{"id":"https://openalex.org/W2103725900","doi":"https://doi.org/10.1142/s0219720005001119","title":"THREE-DIMENSIONAL DEFINITION OF LEAF MORPHOLOGICAL TRAITS OF <i>ARABIDOPSIS IN SILICO</i> PHENOTYPIC ANALYSIS","display_name":"THREE-DIMENSIONAL DEFINITION OF LEAF MORPHOLOGICAL TRAITS OF <i>ARABIDOPSIS IN SILICO</i> PHENOTYPIC ANALYSIS","publication_year":2005,"publication_date":"2005-04-01","ids":{"openalex":"https://openalex.org/W2103725900","doi":"https://doi.org/10.1142/s0219720005001119","mag":"2103725900","pmid":"https://pubmed.ncbi.nlm.nih.gov/15852512"},"language":"en","primary_location":{"id":"doi:10.1142/s0219720005001119","is_oa":false,"landing_page_url":"https://doi.org/10.1142/s0219720005001119","pdf_url":null,"source":{"id":"https://openalex.org/S155349577","display_name":"Journal of Bioinformatics and Computational Biology","issn_l":"0219-7200","issn":["0219-7200","1757-6334"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311754","host_organization_name":"Imperial College Press","host_organization_lineage":["https://openalex.org/P4310311754"],"host_organization_lineage_names":["Imperial College Press"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Bioinformatics and Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5082257767","display_name":"Eli Kaminuma","orcid":null},"institutions":[{"id":"https://openalex.org/I4210150921","display_name":"RIKEN Center for Integrative Medical Sciences","ror":"https://ror.org/04mb6s476","country_code":"JP","type":"facility","lineage":["https://openalex.org/I4210110652","https://openalex.org/I4210150921"]}],"countries":["JP"],"is_corresponding":true,"raw_author_name":"ELI KAMINUMA","raw_affiliation_strings":["Bioinformatics Group, Genomic Sciences Center, RIKEN, 1-7-22, Suehiro, Tsurumi, Yokohama, 230-0045, Japan"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Group, Genomic Sciences Center, RIKEN, 1-7-22, Suehiro, Tsurumi, Yokohama, 230-0045, Japan","institution_ids":["https://openalex.org/I4210150921"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016397089","display_name":"Naohiko Heida","orcid":null},"institutions":[{"id":"https://openalex.org/I4210150921","display_name":"RIKEN Center for Integrative Medical Sciences","ror":"https://ror.org/04mb6s476","country_code":"JP","type":"facility","lineage":["https://openalex.org/I4210110652","https://openalex.org/I4210150921"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"NAOHIKO HEIDA","raw_affiliation_strings":["Bioinformatics Group, Genomic Sciences Center, RIKEN, 1-7-22, Suehiro, Tsurumi, Yokohama, 230-0045, Japan"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Group, Genomic Sciences Center, RIKEN, 1-7-22, Suehiro, Tsurumi, Yokohama, 230-0045, Japan","institution_ids":["https://openalex.org/I4210150921"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022709135","display_name":"Yuko Tsumoto","orcid":"https://orcid.org/0000-0003-0950-6895"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"YUKO TSUMOTO","raw_affiliation_strings":["Plant Functional Genomics Research Group, Genomic Sciences Center, RIKEN, 1-7-22, Suehiro, Tsurumi, Yokohama, 230-0045, Japan"],"affiliations":[{"raw_affiliation_string":"Plant Functional Genomics Research Group, Genomic Sciences Center, RIKEN, 1-7-22, Suehiro, Tsurumi, Yokohama, 230-0045, Japan","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054041266","display_name":"Miki Nakazawa","orcid":"https://orcid.org/0000-0001-8198-0060"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"MIKI NAKAZAWA","raw_affiliation_strings":["Plant Functional Genomics Research Group, Genomic Sciences Center, RIKEN, 1-7-22, Suehiro, Tsurumi, Yokohama, 230-0045, Japan"],"affiliations":[{"raw_affiliation_string":"Plant Functional Genomics Research Group, Genomic Sciences Center, RIKEN, 1-7-22, Suehiro, Tsurumi, Yokohama, 230-0045, Japan","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112674699","display_name":"Nobuharu Got\u00f4","orcid":null},"institutions":[{"id":"https://openalex.org/I149557720","display_name":"Miyagi University of Education","ror":"https://ror.org/01s7jxc19","country_code":"JP","type":"education","lineage":["https://openalex.org/I149557720"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"NOBUHARU GOTO","raw_affiliation_strings":["Department of Biology, Miyagi College of Education, Aramaki, Aoba-ku, Sendai, 980-0845, Japan"],"affiliations":[{"raw_affiliation_string":"Department of Biology, Miyagi College of Education, Aramaki, Aoba-ku, Sendai, 980-0845, Japan","institution_ids":["https://openalex.org/I149557720"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5080907178","display_name":"Akihiko Konagaya","orcid":"https://orcid.org/0000-0001-6846-7449"},"institutions":[{"id":"https://openalex.org/I4210150921","display_name":"RIKEN Center for Integrative Medical Sciences","ror":"https://ror.org/04mb6s476","country_code":"JP","type":"facility","lineage":["https://openalex.org/I4210110652","https://openalex.org/I4210150921"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"AKIHIKO KONAGAYA","raw_affiliation_strings":["Bioinformatics Group, Genomic Sciences Center, RIKEN, 1-7-22, Suehiro, Tsurumi, Yokohama, 230-0045, Japan"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Group, Genomic Sciences Center, RIKEN, 1-7-22, Suehiro, Tsurumi, Yokohama, 230-0045, Japan","institution_ids":["https://openalex.org/I4210150921"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059614146","display_name":"Minami Matsui","orcid":"https://orcid.org/0000-0001-5162-2668"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"MINAMI MATSUI","raw_affiliation_strings":["Plant Functional Genomics Research Group, Genomic Sciences Center, RIKEN, 1-7-22, Suehiro, Tsurumi, Yokohama, 230-0045, Japan"],"affiliations":[{"raw_affiliation_string":"Plant Functional Genomics Research Group, Genomic Sciences Center, RIKEN, 1-7-22, Suehiro, Tsurumi, Yokohama, 230-0045, Japan","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5071431815","display_name":"Tetsuro Toyoda","orcid":null},"institutions":[{"id":"https://openalex.org/I4210150921","display_name":"RIKEN Center for Integrative Medical Sciences","ror":"https://ror.org/04mb6s476","country_code":"JP","type":"facility","lineage":["https://openalex.org/I4210110652","https://openalex.org/I4210150921"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"TETSURO TOYODA","raw_affiliation_strings":["Bioinformatics Group, Genomic Sciences Center, RIKEN, 1-7-22, Suehiro, Tsurumi, Yokohama, 230-0045, Japan"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Group, Genomic Sciences Center, RIKEN, 1-7-22, Suehiro, Tsurumi, Yokohama, 230-0045, Japan","institution_ids":["https://openalex.org/I4210150921"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5082257767"],"corresponding_institution_ids":["https://openalex.org/I4210150921"],"apc_list":null,"apc_paid":null,"fwci":1.2167,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.84214502,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"03","issue":"02","first_page":"401","last_page":"414"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10184","display_name":"Plant Molecular Biology Research","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10184","display_name":"Plant Molecular Biology Research","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11927","display_name":"Plant Reproductive Biology","score":0.9957000017166138,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11468","display_name":"Genetic Mapping and Diversity in Plants and Animals","score":0.9926999807357788,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/arabidopsis","display_name":"Arabidopsis","score":0.7273926138877869},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.7190801501274109},{"id":"https://openalex.org/keywords/in-silico","display_name":"In silico","score":0.6622021794319153},{"id":"https://openalex.org/keywords/phenotypic-trait","display_name":"Phenotypic trait","score":0.651046633720398},{"id":"https://openalex.org/keywords/phenome","display_name":"Phenome","score":0.6021826863288879},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5921434164047241},{"id":"https://openalex.org/keywords/trait","display_name":"Trait","score":0.5861189365386963},{"id":"https://openalex.org/keywords/quantitative-trait-locus","display_name":"Quantitative trait locus","score":0.5819790959358215},{"id":"https://openalex.org/keywords/phenotype","display_name":"Phenotype","score":0.574598491191864},{"id":"https://openalex.org/keywords/roundness","display_name":"Roundness (object)","score":0.5061189532279968},{"id":"https://openalex.org/keywords/shape-analysis","display_name":"Shape analysis (program analysis)","score":0.4558282494544983},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.41305816173553467},{"id":"https://openalex.org/keywords/evolutionary-biology","display_name":"Evolutionary biology","score":0.3750515282154083},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.3686726689338684},{"id":"https://openalex.org/keywords/mutant","display_name":"Mutant","score":0.33375489711761475},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.21657830476760864},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.09793323278427124},{"id":"https://openalex.org/keywords/ecology","display_name":"Ecology","score":0.08883413672447205}],"concepts":[{"id":"https://openalex.org/C2779491563","wikidata":"https://www.wikidata.org/wiki/Q157892","display_name":"Arabidopsis","level":4,"score":0.7273926138877869},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7190801501274109},{"id":"https://openalex.org/C2775905019","wikidata":"https://www.wikidata.org/wiki/Q192572","display_name":"In silico","level":3,"score":0.6622021794319153},{"id":"https://openalex.org/C130073038","wikidata":"https://www.wikidata.org/wiki/Q1211967","display_name":"Phenotypic trait","level":4,"score":0.651046633720398},{"id":"https://openalex.org/C7952369","wikidata":"https://www.wikidata.org/wiki/Q844116","display_name":"Phenome","level":4,"score":0.6021826863288879},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5921434164047241},{"id":"https://openalex.org/C106934330","wikidata":"https://www.wikidata.org/wiki/Q1971873","display_name":"Trait","level":2,"score":0.5861189365386963},{"id":"https://openalex.org/C81941488","wikidata":"https://www.wikidata.org/wiki/Q853421","display_name":"Quantitative trait locus","level":3,"score":0.5819790959358215},{"id":"https://openalex.org/C127716648","wikidata":"https://www.wikidata.org/wiki/Q104053","display_name":"Phenotype","level":3,"score":0.574598491191864},{"id":"https://openalex.org/C14190554","wikidata":"https://www.wikidata.org/wiki/Q2496761","display_name":"Roundness (object)","level":2,"score":0.5061189532279968},{"id":"https://openalex.org/C112604564","wikidata":"https://www.wikidata.org/wiki/Q7489226","display_name":"Shape analysis (program analysis)","level":3,"score":0.4558282494544983},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.41305816173553467},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.3750515282154083},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.3686726689338684},{"id":"https://openalex.org/C143065580","wikidata":"https://www.wikidata.org/wiki/Q3285695","display_name":"Mutant","level":3,"score":0.33375489711761475},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.21657830476760864},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.09793323278427124},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.08883413672447205},{"id":"https://openalex.org/C97686452","wikidata":"https://www.wikidata.org/wiki/Q7604153","display_name":"Static analysis","level":2,"score":0.0},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007090","descriptor_name":"Image Interpretation, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007090","descriptor_name":"Image Interpretation, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007090","descriptor_name":"Image Interpretation, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D008953","descriptor_name":"Models, Anatomic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008953","descriptor_name":"Models, Anatomic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008953","descriptor_name":"Models, Anatomic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017360","descriptor_name":"Arabidopsis","qualifier_ui":"Q000033","qualifier_name":"anatomy & histology","is_major_topic":false},{"descriptor_ui":"D017360","descriptor_name":"Arabidopsis","qualifier_ui":"Q000033","qualifier_name":"anatomy & histology","is_major_topic":false},{"descriptor_ui":"D017360","descriptor_name":"Arabidopsis","qualifier_ui":"Q000033","qualifier_name":"anatomy & histology","is_major_topic":false},{"descriptor_ui":"D017360","descriptor_name":"Arabidopsis","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D017360","descriptor_name":"Arabidopsis","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D017360","descriptor_name":"Arabidopsis","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D018515","descriptor_name":"Plant Leaves","qualifier_ui":"Q000033","qualifier_name":"anatomy & histology","is_major_topic":false},{"descriptor_ui":"D018515","descriptor_name":"Plant Leaves","qualifier_ui":"Q000033","qualifier_name":"anatomy & histology","is_major_topic":false},{"descriptor_ui":"D018515","descriptor_name":"Plant Leaves","qualifier_ui":"Q000033","qualifier_name":"anatomy & histology","is_major_topic":false},{"descriptor_ui":"D018515","descriptor_name":"Plant Leaves","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D018515","descriptor_name":"Plant Leaves","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D018515","descriptor_name":"Plant Leaves","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D021621","descriptor_name":"Imaging, Three-Dimensional","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D021621","descriptor_name":"Imaging, Three-Dimensional","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D021621","descriptor_name":"Imaging, Three-Dimensional","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1142/s0219720005001119","is_oa":false,"landing_page_url":"https://doi.org/10.1142/s0219720005001119","pdf_url":null,"source":{"id":"https://openalex.org/S155349577","display_name":"Journal of Bioinformatics and Computational Biology","issn_l":"0219-7200","issn":["0219-7200","1757-6334"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311754","host_organization_name":"Imperial College Press","host_organization_lineage":["https://openalex.org/P4310311754"],"host_organization_lineage_names":["Imperial College Press"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Bioinformatics and Computational Biology","raw_type":"journal-article"},{"id":"pmid:15852512","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/15852512","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of bioinformatics and computational biology","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.46000000834465027,"display_name":"Life in Land","id":"https://metadata.un.org/sdg/15"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":16,"referenced_works":["https://openalex.org/W1553171952","https://openalex.org/W1569725056","https://openalex.org/W1898971794","https://openalex.org/W1977167009","https://openalex.org/W1992582054","https://openalex.org/W2028744503","https://openalex.org/W2097804157","https://openalex.org/W2100115174","https://openalex.org/W2107491970","https://openalex.org/W2111958127","https://openalex.org/W2125057659","https://openalex.org/W2134118659","https://openalex.org/W2197147698","https://openalex.org/W2616978637","https://openalex.org/W4212783130","https://openalex.org/W4241639017"],"related_works":["https://openalex.org/W4283268787","https://openalex.org/W1430744977","https://openalex.org/W3318126","https://openalex.org/W4319597856","https://openalex.org/W3197195647","https://openalex.org/W4225296481","https://openalex.org/W2148430796","https://openalex.org/W2204789892","https://openalex.org/W2087457527","https://openalex.org/W4295942219"],"abstract_inverted_index":{"The":[0],"detection":[1],"of":[2,5,11,20,47,69,132,163,179],"phenotypic":[3,180],"alterations":[4],"mutants":[6],"and":[7,57,109,139],"variants":[8,131,147],"is":[9],"one":[10],"the":[12,21,61,85,104,123,143,149,161,164,168],"bottlenecks":[13],"that":[14,50,115,167,186],"hinder":[15],"systematic":[16],"gene":[17,183],"functional":[18,184],"studies":[19,185],"model":[22],"plant":[23,63],"Arabidopsis.":[24],"In":[25,88,119],"an":[26],"earlier":[27],"study,":[28],"we":[29,91,125],"have":[30,78],"addressed":[31],"this":[32,89],"problem":[33],"by":[34,53],"proposing":[35],"a":[36],"novel":[37],"methodology":[38],"for":[39],"phenome":[40],"analysis":[41,46],"based":[42],"on":[43,93],"in":[44,103,148,182],"silico":[45],"polygon":[48],"models":[49],"are":[51,72,100],"acquired":[52],"3-dimensional":[54],"(3D)":[55],"measurement":[56],"which":[58,99],"precisely":[59],"reconstruct":[60],"actual":[62],"shape.":[64],"However,":[65],"3D":[66,112,172],"quantitative":[67,113],"descriptions":[68,77],"morphological":[70,97],"traits":[71],"rare,":[73],"whereas":[74],"conventional":[75,157,192],"2D":[76,158,193],"already":[79],"been":[80],"studied":[81],"but":[82],"may":[83,174],"lack":[84],"necessary":[86],"precision.":[87],"report,":[90],"focus":[92],"six":[94],"major":[95],"leaf":[96],"traits,":[98,124],"commonly":[101],"used":[102],"current":[105],"manual":[106],"mutant":[107],"screens,":[108],"propose":[110],"new":[111,177],"definitions":[114,170],"describe":[116],"these":[117],"traits.":[118],"experiments":[120],"to":[121,136,176],"extract":[122],"found":[126],"significant":[127],"differences":[128],"between":[129,146],"two":[130],"Arabidopsis":[133],"with":[134,171],"respect":[135],"blade":[137,140,150],"roundness":[138,151],"epinasty.":[141],"Remarkably,":[142],"detected":[144],"difference":[145],"trait":[152],"was":[153],"undetectable":[154],"when":[155],"using":[156,191],"descriptions.":[159,194],"Thus,":[160],"result":[162],"experiment":[165],"indicates":[166],"proposed":[169],"description":[173],"lead":[175],"discoveries":[178],"alteration":[181],"would":[187],"not":[188],"be":[189],"possible":[190]},"counts_by_year":[{"year":2017,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2016-06-24T00:00:00"}
