{"id":"https://openalex.org/W2041947651","doi":"https://doi.org/10.1142/s0219720003000253","title":"BTEVAL: A Server for Evaluation of \u03b2-Turn Prediction Methods","display_name":"BTEVAL: A Server for Evaluation of \u03b2-Turn Prediction Methods","publication_year":2003,"publication_date":"2003-10-01","ids":{"openalex":"https://openalex.org/W2041947651","doi":"https://doi.org/10.1142/s0219720003000253","mag":"2041947651","pmid":"https://pubmed.ncbi.nlm.nih.gov/15290767"},"language":"en","primary_location":{"id":"doi:10.1142/s0219720003000253","is_oa":false,"landing_page_url":"https://doi.org/10.1142/s0219720003000253","pdf_url":null,"source":{"id":"https://openalex.org/S155349577","display_name":"Journal of Bioinformatics and Computational Biology","issn_l":"0219-7200","issn":["0219-7200","1757-6334"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311754","host_organization_name":"Imperial College Press","host_organization_lineage":["https://openalex.org/P4310311754"],"host_organization_lineage_names":["Imperial College Press"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Bioinformatics and Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5110198461","display_name":"Harpreet Kaur","orcid":null},"institutions":[{"id":"https://openalex.org/I4210147764","display_name":"Institute of Microbial Technology","ror":"https://ror.org/055rjs771","country_code":"IN","type":"facility","lineage":["https://openalex.org/I2799351866","https://openalex.org/I4210134808","https://openalex.org/I4210147764","https://openalex.org/I66760702"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Harpreet Kaur","raw_affiliation_strings":["Bioinformatics Center,  Institute of Microbial Technology, Sector 39A, Chandigarh, India","Bioinformatics Center, Institute of Microbial Technology, Sector 39A, Chandigarh, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics Center,  Institute of Microbial Technology, Sector 39A, Chandigarh, India","institution_ids":["https://openalex.org/I4210147764"]},{"raw_affiliation_string":"Bioinformatics Center, Institute of Microbial Technology, Sector 39A, Chandigarh, India","institution_ids":["https://openalex.org/I4210147764"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5051938893","display_name":"Gajendra P. S. Raghava","orcid":"https://orcid.org/0000-0002-8902-2876"},"institutions":[{"id":"https://openalex.org/I4210147764","display_name":"Institute of Microbial Technology","ror":"https://ror.org/055rjs771","country_code":"IN","type":"facility","lineage":["https://openalex.org/I2799351866","https://openalex.org/I4210134808","https://openalex.org/I4210147764","https://openalex.org/I66760702"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"G. P. S. Raghava","raw_affiliation_strings":["Bioinformatics Center,  Institute of Microbial Technology, Sector 39A, Chandigarh, India","Bioinformatics Center, Institute of Microbial Technology, Sector 39A, Chandigarh, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics Center,  Institute of Microbial Technology, Sector 39A, Chandigarh, India","institution_ids":["https://openalex.org/I4210147764"]},{"raw_affiliation_string":"Bioinformatics Center, Institute of Microbial Technology, Sector 39A, Chandigarh, India","institution_ids":["https://openalex.org/I4210147764"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I4210147764"],"apc_list":null,"apc_paid":null,"fwci":0.228,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.52822909,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"01","issue":"03","first_page":"495","last_page":"504"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6760938167572021},{"id":"https://openalex.org/keywords/ranking","display_name":"Ranking (information retrieval)","score":0.6441837549209595},{"id":"https://openalex.org/keywords/web-server","display_name":"Web server","score":0.6431772112846375},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.5894551277160645},{"id":"https://openalex.org/keywords/turn","display_name":"Turn (biochemistry)","score":0.5850884318351746},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.5103322863578796},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.4935358762741089},{"id":"https://openalex.org/keywords/data-set","display_name":"Data set","score":0.43051111698150635},{"id":"https://openalex.org/keywords/protein-superfamily","display_name":"Protein superfamily","score":0.41724294424057007},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.40447184443473816},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3244839012622833},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.18268296122550964},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.13986024260520935},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.08095154166221619},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.06994572281837463}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6760938167572021},{"id":"https://openalex.org/C189430467","wikidata":"https://www.wikidata.org/wiki/Q7293293","display_name":"Ranking (information retrieval)","level":2,"score":0.6441837549209595},{"id":"https://openalex.org/C11392498","wikidata":"https://www.wikidata.org/wiki/Q11288","display_name":"Web server","level":3,"score":0.6431772112846375},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.5894551277160645},{"id":"https://openalex.org/C85641259","wikidata":"https://www.wikidata.org/wiki/Q290042","display_name":"Turn (biochemistry)","level":2,"score":0.5850884318351746},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.5103322863578796},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.4935358762741089},{"id":"https://openalex.org/C58489278","wikidata":"https://www.wikidata.org/wiki/Q1172284","display_name":"Data set","level":2,"score":0.43051111698150635},{"id":"https://openalex.org/C178180057","wikidata":"https://www.wikidata.org/wiki/Q7251477","display_name":"Protein superfamily","level":3,"score":0.41724294424057007},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.40447184443473816},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3244839012622833},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.18268296122550964},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.13986024260520935},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.08095154166221619},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.06994572281837463},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017433","descriptor_name":"Protein Structure, Secondary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017433","descriptor_name":"Protein Structure, Secondary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017433","descriptor_name":"Protein Structure, Secondary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1142/s0219720003000253","is_oa":false,"landing_page_url":"https://doi.org/10.1142/s0219720003000253","pdf_url":null,"source":{"id":"https://openalex.org/S155349577","display_name":"Journal of Bioinformatics and Computational Biology","issn_l":"0219-7200","issn":["0219-7200","1757-6334"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311754","host_organization_name":"Imperial College Press","host_organization_lineage":["https://openalex.org/P4310311754"],"host_organization_lineage_names":["Imperial College Press"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Bioinformatics and Computational Biology","raw_type":"journal-article"},{"id":"pmid:15290767","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/15290767","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of bioinformatics and computational biology","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/9","score":0.550000011920929,"display_name":"Industry, innovation and infrastructure"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320320721","display_name":"Council of Scientific and Industrial Research, India","ror":"https://ror.org/021wm7p51"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":25,"referenced_works":["https://openalex.org/W46808545","https://openalex.org/W1506812273","https://openalex.org/W1963550288","https://openalex.org/W1967666634","https://openalex.org/W1984640820","https://openalex.org/W1985818354","https://openalex.org/W2002046623","https://openalex.org/W2008708467","https://openalex.org/W2025822492","https://openalex.org/W2043023293","https://openalex.org/W2054146722","https://openalex.org/W2075820422","https://openalex.org/W2085277871","https://openalex.org/W2090450209","https://openalex.org/W2095450147","https://openalex.org/W2113403117","https://openalex.org/W2125175668","https://openalex.org/W2140096007","https://openalex.org/W2145539071","https://openalex.org/W2149134776","https://openalex.org/W2151687360","https://openalex.org/W2162938578","https://openalex.org/W2164834306","https://openalex.org/W2410558788","https://openalex.org/W4301759531"],"related_works":["https://openalex.org/W943151747","https://openalex.org/W2048981943","https://openalex.org/W2753901553","https://openalex.org/W2804368879","https://openalex.org/W2798522476","https://openalex.org/W4253040403","https://openalex.org/W4231070408","https://openalex.org/W188724773","https://openalex.org/W4248661837","https://openalex.org/W2776264363"],"abstract_inverted_index":{"This":[0],"paper":[1],"describes":[2],"a":[3,31,38,42,71],"web":[4],"server":[5,98,130],"BTEVAL,":[6],"developed":[7,14],"for":[8],"assessing":[9],"the":[10,101,104],"performance":[11,85,102],"of":[12,30,44,48,52,59,74,90,103],"newly":[13],"beta-turn":[15,26,109],"prediction":[16,27,110],"method":[17,32,66,77,105],"and":[18,84,94,120,127],"it's":[19],"ranking":[20],"with":[21,56,106],"respect":[22],"to":[23],"other":[24,107],"existing":[25,108],"methods.":[28],"Evaluation":[29],"can":[33,63],"be":[34],"carried":[35],"out":[36],"on":[37,67],"single":[39],"protein":[40],"or":[41,70],"number":[43],"proteins.":[45,61],"It":[46],"consists":[47],"clean":[49],"data":[50],"set":[51,73],"426":[53],"non-homologous":[54],"proteins":[55],"seven":[57],"subsets":[58],"these":[60],"Users":[62],"evaluate":[64],"their":[65],"any":[68],"subset":[69],"complete":[72],"data.":[75],"The":[76,97,129],"is":[78,86,131],"assessed":[79],"at":[80],"amino":[81],"acid":[82],"level":[83],"evaluated":[87],"in":[88],"terms":[89],"Qtotal,":[91],"Qpredicted,":[92],"Qobserved":[93],"MCC":[95],"measures.":[96],"also":[99],"compares":[100],"methods":[111],"such":[112],"as":[113],"Chou-Fasman":[114],"algorithm,":[115,117],"Thornton's":[116],"GORBTURN,":[118],"1-4":[119],"2-3":[121],"Correlation":[122],"model,":[123],"Sequence":[124],"coupled":[125],"model":[126],"BTPRED.":[128],"accessible":[132],"from":[133],"http://imtech.res.in/raghava/bteval/":[134]},"counts_by_year":[],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2016-06-24T00:00:00"}
