{"id":"https://openalex.org/W2076066161","doi":"https://doi.org/10.1142/s0218843003000711","title":"A SUITE OF DAML+OIL ONTOLOGIES TO DESCRIBE BIOINFORMATICS WEB SERVICES AND DATA","display_name":"A SUITE OF DAML+OIL ONTOLOGIES TO DESCRIBE BIOINFORMATICS WEB SERVICES AND DATA","publication_year":2003,"publication_date":"2003-03-18","ids":{"openalex":"https://openalex.org/W2076066161","doi":"https://doi.org/10.1142/s0218843003000711","mag":"2076066161"},"language":"en","primary_location":{"id":"doi:10.1142/s0218843003000711","is_oa":false,"landing_page_url":"https://doi.org/10.1142/s0218843003000711","pdf_url":null,"source":{"id":"https://openalex.org/S17147961","display_name":"International Journal of Cooperative Information Systems","issn_l":"0218-8430","issn":["0218-8430","1793-6365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319815","host_organization_name":"World Scientific","host_organization_lineage":["https://openalex.org/P4310319815"],"host_organization_lineage_names":["World Scientific"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Cooperative Information Systems","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://pure.manchester.ac.uk/ws/files/215921180/jcoopis.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5070431163","display_name":"Chris Wroe","orcid":"https://orcid.org/0000-0002-6538-8187"},"institutions":[{"id":"https://openalex.org/I28407311","display_name":"University of Manchester","ror":"https://ror.org/027m9bs27","country_code":"GB","type":"education","lineage":["https://openalex.org/I28407311"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"CHRIS WROE","raw_affiliation_strings":["Department of Computer Science, University of Manchester, Oxford Rd, Manchester, M13 9PL, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Manchester, Oxford Rd, Manchester, M13 9PL, UK","institution_ids":["https://openalex.org/I28407311"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049799218","display_name":"Robert Stevens","orcid":"https://orcid.org/0000-0002-6038-9025"},"institutions":[{"id":"https://openalex.org/I28407311","display_name":"University of Manchester","ror":"https://ror.org/027m9bs27","country_code":"GB","type":"education","lineage":["https://openalex.org/I28407311"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"ROBERT STEVENS","raw_affiliation_strings":["Department of Computer Science, University of Manchester, Oxford Rd, Manchester, M13 9PL, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Manchester, Oxford Rd, Manchester, M13 9PL, UK","institution_ids":["https://openalex.org/I28407311"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027899893","display_name":"Carole Goble","orcid":"https://orcid.org/0000-0003-1219-2137"},"institutions":[{"id":"https://openalex.org/I28407311","display_name":"University of Manchester","ror":"https://ror.org/027m9bs27","country_code":"GB","type":"education","lineage":["https://openalex.org/I28407311"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"CAROLE GOBLE","raw_affiliation_strings":["Department of Computer Science, University of Manchester, Oxford Rd, Manchester, M13 9PL, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Manchester, Oxford Rd, Manchester, M13 9PL, UK","institution_ids":["https://openalex.org/I28407311"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083249843","display_name":"Angus Roberts","orcid":"https://orcid.org/0000-0002-4570-9801"},"institutions":[{"id":"https://openalex.org/I28407311","display_name":"University of Manchester","ror":"https://ror.org/027m9bs27","country_code":"GB","type":"education","lineage":["https://openalex.org/I28407311"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"ANGUS ROBERTS","raw_affiliation_strings":["Department of Computer Science, University of Manchester, Oxford Rd, Manchester, M13 9PL, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Manchester, Oxford Rd, Manchester, M13 9PL, UK","institution_ids":["https://openalex.org/I28407311"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5109058437","display_name":"Mark Greenwood","orcid":null},"institutions":[{"id":"https://openalex.org/I28407311","display_name":"University of Manchester","ror":"https://ror.org/027m9bs27","country_code":"GB","type":"education","lineage":["https://openalex.org/I28407311"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"MARK GREENWOOD","raw_affiliation_strings":["Department of Computer Science, University of Manchester, Oxford Rd, Manchester, M13 9PL, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Manchester, Oxford Rd, Manchester, M13 9PL, UK","institution_ids":["https://openalex.org/I28407311"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I28407311"],"apc_list":null,"apc_paid":null,"fwci":12.0865,"has_fulltext":true,"cited_by_count":174,"citation_normalized_percentile":{"value":0.99268968,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"12","issue":"02","first_page":"197","last_page":"224"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9962000250816345,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9962000250816345,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10679","display_name":"Service-Oriented Architecture and Web Services","score":0.9955999851226807,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9950000047683716,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8677036762237549},{"id":"https://openalex.org/keywords/owl-s","display_name":"OWL-S","score":0.7027775049209595},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.6761702299118042},{"id":"https://openalex.org/keywords/description-logic","display_name":"Description logic","score":0.6140299439430237},{"id":"https://openalex.org/keywords/web-service","display_name":"Web service","score":0.6077354550361633},{"id":"https://openalex.org/keywords/web-ontology-language","display_name":"Web Ontology Language","score":0.5764707326889038},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.5638142228126526},{"id":"https://openalex.org/keywords/service","display_name":"Service (business)","score":0.5356234312057495},{"id":"https://openalex.org/keywords/consistency","display_name":"Consistency (knowledge bases)","score":0.5193580389022827},{"id":"https://openalex.org/keywords/ontology-language","display_name":"Ontology language","score":0.5190504193305969},{"id":"https://openalex.org/keywords/semantic-web","display_name":"Semantic Web","score":0.5054769515991211},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.4750407040119171},{"id":"https://openalex.org/keywords/suite","display_name":"Suite","score":0.4712814688682556},{"id":"https://openalex.org/keywords/middleware","display_name":"Middleware (distributed applications)","score":0.46552392840385437},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.38686320185661316},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.3551303744316101},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.3161187171936035},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.19001257419586182},{"id":"https://openalex.org/keywords/web-standards","display_name":"Web standards","score":0.12834247946739197}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8677036762237549},{"id":"https://openalex.org/C50382505","wikidata":"https://www.wikidata.org/wiki/Q2553356","display_name":"OWL-S","level":4,"score":0.7027775049209595},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.6761702299118042},{"id":"https://openalex.org/C102993220","wikidata":"https://www.wikidata.org/wiki/Q387196","display_name":"Description logic","level":2,"score":0.6140299439430237},{"id":"https://openalex.org/C35578498","wikidata":"https://www.wikidata.org/wiki/Q193424","display_name":"Web service","level":2,"score":0.6077354550361633},{"id":"https://openalex.org/C101230327","wikidata":"https://www.wikidata.org/wiki/Q826165","display_name":"Web Ontology Language","level":3,"score":0.5764707326889038},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.5638142228126526},{"id":"https://openalex.org/C2780378061","wikidata":"https://www.wikidata.org/wiki/Q25351891","display_name":"Service (business)","level":2,"score":0.5356234312057495},{"id":"https://openalex.org/C2776436953","wikidata":"https://www.wikidata.org/wiki/Q5163215","display_name":"Consistency (knowledge bases)","level":2,"score":0.5193580389022827},{"id":"https://openalex.org/C61673122","wikidata":"https://www.wikidata.org/wiki/Q7095059","display_name":"Ontology language","level":3,"score":0.5190504193305969},{"id":"https://openalex.org/C2129575","wikidata":"https://www.wikidata.org/wiki/Q54837","display_name":"Semantic Web","level":2,"score":0.5054769515991211},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.4750407040119171},{"id":"https://openalex.org/C79581498","wikidata":"https://www.wikidata.org/wiki/Q1367530","display_name":"Suite","level":2,"score":0.4712814688682556},{"id":"https://openalex.org/C169468491","wikidata":"https://www.wikidata.org/wiki/Q146923","display_name":"Middleware (distributed applications)","level":2,"score":0.46552392840385437},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.38686320185661316},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.3551303744316101},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.3161187171936035},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.19001257419586182},{"id":"https://openalex.org/C182321512","wikidata":"https://www.wikidata.org/wiki/Q1153289","display_name":"Web standards","level":3,"score":0.12834247946739197},{"id":"https://openalex.org/C136264566","wikidata":"https://www.wikidata.org/wiki/Q159810","display_name":"Economy","level":1,"score":0.0},{"id":"https://openalex.org/C166957645","wikidata":"https://www.wikidata.org/wiki/Q23498","display_name":"Archaeology","level":1,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C95457728","wikidata":"https://www.wikidata.org/wiki/Q309","display_name":"History","level":0,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1142/s0218843003000711","is_oa":false,"landing_page_url":"https://doi.org/10.1142/s0218843003000711","pdf_url":null,"source":{"id":"https://openalex.org/S17147961","display_name":"International Journal of Cooperative Information Systems","issn_l":"0218-8430","issn":["0218-8430","1793-6365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319815","host_organization_name":"World Scientific","host_organization_lineage":["https://openalex.org/P4310319815"],"host_organization_lineage_names":["World Scientific"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Cooperative Information Systems","raw_type":"journal-article"},{"id":"pmh:oai:pure.atira.dk:openaire_cris_publications/5e5f16a8-2703-4c10-9af3-e787d915469a","is_oa":true,"landing_page_url":"https://research.manchester.ac.uk/en/publications/5e5f16a8-2703-4c10-9af3-e787d915469a","pdf_url":"https://pure.manchester.ac.uk/ws/files/215921180/jcoopis.pdf","source":{"id":"https://openalex.org/S4306400662","display_name":"Research Explorer (The University of Manchester)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I28407311","host_organization_name":"University of Manchester","host_organization_lineage":["https://openalex.org/I28407311"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Wroe, C, Stevens, R, Goble, C, Roberts, A & Greenwood, M 2003, 'A suite of DAML+OIL ontologies to describe bioinformatics web services and data', International Journal of Cooperative Information Systems, vol. 12, no. 2, pp. 197-224. https://doi.org/10.1142/S0218843003000711","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.137.2576","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.137.2576","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.semanticgrid.org/documents/mygrid_service_ontology_02.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.201.2585","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.201.2585","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.geodise.org/files/Papers/jcoopis2002.pdf","raw_type":"text"}],"best_oa_location":{"id":"pmh:oai:pure.atira.dk:openaire_cris_publications/5e5f16a8-2703-4c10-9af3-e787d915469a","is_oa":true,"landing_page_url":"https://research.manchester.ac.uk/en/publications/5e5f16a8-2703-4c10-9af3-e787d915469a","pdf_url":"https://pure.manchester.ac.uk/ws/files/215921180/jcoopis.pdf","source":{"id":"https://openalex.org/S4306400662","display_name":"Research Explorer (The University of Manchester)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I28407311","host_organization_name":"University of Manchester","host_organization_lineage":["https://openalex.org/I28407311"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Wroe, C, Stevens, R, Goble, C, Roberts, A & Greenwood, M 2003, 'A suite of DAML+OIL ontologies to describe bioinformatics web services and data', International Journal of Cooperative Information Systems, vol. 12, no. 2, pp. 197-224. https://doi.org/10.1142/S0218843003000711","raw_type":"info:eu-repo/semantics/article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/9","display_name":"Industry, innovation and infrastructure","score":0.49000000953674316}],"awards":[{"id":"https://openalex.org/G8655222873","display_name":null,"funder_award_id":"GR/R67743","funder_id":"https://openalex.org/F4320334627","funder_display_name":"Engineering and Physical Sciences Research Council"}],"funders":[{"id":"https://openalex.org/F4320332180","display_name":"Defense Advanced Research Projects Agency","ror":"https://ror.org/02caytj08"},{"id":"https://openalex.org/F4320334627","display_name":"Engineering and Physical Sciences Research Council","ror":"https://ror.org/0439y7842"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2076066161.pdf","grobid_xml":"https://content.openalex.org/works/W2076066161.grobid-xml"},"referenced_works_count":23,"referenced_works":["https://openalex.org/W40788541","https://openalex.org/W97483932","https://openalex.org/W266686749","https://openalex.org/W1492522106","https://openalex.org/W1506611420","https://openalex.org/W1514949230","https://openalex.org/W1561824803","https://openalex.org/W1578007245","https://openalex.org/W1970019308","https://openalex.org/W1983594585","https://openalex.org/W1996423252","https://openalex.org/W2055043387","https://openalex.org/W2094258495","https://openalex.org/W2103017472","https://openalex.org/W2126557644","https://openalex.org/W2141195725","https://openalex.org/W2142590813","https://openalex.org/W2153609988","https://openalex.org/W2156610741","https://openalex.org/W2160375412","https://openalex.org/W2166309559","https://openalex.org/W4254165724","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W3099272318","https://openalex.org/W2374719812","https://openalex.org/W1571531079","https://openalex.org/W100862262","https://openalex.org/W2747747587","https://openalex.org/W129914909","https://openalex.org/W2393349718","https://openalex.org/W2182888269","https://openalex.org/W2885025208","https://openalex.org/W2019476800"],"abstract_inverted_index":{"The":[0,134],"growing":[1],"quantity":[2],"and":[3,11,53,90,105,155,193,207],"distribution":[4],"of":[5,18,46,61,72,183,196],"bioinformatics":[6,178],"resources":[7,24],"means":[8],"that":[9,128],"finding":[10],"utilizing":[12,64],"them":[13],"requires":[14],"a":[15,31,35,50,58,77,80,87,97,118,158,197],"great":[16],"deal":[17],"expert":[19],"knowledge,":[20],"especially":[21],"as":[22],"many":[23],"need":[25],"to":[26,33,40,56,140,150,172,176,201],"be":[27],"tied":[28],"together":[29],"into":[30],"workflow":[32,81],"accomplish":[34],"useful":[36],"goal.":[37],"We":[38,115,167],"want":[39],"formally":[41],"capture":[42],"at":[43],"least":[44],"some":[45],"this":[47],"knowledge":[48],"within":[49,79],"virtual":[51],"workbench":[52],"middleware":[54,162],"framework":[55],"assist":[57],"wider":[59],"range":[60],"biologists":[62],"in":[63,157,174,185],"these":[65],"resources.":[66],"Different":[67],"activities":[68],"require":[69],"different":[70],"representations":[71,101],"knowledge.":[73],"Finding":[74],"or":[75],"substituting":[76],"service":[78,132,143,153,179,200,205],"is":[82,93,113,136],"often":[83],"best":[84,94],"supported":[85],"by":[86,111],"classification.":[88],"Marshalling":[89],"configuring":[91],"services":[92],"accomplished":[95],"using":[96,122],"formal":[98,191],"description.":[99],"Both":[100],"are":[102,147],"highly":[103],"interdependent":[104],"maintaining":[106],"consistency":[107],"between":[108],"the":[109,123,169,181,194],"two":[110],"hand":[112],"difficult.":[114],"report":[116],"on":[117,138,190],"description":[119],"logic":[120],"approach":[121],"web":[124],"ontology":[125,135,199],"language":[126],"DAML+OIL":[127,184,198],"uses":[129],"property":[130],"based":[131,161,189],"descriptions.":[133],"founded":[137],"DAML-S":[139,173],"dynamically":[141],"create":[142],"classifications.":[144],"These":[145],"classifications":[146,188],"then":[148],"used":[149],"support":[151,177,202],"semantic":[152],"matching":[154,206],"discovery":[156],"large":[159],"grid":[160],"project":[163],"[Formula:":[164],"see":[165],"text].":[166],"describe":[168],"extensions":[170],"necessary":[171],"order":[175],"description;":[180],"utility":[182],"creating":[186],"dynamic":[187],"descriptions;":[192],"implementation":[195],"partial":[203],"user-driven":[204],"composition.":[208]},"counts_by_year":[{"year":2021,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2014,"cited_by_count":2},{"year":2013,"cited_by_count":3},{"year":2012,"cited_by_count":3}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
