{"id":"https://openalex.org/W2140335493","doi":"https://doi.org/10.1142/s0219720006001710","title":"UNIQUE PEPTIDE IDENTIFICATION OF RNaseA SUPERFAMILY SEQUENCES BASED ON REINFORCED MERGING ALGORITHMS","display_name":"UNIQUE PEPTIDE IDENTIFICATION OF RNaseA SUPERFAMILY SEQUENCES BASED ON REINFORCED MERGING ALGORITHMS","publication_year":2006,"publication_date":"2006-02-01","ids":{"openalex":"https://openalex.org/W2140335493","doi":"https://doi.org/10.1142/s0219720006001710","mag":"2140335493","pmid":"https://pubmed.ncbi.nlm.nih.gov/16568543"},"language":"en","primary_location":{"id":"doi:10.1142/s0219720006001710","is_oa":false,"landing_page_url":"https://doi.org/10.1142/s0219720006001710","pdf_url":null,"source":{"id":"https://openalex.org/S155349577","display_name":"Journal of Bioinformatics and Computational Biology","issn_l":"0219-7200","issn":["0219-7200","1757-6334"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311754","host_organization_name":"Imperial College Press","host_organization_lineage":["https://openalex.org/P4310311754"],"host_organization_lineage_names":["Imperial College Press"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Bioinformatics and Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5086428506","display_name":"Tun\u2010Wen Pai","orcid":"https://orcid.org/0000-0002-2869-4169"},"institutions":[{"id":"https://openalex.org/I153512688","display_name":"National Taiwan Ocean University","ror":"https://ror.org/03bvvnt49","country_code":"TW","type":"education","lineage":["https://openalex.org/I153512688"]}],"countries":["TW"],"is_corresponding":true,"raw_author_name":"TUN-WEN PAI","raw_affiliation_strings":["Department of Computer Science, National Taiwan Ocean University, No. 2, Pei-Ning Road, Keelung, Taiwan 20224, ROC"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, National Taiwan Ocean University, No. 2, Pei-Ning Road, Keelung, Taiwan 20224, ROC","institution_ids":["https://openalex.org/I153512688"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100801411","display_name":"Bo-Han Su","orcid":null},"institutions":[{"id":"https://openalex.org/I153512688","display_name":"National Taiwan Ocean University","ror":"https://ror.org/03bvvnt49","country_code":"TW","type":"education","lineage":["https://openalex.org/I153512688"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"BO-HAN SU","raw_affiliation_strings":["Department of Computer Science, National Taiwan Ocean University, No. 2, Pei-Ning Road, Keelung, Taiwan 20224, ROC"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, National Taiwan Ocean University, No. 2, Pei-Ning Road, Keelung, Taiwan 20224, ROC","institution_ids":["https://openalex.org/I153512688"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100892536","display_name":"PEI-CHIH WU","orcid":null},"institutions":[{"id":"https://openalex.org/I153512688","display_name":"National Taiwan Ocean University","ror":"https://ror.org/03bvvnt49","country_code":"TW","type":"education","lineage":["https://openalex.org/I153512688"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"PEI-CHIH WU","raw_affiliation_strings":["Department of Computer Science, National Taiwan Ocean University, No. 2, Pei-Ning Road, Keelung, Taiwan 20224, ROC"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, National Taiwan Ocean University, No. 2, Pei-Ning Road, Keelung, Taiwan 20224, ROC","institution_ids":["https://openalex.org/I153512688"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112385017","display_name":"Margaret Dah\u2010Tsyr Chang","orcid":null},"institutions":[{"id":"https://openalex.org/I25846049","display_name":"National Tsing Hua University","ror":"https://ror.org/00zdnkx70","country_code":"TW","type":"education","lineage":["https://openalex.org/I25846049"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"MARGARET DAH-TSYR CHANG","raw_affiliation_strings":["Institute of Molecular and Cellular Biology &amp; Department of Life Science, National Tsing Hua University, No. 101, Sec. 2, Kuang Fu Road, Hsinchu, Taiwan 30013, ROC"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Molecular and Cellular Biology &amp; Department of Life Science, National Tsing Hua University, No. 101, Sec. 2, Kuang Fu Road, Hsinchu, Taiwan 30013, ROC","institution_ids":["https://openalex.org/I25846049"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101898166","display_name":"Hao\u2010Teng Chang","orcid":"https://orcid.org/0000-0001-8756-5220"},"institutions":[{"id":"https://openalex.org/I25846049","display_name":"National Tsing Hua University","ror":"https://ror.org/00zdnkx70","country_code":"TW","type":"education","lineage":["https://openalex.org/I25846049"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"HAO-TENG CHANG","raw_affiliation_strings":["Institute of Molecular and Cellular Biology &amp; Department of Life Science, National Tsing Hua University, No. 101, Sec. 2, Kuang Fu Road, Hsinchu, Taiwan 30013, ROC"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Molecular and Cellular Biology &amp; Department of Life Science, National Tsing Hua University, No. 101, Sec. 2, Kuang Fu Road, Hsinchu, Taiwan 30013, ROC","institution_ids":["https://openalex.org/I25846049"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109080857","display_name":"Tan-chi Fan","orcid":null},"institutions":[{"id":"https://openalex.org/I25846049","display_name":"National Tsing Hua University","ror":"https://ror.org/00zdnkx70","country_code":"TW","type":"education","lineage":["https://openalex.org/I25846049"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"TAN-CHI FAN","raw_affiliation_strings":["Institute of Molecular and Cellular Biology &amp; Department of Life Science, National Tsing Hua University, No. 101, Sec. 2, Kuang Fu Road, Hsinchu, Taiwan 30013, ROC"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Molecular and Cellular Biology &amp; Department of Life Science, National Tsing Hua University, No. 101, Sec. 2, Kuang Fu Road, Hsinchu, Taiwan 30013, ROC","institution_ids":["https://openalex.org/I25846049"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5024481554","display_name":"Shi-Hwei Liu","orcid":null},"institutions":[{"id":"https://openalex.org/I25846049","display_name":"National Tsing Hua University","ror":"https://ror.org/00zdnkx70","country_code":"TW","type":"education","lineage":["https://openalex.org/I25846049"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"SHI-HWEI LIU","raw_affiliation_strings":["Institute of Molecular and Cellular Biology &amp; Department of Life Science, National Tsing Hua University, No. 101, Sec. 2, Kuang Fu Road, Hsinchu, Taiwan 30013, ROC"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Molecular and Cellular Biology &amp; Department of Life Science, National Tsing Hua University, No. 101, Sec. 2, Kuang Fu Road, Hsinchu, Taiwan 30013, ROC","institution_ids":["https://openalex.org/I25846049"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5086428506"],"corresponding_institution_ids":["https://openalex.org/I153512688"],"apc_list":null,"apc_paid":null,"fwci":0.1363,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.53574385,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"04","issue":"01","first_page":"75","last_page":"92"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13326","display_name":"Biochemical and Structural Characterization","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T13326","display_name":"Biochemical and Structural Characterization","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.998199999332428,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10602","display_name":"Glycosylation and Glycoproteins Research","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/epitope","display_name":"Epitope","score":0.7811211347579956},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.7013534307479858},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5653558969497681},{"id":"https://openalex.org/keywords/peptide","display_name":"Peptide","score":0.5361366868019104},{"id":"https://openalex.org/keywords/ribonuclease","display_name":"Ribonuclease","score":0.521510660648346},{"id":"https://openalex.org/keywords/rnase-p","display_name":"RNase P","score":0.5166283249855042},{"id":"https://openalex.org/keywords/structural-motif","display_name":"Structural motif","score":0.4979712963104248},{"id":"https://openalex.org/keywords/protein-superfamily","display_name":"Protein superfamily","score":0.4857504963874817},{"id":"https://openalex.org/keywords/peptide-sequence","display_name":"Peptide sequence","score":0.45568278431892395},{"id":"https://openalex.org/keywords/sequence-alignment","display_name":"Sequence alignment","score":0.4514332413673401},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.40970852971076965},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.2174668312072754},{"id":"https://openalex.org/keywords/antigen","display_name":"Antigen","score":0.21456748247146606},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.1984100639820099},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.11906471848487854}],"concepts":[{"id":"https://openalex.org/C195616568","wikidata":"https://www.wikidata.org/wiki/Q128711","display_name":"Epitope","level":3,"score":0.7811211347579956},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7013534307479858},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5653558969497681},{"id":"https://openalex.org/C2779281246","wikidata":"https://www.wikidata.org/wiki/Q172847","display_name":"Peptide","level":2,"score":0.5361366868019104},{"id":"https://openalex.org/C2778976237","wikidata":"https://www.wikidata.org/wiki/Q422523","display_name":"Ribonuclease","level":4,"score":0.521510660648346},{"id":"https://openalex.org/C10879258","wikidata":"https://www.wikidata.org/wiki/Q76826611","display_name":"RNase P","level":4,"score":0.5166283249855042},{"id":"https://openalex.org/C132677234","wikidata":"https://www.wikidata.org/wiki/Q3273544","display_name":"Structural motif","level":2,"score":0.4979712963104248},{"id":"https://openalex.org/C178180057","wikidata":"https://www.wikidata.org/wiki/Q7251477","display_name":"Protein superfamily","level":3,"score":0.4857504963874817},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.45568278431892395},{"id":"https://openalex.org/C45484198","wikidata":"https://www.wikidata.org/wiki/Q827246","display_name":"Sequence alignment","level":4,"score":0.4514332413673401},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.40970852971076965},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.2174668312072754},{"id":"https://openalex.org/C147483822","wikidata":"https://www.wikidata.org/wiki/Q103537","display_name":"Antigen","level":2,"score":0.21456748247146606},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.1984100639820099},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.11906471848487854}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000911","descriptor_name":"Antibodies, Monoclonal","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000911","descriptor_name":"Antibodies, Monoclonal","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000911","descriptor_name":"Antibodies, Monoclonal","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000918","descriptor_name":"Antibody Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000918","descriptor_name":"Antibody Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000918","descriptor_name":"Antibody Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002417","descriptor_name":"Cattle","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002417","descriptor_name":"Cattle","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002417","descriptor_name":"Cattle","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012259","descriptor_name":"Ribonuclease, Pancreatic","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012259","descriptor_name":"Ribonuclease, Pancreatic","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012259","descriptor_name":"Ribonuclease, Pancreatic","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012259","descriptor_name":"Ribonuclease, Pancreatic","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D012259","descriptor_name":"Ribonuclease, Pancreatic","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D012259","descriptor_name":"Ribonuclease, Pancreatic","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D012259","descriptor_name":"Ribonuclease, Pancreatic","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012259","descriptor_name":"Ribonuclease, Pancreatic","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012259","descriptor_name":"Ribonuclease, Pancreatic","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D018604","descriptor_name":"Epitope Mapping","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D018604","descriptor_name":"Epitope Mapping","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D018604","descriptor_name":"Epitope Mapping","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D020816","descriptor_name":"Amino Acid Motifs","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020816","descriptor_name":"Amino Acid Motifs","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020816","descriptor_name":"Amino Acid Motifs","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1142/s0219720006001710","is_oa":false,"landing_page_url":"https://doi.org/10.1142/s0219720006001710","pdf_url":null,"source":{"id":"https://openalex.org/S155349577","display_name":"Journal of Bioinformatics and Computational Biology","issn_l":"0219-7200","issn":["0219-7200","1757-6334"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311754","host_organization_name":"Imperial College Press","host_organization_lineage":["https://openalex.org/P4310311754"],"host_organization_lineage_names":["Imperial College Press"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Bioinformatics and Computational Biology","raw_type":"journal-article"},{"id":"pmid:16568543","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/16568543","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of bioinformatics and computational biology","raw_type":null},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.109.4066","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.109.4066","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://spider.cs.ntou.edu.tw/biotools/REMUS_ref.pdf","raw_type":"text"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.4699999988079071,"id":"https://metadata.un.org/sdg/15","display_name":"Life in Land"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320323092","display_name":"National Tsing Hua University","ror":"https://ror.org/00zdnkx70"},{"id":"https://openalex.org/F4320323440","display_name":"University System of Taiwan","ror":"https://ror.org/054kvr030"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":31,"referenced_works":["https://openalex.org/W288292677","https://openalex.org/W302982228","https://openalex.org/W1518982663","https://openalex.org/W1549641435","https://openalex.org/W1558693276","https://openalex.org/W1564374751","https://openalex.org/W1594700207","https://openalex.org/W1944812284","https://openalex.org/W1969057879","https://openalex.org/W1985760638","https://openalex.org/W2004788054","https://openalex.org/W2041553413","https://openalex.org/W2046878543","https://openalex.org/W2048931419","https://openalex.org/W2060310210","https://openalex.org/W2068997255","https://openalex.org/W2078504167","https://openalex.org/W2079195332","https://openalex.org/W2081509453","https://openalex.org/W2098129242","https://openalex.org/W2104253471","https://openalex.org/W2112798628","https://openalex.org/W2130710443","https://openalex.org/W2134826720","https://openalex.org/W2141934994","https://openalex.org/W2143210482","https://openalex.org/W2313518572","https://openalex.org/W2430710899","https://openalex.org/W4206302388","https://openalex.org/W4237276437","https://openalex.org/W4245400433"],"related_works":["https://openalex.org/W2015221912","https://openalex.org/W2061976424","https://openalex.org/W2983449871","https://openalex.org/W2087384049","https://openalex.org/W2098996829","https://openalex.org/W2094657119","https://openalex.org/W2465114794","https://openalex.org/W1983545735","https://openalex.org/W2086928290","https://openalex.org/W2055993623"],"abstract_inverted_index":{"Human":[0],"ribonuclease":[1],"A":[2],"(RNaseA)":[3],"superfamily":[4],"consists":[5],"of":[6,23,31,38,57,99,119,142],"eight":[7],"RNases":[8,24,101],"with":[9,73],"high":[10],"similarity":[11],"in":[12,26,66,102],"which":[13],"RNase2":[14],"and":[15,29,117,155,162],"RNase3":[16,67],"share":[17],"76.7%":[18],"identity.":[19],"The":[20,150],"evolutionary":[21],"variation":[22],"results":[25],"differential":[27],"structures":[28],"functions":[30],"the":[32,36,50,58,74,107,114,124],"enzymes.":[33],"To":[34],"distinguish":[35],"characteristics":[37],"each":[39,55],"RNase,":[40],"we":[41],"developed":[42],"reinforced":[43],"merging":[44],"algorithms":[45],"(RMA)":[46],"to":[47,87],"rapidly":[48],"identify":[49],"unique":[51,81,108,143],"peptide":[52,82,109,144],"motifs":[53,65,83,110,121,145],"for":[54,90,126,140,146,157],"member":[56],"highly":[59],"conserved":[60],"human":[61],"RNaseA":[62,131],"superfamily.":[63],"Many":[64],"identified":[68],"by":[69,78],"RMA":[70,151],"correlated":[71],"well":[72],"antigenic":[75],"regions":[76],"predicted":[77],"DNAStar.":[79],"Two":[80],"were":[84,111],"experimentally":[85],"confirmed":[86],"contain":[88],"epitopes":[89],"monoclonal":[91],"antibodies":[92],"(mAbs)":[93],"specifically":[94],"against":[95],"RNase3.":[96],"Further":[97],"analysis":[98],"homologous":[100],"different":[103],"species":[104],"revealed":[105],"that":[106],"located":[112],"at":[113,160],"correspondent":[115],"positions,":[116],"one":[118],"these":[120],"indeed":[122],"matched":[123],"epitope":[125],"a":[127,137],"specific":[128],"anti-bovine":[129],"pancreatic":[130],"(bpRNaseA)":[132],"antibody.":[133],"Our":[134],"method":[135],"provides":[136],"useful":[138],"tool":[139],"identification":[141],"further":[147],"experimental":[148],"design.":[149],"system":[152],"is":[153],"available":[154],"free":[156],"academic":[158],"use":[159],"http://bioinfo.life.nthu.edu.tw/rma/":[161],"http://spider.cs.ntou.edu.tw/bioinformatics/RMA.html.":[163]},"counts_by_year":[{"year":2013,"cited_by_count":1}],"updated_date":"2026-05-05T08:41:31.759640","created_date":"2025-10-10T00:00:00"}
