"1641008"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9943000078201294,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9943000078201294,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9923999905586243,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9800000190734863,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/supercomputer","display_name":"Supercomputer","score":0.8831571936607361},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8476375937461853},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.6345492601394653},{"id":"https://openalex.org/keywords/distributed-computing","display_name":"Distributed computing","score":0.6086831092834473},{"id":"https://openalex.org/keywords/implementation","display_name":"Implementation","score":0.5429875254631042},{"id":"https://openalex.org/keywords/parallel-computing","display_name":"Parallel computing","score":0.4683641195297241},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.4533036947250366},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.4498264193534851},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.4383341073989868},{"id":"https://openalex.org/keywords/node","display_name":"Node (physics)","score":0.4296371042728424},{"id":"https://openalex.org/keywords/resource","display_name":"Resource (disambiguation)","score":0.42866289615631104},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.1768045425415039},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.14558842778205872},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.1408955454826355},{"id":"https://openalex.org/keywords/computer-network","display_name":"Computer network","score":0.12930253148078918}],"concepts":[{"id":"https://openalex.org/C83283714","wikidata":"https://www.wikidata.org/wiki/Q121117","display_name":"Supercomputer","level":2,"score":0.8831571936607361},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8476375937461853},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.6345492601394653},{"id":"https://openalex.org/C120314980","wikidata":"https://www.wikidata.org/wiki/Q180634","display_name":"Distributed computing","level":1,"score":0.6086831092834473},{"id":"https://openalex.org/C26713055","wikidata":"https://www.wikidata.org/wiki/Q245962","display_name":"Implementation","level":2,"score":0.5429875254631042},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.4683641195297241},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.4533036947250366},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.4498264193534851},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.4383341073989868},{"id":"https://openalex.org/C62611344","wikidata":"https://www.wikidata.org/wiki/Q1062658","display_name":"Node (physics)","level":2,"score":0.4296371042728424},{"id":"https://openalex.org/C206345919","wikidata":"https://www.wikidata.org/wiki/Q20380951","display_name":"Resource (disambiguation)","level":2,"score":0.42866289615631104},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.1768045425415039},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.14558842778205872},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.1408955454826355},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.12930253148078918},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C66938386","wikidata":"https://www.wikidata.org/wiki/Q633538","display_name":"Structural engineering","level":1,"score":0.0},{"id":"https://openalex.org/C187736073","wikidata":"https://www.wikidata.org/wiki/Q2920921","display_name":"Management","level":1,"score":0.0},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003205","descriptor_name":"Computing Methodologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003205","descriptor_name":"Computing Methodologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003205","descriptor_name":"Computing Methodologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000295","qualifier_name":"instrumentation","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000295","qualifier_name":"instrumentation","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000295","qualifier_name":"instrumentation","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057188","descriptor_name":"Workflow","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057188","descriptor_name":"Workflow","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057188","descriptor_name":"Workflow","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1142/s0219720016410080","is_oa":false,"landing_page_url":"https://doi.org/10.1142/s0219720016410080","pdf_url":null,"source":{"id":"https://openalex.org/S155349577","display_name":"Journal of Bioinformatics and Computational Biology","issn_l":"0219-7200","issn":["0219-7200","1757-6334"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311754","host_organization_name":"Imperial College Press","host_organization_lineage":["https://openalex.org/P4310311754"],"host_organization_lineage_names":["Imperial College Press"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Bioinformatics and Computational Biology","raw_type":"journal-article"},{"id":"pmid:27122320","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/27122320","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of bioinformatics and computational biology","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G8802544100","display_name":null,"funder_award_id":"14-07-00437","funder_id":"https://openalex.org/F4320321079","funder_display_name":"Russian Foundation for Basic Research"},{"id":"https://openalex.org/G8826790360","display_name":null,"funder_award_id":"15-14-00069","funder_id":"https://openalex.org/F4320324099","funder_display_name":"Russian Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320321079","display_name":"Russian Foundation for Basic Research","ror":"https://ror.org/02mh1ke95"},{"id":"https://openalex.org/F4320324099","display_name":"Russian Science Foundation","ror":"https://ror.org/03y2gwe85"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":22,"referenced_works":["https://openalex.org/W1964141703","https://openalex.org/W1968561201","https://openalex.org/W1988270240","https://openalex.org/W1996431131","https://openalex.org/W2007966650","https://openalex.org/W2013760445","https://openalex.org/W2027343639","https://openalex.org/W2029335938","https://openalex.org/W2072207870","https://openalex.org/W2083612007","https://openalex.org/W2086824985","https://openalex.org/W2104437034","https://openalex.org/W2116329058","https://openalex.org/W2118534690","https://openalex.org/W2139119119","https://openalex.org/W2140269672","https://openalex.org/W2150974226","https://openalex.org/W2150981663","https://openalex.org/W2165565773","https://openalex.org/W2169244518","https://openalex.org/W2170574884","https://openalex.org/W4255252731"],"related_works":["https://openalex.org/W2384867379","https://openalex.org/W2329539859","https://openalex.org/W2227905990","https://openalex.org/W2765823764","https://openalex.org/W3214280620","https://openalex.org/W3191490922","https://openalex.org/W2794038527","https://openalex.org/W2151092287","https://openalex.org/W2523801036","https://openalex.org/W1599154403"],"abstract_inverted_index":{"Rapid":[0],"expansion":[1],"of":[2,25,28,35,90,115,128,147,221,238],"online":[3],"resources":[4],"providing":[5],"access":[6],"to":[7,20,32,43,71,83,105,124,143,162,189,196,203,212,234],"genomic,":[8],"structural,":[9],"and":[10,53,175,177,218,256],"functional":[11],"information":[12,164],"associated":[13],"with":[14],"biological":[15,29,107,239],"macromolecules":[16],"opens":[17],"an":[18,101],"opportunity":[19],"gain":[21],"a":[22,73,77,87,96,111,121,135,250],"deeper":[23],"understanding":[24],"the":[26,92,151,210],"mechanisms":[27],"processes":[30],"due":[31,82],"systematic":[33],"analysis":[34],"large":[36,88],"datasets.":[37],"This,":[38],"however,":[39,81],"requires":[40,95,109],"novel":[41],"strategies":[42],"optimally":[44],"utilize":[45],"computer":[46,137],"processing":[47,187],"power.":[48,99],"Some":[49],"methods":[50,117],"in":[51,246],"bioinformatics":[52],"molecular":[54],"modeling":[55],"require":[56],"extensive":[57],"computational":[58,103],"resources.":[59],"Other":[60],"algorithms":[61,149],"have":[62],"fast":[63,130],"implementations":[64,146],"which":[65],"take":[66],"at":[67],"most":[68],"several":[69],"hours":[70],"analyze":[72],"common":[74],"input":[75],"on":[76,185,223,249],"modern":[78],"desktop":[79],"station,":[80],"multiple":[84,126],"invocations":[85,127],"for":[86,172,179],"number":[89],"subtasks":[91,222],"full":[93],"task":[94,173],"significant":[97],"computing":[98],"Therefore,":[100],"efficient":[102],"solution":[104],"large-scale":[106],"problems":[108],"both":[110],"wise":[112],"parallel":[113,152,247],"implementation":[114],"resource-hungry":[116],"as":[118,120],"well":[119],"smart":[122],"workflow":[123],"manage":[125],"relatively":[129],"algorithms.":[131],"In":[132],"this":[133,229],"work,":[134],"new":[136],"software":[138],"mpiWrapper":[139,199],"has":[140,159],"been":[141,160],"developed":[142],"accommodate":[144],"non-parallel":[145,244],"scientific":[148],"within":[150],"supercomputing":[153],"environment.":[154],"The":[155,198,252],"Message":[156],"Passing":[157],"Interface":[158],"implemented":[161],"exchange":[163],"between":[165],"nodes.":[166],"Two":[167],"specialized":[168],"threads":[169],"-":[170,182],"one":[171],"management":[174],"communication,":[176],"another":[178],"subtask":[180],"execution":[181],"are":[183,258],"invoked":[184],"each":[186],"unit":[188],"avoid":[190],"deadlock":[191],"while":[192],"using":[193],"blocking":[194],"calls":[195],"MPI.":[197],"can":[200,231],"be":[201,232],"used":[202,233],"launch":[204],"all":[205],"conventional":[206],"Linux":[207],"applications":[208],"without":[209],"need":[211],"modify":[213],"their":[214],"original":[215],"source":[216,254],"codes":[217],"supports":[219],"resubmission":[220],"node":[224],"failure.":[225],"We":[226],"show":[227],"that":[228],"approach":[230],"process":[235],"huge":[236],"amounts":[237],"data":[240],"efficiently":[241],"by":[242],"running":[243],"programs":[245],"mode":[248],"supercomputer.":[251],"C++":[253],"code":[255],"documentation":[257],"available":[259],"from":[260],"http://biokinet.belozersky.msu.ru/mpiWrapper":[261],".":[262]},"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":4},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":1}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
