{"id":"https://openalex.org/W2908857346","doi":"https://doi.org/10.1142/s021812661950227x","title":"Time Efficient Segmented Technique for Dynamic Programming Based Algorithms with FPGA Implementation","display_name":"Time Efficient Segmented Technique for Dynamic Programming Based Algorithms with FPGA Implementation","publication_year":2019,"publication_date":"2019-01-11","ids":{"openalex":"https://openalex.org/W2908857346","doi":"https://doi.org/10.1142/s021812661950227x","mag":"2908857346"},"language":"en","primary_location":{"id":"doi:10.1142/s021812661950227x","is_oa":false,"landing_page_url":"https://doi.org/10.1142/s021812661950227x","pdf_url":null,"source":{"id":"https://openalex.org/S167602672","display_name":"Journal of Circuits Systems and Computers","issn_l":"0218-1266","issn":["0218-1266","1793-6454"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319815","host_organization_name":"World Scientific","host_organization_lineage":["https://openalex.org/P4310319815"],"host_organization_lineage_names":["World Scientific"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Circuits, Systems and Computers","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5009450763","display_name":"Talal Bonny","orcid":"https://orcid.org/0000-0003-1111-0304"},"institutions":[{"id":"https://openalex.org/I29891158","display_name":"University of Sharjah","ror":"https://ror.org/00engpz63","country_code":"AE","type":"education","lineage":["https://openalex.org/I29891158"]}],"countries":["AE"],"is_corresponding":true,"raw_author_name":"Talal Bonny","raw_affiliation_strings":["College of Engineering, University of Sharjah, P.\u00a0O.\u00a0Box 27272, Sharjah, UAE"],"raw_orcid":"https://orcid.org/0000-0003-1111-0304","affiliations":[{"raw_affiliation_string":"College of Engineering, University of Sharjah, P.\u00a0O.\u00a0Box 27272, Sharjah, UAE","institution_ids":["https://openalex.org/I29891158"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055581351","display_name":"Ridhwan Al Debsi","orcid":null},"institutions":[{"id":"https://openalex.org/I29891158","display_name":"University of Sharjah","ror":"https://ror.org/00engpz63","country_code":"AE","type":"education","lineage":["https://openalex.org/I29891158"]}],"countries":["AE"],"is_corresponding":false,"raw_author_name":"Ridhwan Al Debsi","raw_affiliation_strings":["College of Engineering, University of Sharjah, P.\u00a0O.\u00a0Box 27272, Sharjah, UAE"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Engineering, University of Sharjah, P.\u00a0O.\u00a0Box 27272, Sharjah, UAE","institution_ids":["https://openalex.org/I29891158"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5038578892","display_name":"Mohamed Basel Almourad","orcid":"https://orcid.org/0000-0003-2193-1472"},"institutions":[{"id":"https://openalex.org/I91044093","display_name":"Zayed University","ror":"https://ror.org/03snqfa66","country_code":"AE","type":"education","lineage":["https://openalex.org/I91044093"]}],"countries":["AE"],"is_corresponding":false,"raw_author_name":"Mohamed Basel Almourad","raw_affiliation_strings":["Zayed University, College of Technological Innovation, Dubai, UAE"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Zayed University, College of Technological Innovation, Dubai, UAE","institution_ids":["https://openalex.org/I91044093"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5009450763"],"corresponding_institution_ids":["https://openalex.org/I29891158"],"apc_list":null,"apc_paid":null,"fwci":0.8705,"has_fulltext":false,"cited_by_count":9,"citation_normalized_percentile":{"value":0.80157489,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"28","issue":"13","first_page":"1950227","last_page":"1950227"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10743","display_name":"Software Testing and Debugging Techniques","score":0.9865999817848206,"subfield":{"id":"https://openalex.org/subfields/1712","display_name":"Software"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9848999977111816,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/dynamic-programming","display_name":"Dynamic programming","score":0.8699052333831787},{"id":"https://openalex.org/keywords/longest-common-subsequence-problem","display_name":"Longest common subsequence problem","score":0.786668062210083},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7121351957321167},{"id":"https://openalex.org/keywords/computation","display_name":"Computation","score":0.689044713973999},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.6463531255722046},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.544694721698761},{"id":"https://openalex.org/keywords/multiple-sequence-alignment","display_name":"Multiple sequence alignment","score":0.4886634647846222},{"id":"https://openalex.org/keywords/heuristic","display_name":"Heuristic","score":0.47032153606414795},{"id":"https://openalex.org/keywords/subsequence","display_name":"Subsequence","score":0.44823333621025085},{"id":"https://openalex.org/keywords/sequence-alignment","display_name":"Sequence alignment","score":0.22775420546531677},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.19908633828163147},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.09356477856636047}],"concepts":[{"id":"https://openalex.org/C37404715","wikidata":"https://www.wikidata.org/wiki/Q380679","display_name":"Dynamic programming","level":2,"score":0.8699052333831787},{"id":"https://openalex.org/C120098539","wikidata":"https://www.wikidata.org/wiki/Q141001","display_name":"Longest common subsequence problem","level":2,"score":0.786668062210083},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7121351957321167},{"id":"https://openalex.org/C45374587","wikidata":"https://www.wikidata.org/wiki/Q12525525","display_name":"Computation","level":2,"score":0.689044713973999},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.6463531255722046},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.544694721698761},{"id":"https://openalex.org/C88031987","wikidata":"https://www.wikidata.org/wiki/Q1377767","display_name":"Multiple sequence alignment","level":5,"score":0.4886634647846222},{"id":"https://openalex.org/C173801870","wikidata":"https://www.wikidata.org/wiki/Q201413","display_name":"Heuristic","level":2,"score":0.47032153606414795},{"id":"https://openalex.org/C137877099","wikidata":"https://www.wikidata.org/wiki/Q1332977","display_name":"Subsequence","level":3,"score":0.44823333621025085},{"id":"https://openalex.org/C45484198","wikidata":"https://www.wikidata.org/wiki/Q827246","display_name":"Sequence alignment","level":4,"score":0.22775420546531677},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.19908633828163147},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.09356477856636047},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C34388435","wikidata":"https://www.wikidata.org/wiki/Q2267362","display_name":"Bounded function","level":2,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1142/s021812661950227x","is_oa":false,"landing_page_url":"https://doi.org/10.1142/s021812661950227x","pdf_url":null,"source":{"id":"https://openalex.org/S167602672","display_name":"Journal of Circuits Systems and Computers","issn_l":"0218-1266","issn":["0218-1266","1793-6454"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319815","host_organization_name":"World Scientific","host_organization_lineage":["https://openalex.org/P4310319815"],"host_organization_lineage_names":["World Scientific"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Circuits, Systems and Computers","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":19,"referenced_works":["https://openalex.org/W1965178337","https://openalex.org/W1980911913","https://openalex.org/W1986228396","https://openalex.org/W2004875427","https://openalex.org/W2018502786","https://openalex.org/W2048614295","https://openalex.org/W2057795393","https://openalex.org/W2065980739","https://openalex.org/W2091087388","https://openalex.org/W2100540138","https://openalex.org/W2121315494","https://openalex.org/W2127337715","https://openalex.org/W2128793361","https://openalex.org/W2162744351","https://openalex.org/W2335606494","https://openalex.org/W2547317074","https://openalex.org/W2569294649","https://openalex.org/W2572719737","https://openalex.org/W2606528050"],"related_works":["https://openalex.org/W25732909","https://openalex.org/W4323338832","https://openalex.org/W4289596129","https://openalex.org/W3083981518","https://openalex.org/W170643605","https://openalex.org/W1999879627","https://openalex.org/W2088055539","https://openalex.org/W4225868058","https://openalex.org/W2389167168","https://openalex.org/W3094761360"],"abstract_inverted_index":{"Although":[0],"dynamic":[1,44,76,96,116],"programming":[2,45,77,97,117],"(DP)":[3],"is":[4,21,54,185,189],"an":[5,198],"optimization":[6],"approach":[7],"used":[8,124],"to":[9,18,79,94,100,165,169,223,256],"solve":[10,19],"a":[11,50],"complex":[12],"problem":[13],"fast,":[14],"the":[15,29,32,39,43,62,67,75,86,110,122,131,136,149,155,160,170,192,207,224,228,237,247,253,258,264],"time":[16,41,88,162],"required":[17],"it":[20,188,262],"still":[22],"not":[23],"efficient":[24],"and":[25,72,130,187,240,255],"grows":[26],"polynomially":[27],"with":[28,154,175,206],"size":[30],"of":[31,42,65,194,243,249],"input.":[33],"In":[34],"this":[35],"contribution,":[36],"we":[37,108,202,260],"improve":[38,101],"computation":[40,87,103,161],"based":[46,98,118,157,190],"algorithms":[47,158],"by":[48,163],"proposing":[49],"novel":[51],"technique,":[52],"which":[53,134],"called":[55],"\u201cSDP:":[56],"Segmented":[57],"Dynamic":[58],"programming\u201d.":[59],"SDP":[60,90,111,150],"finds":[61,135],"best":[63],"way":[64],"splitting":[66],"compared":[68],"sequences":[69,238],"into":[70],"segments":[71,196],"then":[73],"applies":[74],"algorithm":[78,99],"each":[80],"segment":[81],"individually.":[82],"This":[83,183],"will":[84],"reduce":[85],"dramatically.":[89],"may":[91],"be":[92],"applied":[93],"any":[95],"its":[102],"time.":[104],"As":[105],"case":[106],"studies,":[107],"apply":[109],"technique":[112,151,251],"on":[113,191,252,263],"two":[114,141],"different":[115],"algorithms;":[119],"\u201cNeedleman\u2013Wunsch":[120],"(NW)\u201d,":[121],"widely":[123],"program":[125],"for":[126],"optimal":[127,225],"sequence":[128,211],"alignment,":[129],"LCS":[132],"algorithm,":[133,213],"\u201cLongest":[137],"Common":[138],"Subsequence\u201d":[139],"between":[140],"input":[142,199],"strings.":[143],"The":[144,231],"results":[145,205,219,226,232],"show":[146,216,246],"that":[147,217],"applying":[148],"in":[152,167,180],"conjunction":[153],"DP":[156,172],"improves":[159],"up":[164],"80%":[166],"comparison":[168],"sole":[171],"algorithms,":[173],"but":[174],"small":[176],"or":[177],"ignorable":[178],"degradation":[179,184],"comparing":[181],"results.":[182],"controllable":[186],"number":[193],"split":[195],"as":[197],"parameter.":[200],"However,":[201],"compare":[203],"our":[204,218,250],"well-known":[208],"heuristic":[209],"FASTA":[210],"alignment":[212],"\u201cGGSEARCH\u201d.":[214],"We":[215],"are":[220,233],"much":[221],"closer":[222],"than":[227],"\u201cGGSEARCH\u201d":[229],"algorithm.":[230],"valid":[234],"independent":[235],"from":[236],"length":[239],"their":[241],"level":[242],"similarity.":[244],"To":[245],"functionality":[248],"hardware":[254],"verify":[257],"results,":[259],"implement":[261],"Xilinx":[265],"Zynq-7000":[266],"FPGA.":[267]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":1}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}