{"id":"https://openalex.org/W2168487231","doi":"https://doi.org/10.1142/s0219720010004719","title":"EXCLUSIVE SEQUENCES OF DIFFERENT GENOMES","display_name":"EXCLUSIVE SEQUENCES OF DIFFERENT GENOMES","publication_year":2010,"publication_date":"2010-03-23","ids":{"openalex":"https://openalex.org/W2168487231","doi":"https://doi.org/10.1142/s0219720010004719","mag":"2168487231","pmid":"https://pubmed.ncbi.nlm.nih.gov/20556860"},"language":"en","primary_location":{"id":"doi:10.1142/s0219720010004719","is_oa":false,"landing_page_url":"https://doi.org/10.1142/s0219720010004719","pdf_url":null,"source":{"id":"https://openalex.org/S155349577","display_name":"Journal of Bioinformatics and Computational Biology","issn_l":"0219-7200","issn":["0219-7200","1757-6334"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311754","host_organization_name":"Imperial College Press","host_organization_lineage":["https://openalex.org/P4310311754"],"host_organization_lineage_names":["Imperial College Press"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Bioinformatics and Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5083946667","display_name":"Sergey I. Mitrofanov","orcid":"https://orcid.org/0000-0003-0358-0568"},"institutions":[{"id":"https://openalex.org/I19880235","display_name":"Lomonosov Moscow State University","ror":"https://ror.org/010pmpe69","country_code":"RU","type":"education","lineage":["https://openalex.org/I19880235"]}],"countries":["RU"],"is_corresponding":true,"raw_author_name":"SERGEY I. MITROFANOV","raw_affiliation_strings":["Faculty of Bioengineering and Bioinformatics, Moscow State University, Moscow, Russia"],"affiliations":[{"raw_affiliation_string":"Faculty of Bioengineering and Bioinformatics, Moscow State University, Moscow, Russia","institution_ids":["https://openalex.org/I19880235"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038592787","display_name":"Alexander Y. Panchin","orcid":"https://orcid.org/0000-0002-3422-6564"},"institutions":[{"id":"https://openalex.org/I19880235","display_name":"Lomonosov Moscow State University","ror":"https://ror.org/010pmpe69","country_code":"RU","type":"education","lineage":["https://openalex.org/I19880235"]},{"id":"https://openalex.org/I4210107660","display_name":"Institute for Information Transmission Problems","ror":"https://ror.org/013w2d378","country_code":"RU","type":"facility","lineage":["https://openalex.org/I4210107660"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"ALEXANDER Y. PANCHIN","raw_affiliation_strings":["Faculty of Bioengineering and Bioinformatics, Moscow State University, Moscow, Russia","Institute for Information Transmission Problems, Russian Academy of Sciences, Moscow, Russia"],"affiliations":[{"raw_affiliation_string":"Faculty of Bioengineering and Bioinformatics, Moscow State University, Moscow, Russia","institution_ids":["https://openalex.org/I19880235"]},{"raw_affiliation_string":"Institute for Information Transmission Problems, Russian Academy of Sciences, Moscow, Russia","institution_ids":["https://openalex.org/I4210107660"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076136987","display_name":"Sergey Spirin","orcid":"https://orcid.org/0000-0002-8041-1808"},"institutions":[{"id":"https://openalex.org/I19880235","display_name":"Lomonosov Moscow State University","ror":"https://ror.org/010pmpe69","country_code":"RU","type":"education","lineage":["https://openalex.org/I19880235"]},{"id":"https://openalex.org/I4210121062","display_name":"Research Institute for System Studies","ror":"https://ror.org/02smvmz76","country_code":"RU","type":"facility","lineage":["https://openalex.org/I4210121062"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"SERGEI A. SPIRIN","raw_affiliation_strings":["A.N. Belozersky Institute of Physical-Chemical Biology, Moscow State University, Moscow, Russia","Scientific Research Institute for System Studies, (NIISI RAN), Moscow, Russia"],"affiliations":[{"raw_affiliation_string":"A.N. Belozersky Institute of Physical-Chemical Biology, Moscow State University, Moscow, Russia","institution_ids":["https://openalex.org/I19880235"]},{"raw_affiliation_string":"Scientific Research Institute for System Studies, (NIISI RAN), Moscow, Russia","institution_ids":["https://openalex.org/I4210121062"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056758947","display_name":"Andrei V. Alexeevski","orcid":"https://orcid.org/0000-0001-7939-9939"},"institutions":[{"id":"https://openalex.org/I19880235","display_name":"Lomonosov Moscow State University","ror":"https://ror.org/010pmpe69","country_code":"RU","type":"education","lineage":["https://openalex.org/I19880235"]},{"id":"https://openalex.org/I4210121062","display_name":"Research Institute for System Studies","ror":"https://ror.org/02smvmz76","country_code":"RU","type":"facility","lineage":["https://openalex.org/I4210121062"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"ANDREI V. ALEXEEVSKI","raw_affiliation_strings":["A.N. Belozersky Institute of Physical-Chemical Biology, Moscow State University, Moscow, Russia","Scientific Research Institute for System Studies, (NIISI RAN), Moscow, Russia"],"affiliations":[{"raw_affiliation_string":"A.N. Belozersky Institute of Physical-Chemical Biology, Moscow State University, Moscow, Russia","institution_ids":["https://openalex.org/I19880235"]},{"raw_affiliation_string":"Scientific Research Institute for System Studies, (NIISI RAN), Moscow, Russia","institution_ids":["https://openalex.org/I4210121062"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5074005874","display_name":"Yuri V. Panchin","orcid":"https://orcid.org/0000-0002-8006-2839"},"institutions":[{"id":"https://openalex.org/I4210107660","display_name":"Institute for Information Transmission Problems","ror":"https://ror.org/013w2d378","country_code":"RU","type":"facility","lineage":["https://openalex.org/I4210107660"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"YURI V. PANCHIN","raw_affiliation_strings":["Institute for Information Transmission Problems, Russian Academy of Sciences, Moscow, Russia"],"affiliations":[{"raw_affiliation_string":"Institute for Information Transmission Problems, Russian Academy of Sciences, Moscow, Russia","institution_ids":["https://openalex.org/I4210107660"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5083946667"],"corresponding_institution_ids":["https://openalex.org/I19880235"],"apc_list":null,"apc_paid":null,"fwci":0.5422,"has_fulltext":false,"cited_by_count":6,"citation_normalized_percentile":{"value":0.67369334,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"08","issue":"03","first_page":"519","last_page":"534"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9976999759674072,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.6675194501876831},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5430788993835449},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5341680645942688},{"id":"https://openalex.org/keywords/evolutionary-biology","display_name":"Evolutionary biology","score":0.4549446105957031},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.4244213104248047},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.16700032353401184}],"concepts":[{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.6675194501876831},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5430788993835449},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5341680645942688},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.4549446105957031},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.4244213104248047},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.16700032353401184}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1142/s0219720010004719","is_oa":false,"landing_page_url":"https://doi.org/10.1142/s0219720010004719","pdf_url":null,"source":{"id":"https://openalex.org/S155349577","display_name":"Journal of Bioinformatics and Computational Biology","issn_l":"0219-7200","issn":["0219-7200","1757-6334"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311754","host_organization_name":"Imperial College Press","host_organization_lineage":["https://openalex.org/P4310311754"],"host_organization_lineage_names":["Imperial College Press"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Bioinformatics and Computational Biology","raw_type":"journal-article"},{"id":"pmid:20556860","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/20556860","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of bioinformatics and computational biology","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":22,"referenced_works":["https://openalex.org/W1512397531","https://openalex.org/W1975396576","https://openalex.org/W1976608804","https://openalex.org/W1977077898","https://openalex.org/W1981383465","https://openalex.org/W1985917880","https://openalex.org/W1995422978","https://openalex.org/W2009095852","https://openalex.org/W2025021474","https://openalex.org/W2027882785","https://openalex.org/W2038399775","https://openalex.org/W2039279930","https://openalex.org/W2042249753","https://openalex.org/W2060683701","https://openalex.org/W2062463667","https://openalex.org/W2076729646","https://openalex.org/W2084748297","https://openalex.org/W2096139566","https://openalex.org/W2110342329","https://openalex.org/W2137505881","https://openalex.org/W2141524685","https://openalex.org/W2163793049"],"related_works":["https://openalex.org/W2082860237","https://openalex.org/W2119695867","https://openalex.org/W2130076355","https://openalex.org/W1990804418","https://openalex.org/W1993764875","https://openalex.org/W2046158694","https://openalex.org/W2788277189","https://openalex.org/W2013243191","https://openalex.org/W2151865869","https://openalex.org/W2061542922"],"abstract_inverted_index":{"We":[0,27,90],"studied":[1],"the":[2,46],"distribution":[3],"of":[4,68,72],"1-7":[5],"bp":[6],"words":[7,62,74],"in":[8,87],"a":[9,65],"dataset":[10],"that":[11],"includes":[12],"139":[13],"complete":[14],"eukaryotic":[15,19],"genomes,":[16],"33":[17],"masked":[18],"genomes":[20],"and":[21,35,60,102],"coding":[22],"regions":[23],"from":[24],"35":[25],"genomes.":[26],"tested":[28],"different":[29],"statistical":[30],"models":[31],"to":[32,51],"determine":[33],"over-":[34,59],"under-represented":[36,61],"words.":[37],"The":[38],"method":[39,56],"described":[40,79],"by":[41],"Karlin":[42],"et":[43],"al.":[44],"has":[45],"strongest":[47],"predictive":[48],"power":[49],"compared":[50],"other":[52],"methods.":[53],"Using":[54],"this":[55],"we":[57],"identified":[58],"consistent":[63],"within":[64],"large":[66],"array":[67],"taxonomic":[69],"groups.":[70],"Some":[71],"those":[73],"have":[75],"not":[76],"yet":[77],"been":[78],"as":[80,100],"exclusive.":[81],"For":[82],"example,":[83],"CGCG":[84],"is":[85],"over-represented":[86],"CG-deficient":[88],"organisms.":[89],"also":[91],"describe":[92],"exceptions":[93],"for":[94],"widely":[95],"known":[96],"exclusive":[97],"words,":[98],"such":[99],"CG":[101],"TA.":[103]},"counts_by_year":[{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2013,"cited_by_count":1}],"updated_date":"2026-04-21T08:09:41.155169","created_date":"2025-10-10T00:00:00"}
