{"id":"https://openalex.org/W2263890565","doi":"https://doi.org/10.1142/s0219720016410043","title":"Search for conserved amino acid residues of the \u03b1-crystallin proteins of vertebrates","display_name":"Search for conserved amino acid residues of the \u03b1-crystallin proteins of vertebrates","publication_year":2016,"publication_date":"2016-02-24","ids":{"openalex":"https://openalex.org/W2263890565","doi":"https://doi.org/10.1142/s0219720016410043","mag":"2263890565","pmid":"https://pubmed.ncbi.nlm.nih.gov/26972563"},"language":"en","primary_location":{"id":"doi:10.1142/s0219720016410043","is_oa":false,"landing_page_url":"https://doi.org/10.1142/s0219720016410043","pdf_url":null,"source":{"id":"https://openalex.org/S155349577","display_name":"Journal of Bioinformatics and Computational Biology","issn_l":"0219-7200","issn":["0219-7200","1757-6334"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311754","host_organization_name":"Imperial College Press","host_organization_lineage":["https://openalex.org/P4310311754"],"host_organization_lineage_names":["Imperial College Press"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Bioinformatics and Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5083147802","display_name":"Nikita G. Shiliaev","orcid":"https://orcid.org/0000-0002-6248-7008"},"institutions":[{"id":"https://openalex.org/I4210137602","display_name":"Institute of Protein Research","ror":"https://ror.org/0489f0s93","country_code":"RU","type":"facility","lineage":["https://openalex.org/I1313323035","https://openalex.org/I4210129690","https://openalex.org/I4210137602"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Nikita G. Shiliaev","raw_affiliation_strings":["Institute of Protein Research, Russian Academy of Sciences, Institutskaya str., 4 Pushchino, Moscow Region 142290, Russia"],"affiliations":[{"raw_affiliation_string":"Institute of Protein Research, Russian Academy of Sciences, Institutskaya str., 4 Pushchino, Moscow Region 142290, Russia","institution_ids":["https://openalex.org/I4210137602"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063628201","display_name":"Olga M. Selivanova","orcid":null},"institutions":[{"id":"https://openalex.org/I4210137602","display_name":"Institute of Protein Research","ror":"https://ror.org/0489f0s93","country_code":"RU","type":"facility","lineage":["https://openalex.org/I1313323035","https://openalex.org/I4210129690","https://openalex.org/I4210137602"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Olga M. Selivanova","raw_affiliation_strings":["Institute of Protein Research, Russian Academy of Sciences, Institutskaya str., 4 Pushchino, Moscow Region 142290, Russia"],"affiliations":[{"raw_affiliation_string":"Institute of Protein Research, Russian Academy of Sciences, Institutskaya str., 4 Pushchino, Moscow Region 142290, Russia","institution_ids":["https://openalex.org/I4210137602"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5023828983","display_name":"Oxana V. Galzitskaya","orcid":"https://orcid.org/0000-0002-3962-1520"},"institutions":[{"id":"https://openalex.org/I4210137602","display_name":"Institute of Protein Research","ror":"https://ror.org/0489f0s93","country_code":"RU","type":"facility","lineage":["https://openalex.org/I1313323035","https://openalex.org/I4210129690","https://openalex.org/I4210137602"]}],"countries":["RU"],"is_corresponding":true,"raw_author_name":"Oxana V. Galzitskaya","raw_affiliation_strings":["Institute of Protein Research, Russian Academy of Sciences, Institutskaya str., 4 Pushchino, Moscow Region 142290, Russia"],"affiliations":[{"raw_affiliation_string":"Institute of Protein Research, Russian Academy of Sciences, Institutskaya str., 4 Pushchino, Moscow Region 142290, Russia","institution_ids":["https://openalex.org/I4210137602"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5023828983"],"corresponding_institution_ids":["https://openalex.org/I4210137602"],"apc_list":null,"apc_paid":null,"fwci":0.5002,"has_fulltext":false,"cited_by_count":8,"citation_normalized_percentile":{"value":0.69342302,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":95},"biblio":{"volume":"14","issue":"02","first_page":"1641004","last_page":"1641004"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11480","display_name":"Connexins and lens biology","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11480","display_name":"Connexins and lens biology","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10934","display_name":"Heat shock proteins research","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12232","display_name":"Yersinia bacterium, plague, ectoparasites research","score":0.9879999756813049,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/crystallin","display_name":"Crystallin","score":0.8712161779403687},{"id":"https://openalex.org/keywords/amino-acid","display_name":"Amino acid","score":0.696161687374115},{"id":"https://openalex.org/keywords/valine","display_name":"Valine","score":0.6931937336921692},{"id":"https://openalex.org/keywords/isoleucine","display_name":"Isoleucine","score":0.5982111096382141},{"id":"https://openalex.org/keywords/histidine","display_name":"Histidine","score":0.5369299650192261},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.5293594002723694},{"id":"https://openalex.org/keywords/proteome","display_name":"Proteome","score":0.5269193053245544},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5165663957595825},{"id":"https://openalex.org/keywords/leucine","display_name":"Leucine","score":0.510197639465332},{"id":"https://openalex.org/keywords/phenylalanine","display_name":"Phenylalanine","score":0.5008985996246338},{"id":"https://openalex.org/keywords/conserved-sequence","display_name":"Conserved sequence","score":0.47236138582229614},{"id":"https://openalex.org/keywords/serine","display_name":"Serine","score":0.4519462585449219},{"id":"https://openalex.org/keywords/peptide-sequence","display_name":"Peptide sequence","score":0.382438063621521},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.3580765724182129}],"concepts":[{"id":"https://openalex.org/C7263354","wikidata":"https://www.wikidata.org/wiki/Q2992167","display_name":"Crystallin","level":2,"score":0.8712161779403687},{"id":"https://openalex.org/C515207424","wikidata":"https://www.wikidata.org/wiki/Q8066","display_name":"Amino acid","level":2,"score":0.696161687374115},{"id":"https://openalex.org/C2777573094","wikidata":"https://www.wikidata.org/wiki/Q483752","display_name":"Valine","level":3,"score":0.6931937336921692},{"id":"https://openalex.org/C2777305461","wikidata":"https://www.wikidata.org/wiki/Q484940","display_name":"Isoleucine","level":4,"score":0.5982111096382141},{"id":"https://openalex.org/C2778460671","wikidata":"https://www.wikidata.org/wiki/Q485277","display_name":"Histidine","level":3,"score":0.5369299650192261},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.5293594002723694},{"id":"https://openalex.org/C104397665","wikidata":"https://www.wikidata.org/wiki/Q860947","display_name":"Proteome","level":2,"score":0.5269193053245544},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5165663957595825},{"id":"https://openalex.org/C2776580952","wikidata":"https://www.wikidata.org/wiki/Q483745","display_name":"Leucine","level":3,"score":0.510197639465332},{"id":"https://openalex.org/C2777431362","wikidata":"https://www.wikidata.org/wiki/Q170545","display_name":"Phenylalanine","level":3,"score":0.5008985996246338},{"id":"https://openalex.org/C199216141","wikidata":"https://www.wikidata.org/wiki/Q4995178","display_name":"Conserved sequence","level":4,"score":0.47236138582229614},{"id":"https://openalex.org/C2776414213","wikidata":"https://www.wikidata.org/wiki/Q183290","display_name":"Serine","level":3,"score":0.4519462585449219},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.382438063621521},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.3580765724182129},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C181199279","wikidata":"https://www.wikidata.org/wiki/Q8047","display_name":"Enzyme","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000596","descriptor_name":"Amino Acids","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D000596","descriptor_name":"Amino Acids","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D000596","descriptor_name":"Amino Acids","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014714","descriptor_name":"Vertebrates","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014714","descriptor_name":"Vertebrates","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014714","descriptor_name":"Vertebrates","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017124","descriptor_name":"Conserved Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017124","descriptor_name":"Conserved Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017124","descriptor_name":"Conserved Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D038201","descriptor_name":"alpha-Crystallins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D038201","descriptor_name":"alpha-Crystallins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D038201","descriptor_name":"alpha-Crystallins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1142/s0219720016410043","is_oa":false,"landing_page_url":"https://doi.org/10.1142/s0219720016410043","pdf_url":null,"source":{"id":"https://openalex.org/S155349577","display_name":"Journal of Bioinformatics and Computational Biology","issn_l":"0219-7200","issn":["0219-7200","1757-6334"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311754","host_organization_name":"Imperial College Press","host_organization_lineage":["https://openalex.org/P4310311754"],"host_organization_lineage_names":["Imperial College Press"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Bioinformatics and Computational Biology","raw_type":"journal-article"},{"id":"pmid:26972563","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/26972563","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of bioinformatics and computational biology","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":57,"referenced_works":["https://openalex.org/W149427494","https://openalex.org/W782145927","https://openalex.org/W1489466277","https://openalex.org/W1501703174","https://openalex.org/W1574972176","https://openalex.org/W1581064972","https://openalex.org/W1590407931","https://openalex.org/W1596101273","https://openalex.org/W1827875159","https://openalex.org/W1964298460","https://openalex.org/W1967293793","https://openalex.org/W1968663827","https://openalex.org/W1972518511","https://openalex.org/W1982561342","https://openalex.org/W1991310329","https://openalex.org/W1991666936","https://openalex.org/W1993128802","https://openalex.org/W1995141949","https://openalex.org/W1996444327","https://openalex.org/W2003149545","https://openalex.org/W2010958261","https://openalex.org/W2012490977","https://openalex.org/W2013288236","https://openalex.org/W2014432436","https://openalex.org/W2014496529","https://openalex.org/W2018084854","https://openalex.org/W2031908838","https://openalex.org/W2044031095","https://openalex.org/W2044690163","https://openalex.org/W2047579358","https://openalex.org/W2048141156","https://openalex.org/W2057033170","https://openalex.org/W2060644195","https://openalex.org/W2062660916","https://openalex.org/W2065240973","https://openalex.org/W2065335617","https://openalex.org/W2071038701","https://openalex.org/W2075309922","https://openalex.org/W2078067526","https://openalex.org/W2080457513","https://openalex.org/W2083038393","https://openalex.org/W2084711385","https://openalex.org/W2086963517","https://openalex.org/W2089580276","https://openalex.org/W2091261717","https://openalex.org/W2098466396","https://openalex.org/W2101476524","https://openalex.org/W2127033103","https://openalex.org/W2128064586","https://openalex.org/W2137015675","https://openalex.org/W2154160468","https://openalex.org/W2157365525","https://openalex.org/W2157873167","https://openalex.org/W2160378127","https://openalex.org/W2166500974","https://openalex.org/W2174043882","https://openalex.org/W4251647708"],"related_works":["https://openalex.org/W3135453464","https://openalex.org/W2067852468","https://openalex.org/W1951002276","https://openalex.org/W1907722009","https://openalex.org/W2049497674","https://openalex.org/W2027469957","https://openalex.org/W1786140562","https://openalex.org/W2412613989","https://openalex.org/W2248030429","https://openalex.org/W2064436044"],"abstract_inverted_index":{"[Formula:":[0,19,42,60,116,173],"see":[1,20,43,61,117,174],"text]-crystallin":[2,44,62,118],"is":[3,63,77,92,202,205],"the":[4,13,31,38,55,69,74,81,95,106,111,124,180,191,199,208],"major":[5],"eye":[6],"lens":[7,27,34],"protein":[8,16],"and":[9,97,120,150,158,195],"a":[10],"member":[11],"of":[12,33,41,59,115,126,164],"small":[14],"heat-shock":[15],"(sHsp)":[17],"family.":[18],"text]-crystallins":[21,175],"have":[22,88,133],"been":[23],"shown":[24],"to":[25,48,105],"support":[26],"clarity":[28],"by":[29],"preventing":[30],"aggregation":[32],"proteins.":[35],"We":[36,67,87,109,188],"performed":[37],"bioinformatics":[39],"analysis":[40],"sequences":[45],"from":[46,176],"vertebrates":[47,177],"find":[49],"conserved":[50,96],"amino":[51,112,129,137,167],"acid":[52,113,130,138],"residues":[53,139],"as":[54,140],"three-dimensional":[56],"(3D)":[57],"structure":[58],"not":[64],"identified":[65],"yet.":[66],"are":[68],"first":[70],"who":[71],"demonstrated":[72],"that":[73,90,135,190],"N-terminal":[75],"region":[76],"conservative":[78],"along":[79],"with":[80],"central":[82],"domain":[83],"for":[84],"vertebrate":[85],"organisms.":[86],"found":[89,134],"there":[91],"correlation":[93],"between":[94,193],"structured":[98,107],"regions.":[99,108],"Moreover,":[100],"amyloidogenic":[101],"regions":[102],"also":[103],"correspond":[104],"analyzed":[110],"composition":[114],"A":[119,157,194],"B":[121,159,196],"chains.":[122],"Analyzing":[123],"occurrence":[125],"each":[127],"individual":[128],"residue,":[131],"we":[132],"such":[136],"leucine,":[141],"serine,":[142],"lysine,":[143],"proline,":[144],"phenylalanine,":[145],"histidine,":[146],"isoleucine,":[147],"glutamic":[148],"acid,":[149],"valine":[151],"change":[152],"their":[153],"content":[154],"simultaneously":[155],"in":[156,161,172,182,198],"chains":[160,197],"different":[162],"classes":[163],"vertebrates.":[165],"Aromatic":[166],"acids":[168],"occur":[169],"more":[170],"often":[171],"than":[178,207],"on":[179],"average":[181],"proteins":[183],"among":[184],"17":[185],"animal":[186],"proteomes.":[187],"obtained":[189],"identity":[192],"mammalian":[200],"group":[201],"0.35,":[203],"which":[204],"lower":[206],"published":[209],"0.60.":[210]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
