{"id":"https://openalex.org/W2547317074","doi":"https://doi.org/10.1142/s0218126617500669","title":"Aligning Multiple Sequences Using an Improved Tabu Search Algorithm","display_name":"Aligning Multiple Sequences Using an Improved Tabu Search Algorithm","publication_year":2016,"publication_date":"2016-11-04","ids":{"openalex":"https://openalex.org/W2547317074","doi":"https://doi.org/10.1142/s0218126617500669","mag":"2547317074"},"language":"en","primary_location":{"id":"doi:10.1142/s0218126617500669","is_oa":false,"landing_page_url":"https://doi.org/10.1142/s0218126617500669","pdf_url":null,"source":{"id":"https://openalex.org/S167602672","display_name":"Journal of Circuits Systems and Computers","issn_l":"0218-1266","issn":["0218-1266","1793-6454"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319815","host_organization_name":"World Scientific","host_organization_lineage":["https://openalex.org/P4310319815"],"host_organization_lineage_names":["World Scientific"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Circuits, Systems and Computers","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5081486069","display_name":"Lamiche Chaabane","orcid":"https://orcid.org/0000-0002-2239-1087"},"institutions":[{"id":"https://openalex.org/I4210145508","display_name":"Universit\u00e9 de M'Sila","ror":"https://ror.org/055rz8d64","country_code":"DZ","type":"education","lineage":["https://openalex.org/I4210145508"]}],"countries":["DZ"],"is_corresponding":true,"raw_author_name":"Lamiche Chaabane","raw_affiliation_strings":["Department of Computer Science, Mohamed Boudiaf University, M'sila, Algeria"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Mohamed Boudiaf University, M'sila, Algeria","institution_ids":["https://openalex.org/I4210145508"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5000194284","display_name":"Abdelouahab Moussaou\u0131","orcid":"https://orcid.org/0000-0003-3669-1264"},"institutions":[{"id":"https://openalex.org/I40193446","display_name":"University Ferhat Abbas of Setif","ror":"https://ror.org/02rzqza52","country_code":"DZ","type":"education","lineage":["https://openalex.org/I40193446"]}],"countries":["DZ"],"is_corresponding":false,"raw_author_name":"Moussaoui Abdelouahab","raw_affiliation_strings":["Department of Computer Science, Setif 1 University, Setif, Algeria"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Setif 1 University, Setif, Algeria","institution_ids":["https://openalex.org/I40193446"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5081486069"],"corresponding_institution_ids":["https://openalex.org/I4210145508"],"apc_list":null,"apc_paid":null,"fwci":0.1667,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.64108188,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"26","issue":"04","first_page":"1750066","last_page":"1750066"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/tabu-search","display_name":"Tabu search","score":0.9163055419921875},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.6101869344711304},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5905635952949524},{"id":"https://openalex.org/keywords/guided-local-search","display_name":"Guided Local Search","score":0.5558628439903259},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.5149660706520081},{"id":"https://openalex.org/keywords/multiple-sequence-alignment","display_name":"Multiple sequence alignment","score":0.4652019441127777},{"id":"https://openalex.org/keywords/evolutionary-algorithm","display_name":"Evolutionary algorithm","score":0.41627585887908936},{"id":"https://openalex.org/keywords/mathematical-optimization","display_name":"Mathematical optimization","score":0.3410443663597107},{"id":"https://openalex.org/keywords/sequence-alignment","display_name":"Sequence alignment","score":0.2883557379245758},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.2540239691734314},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.25219839811325073},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.08359640836715698},{"id":"https://openalex.org/keywords/peptide-sequence","display_name":"Peptide sequence","score":0.061000168323516846}],"concepts":[{"id":"https://openalex.org/C123370116","wikidata":"https://www.wikidata.org/wiki/Q1424540","display_name":"Tabu search","level":2,"score":0.9163055419921875},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.6101869344711304},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5905635952949524},{"id":"https://openalex.org/C90189156","wikidata":"https://www.wikidata.org/wiki/Q5615481","display_name":"Guided Local Search","level":3,"score":0.5558628439903259},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.5149660706520081},{"id":"https://openalex.org/C88031987","wikidata":"https://www.wikidata.org/wiki/Q1377767","display_name":"Multiple sequence alignment","level":5,"score":0.4652019441127777},{"id":"https://openalex.org/C159149176","wikidata":"https://www.wikidata.org/wiki/Q14489129","display_name":"Evolutionary algorithm","level":2,"score":0.41627585887908936},{"id":"https://openalex.org/C126255220","wikidata":"https://www.wikidata.org/wiki/Q141495","display_name":"Mathematical optimization","level":1,"score":0.3410443663597107},{"id":"https://openalex.org/C45484198","wikidata":"https://www.wikidata.org/wiki/Q827246","display_name":"Sequence alignment","level":4,"score":0.2883557379245758},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.2540239691734314},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.25219839811325073},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.08359640836715698},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.061000168323516846},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1142/s0218126617500669","is_oa":false,"landing_page_url":"https://doi.org/10.1142/s0218126617500669","pdf_url":null,"source":{"id":"https://openalex.org/S167602672","display_name":"Journal of Circuits Systems and Computers","issn_l":"0218-1266","issn":["0218-1266","1793-6454"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319815","host_organization_name":"World Scientific","host_organization_lineage":["https://openalex.org/P4310319815"],"host_organization_lineage_names":["World Scientific"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Circuits, Systems and Computers","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":14,"referenced_works":["https://openalex.org/W1589993665","https://openalex.org/W1969153299","https://openalex.org/W1976471311","https://openalex.org/W2002638840","https://openalex.org/W2021998455","https://openalex.org/W2069323107","https://openalex.org/W2074231493","https://openalex.org/W2089040534","https://openalex.org/W2090338586","https://openalex.org/W2102941368","https://openalex.org/W2128613007","https://openalex.org/W2130625618","https://openalex.org/W2148311769","https://openalex.org/W2166486463"],"related_works":["https://openalex.org/W1987877777","https://openalex.org/W2370323645","https://openalex.org/W2168643831","https://openalex.org/W4243772339","https://openalex.org/W2329077287","https://openalex.org/W2139271550","https://openalex.org/W2075514833","https://openalex.org/W192716354","https://openalex.org/W2150158501","https://openalex.org/W1559717033"],"abstract_inverted_index":{"One":[0],"of":[1,78,102,108,122],"the":[2,29,63,106,109],"most":[3],"essential":[4],"operations":[5],"in":[6,73,120],"biological":[7],"sequence":[8,12,46,80],"analysis":[9],"is":[10,17,49,52,60,71],"multiple":[11,79],"alignment":[13,47],"(MSA),":[14],"where":[15],"it":[16],"used":[18],"for":[19,23,27,44,90],"constructing":[20],"evolutionary":[21],"trees":[22],"DNA":[24],"sequences":[25],"and":[26,87,112],"analyzing":[28],"protein":[30],"structures":[31],"to":[32,75,115,125],"help":[33],"design":[34],"new":[35,42],"proteins.":[36],"In":[37],"this":[38],"research":[39],"study,":[40],"a":[41,99],"method":[43],"solving":[45],"problem":[48],"proposed,":[50],"which":[51],"named":[53],"improved":[54],"tabu":[55,65],"search":[56,66],"(ITS).":[57],"This":[58],"algorithm":[59],"based":[61],"on":[62,98],"classical":[64],"(TS)":[67],"optimizing":[68],"technique.":[69],"ITS":[70,93],"implemented":[72],"order":[74],"obtain":[76],"results":[77,97],"alignment.":[81],"Several":[82],"variants":[83],"concerning":[84],"neighborhood":[85],"generation":[86],"intensification/diversification":[88],"strategies":[89],"our":[91],"proposed":[92],"are":[94],"investigated.":[95],"Simulation":[96],"large":[100],"scale":[101],"datasets":[103],"have":[104],"shown":[105],"efficacy":[107],"developed":[110],"approach":[111],"its":[113],"capacity":[114],"achieve":[116],"good":[117],"quality":[118],"solutions":[119],"terms":[121],"scores":[123],"comparing":[124],"those":[126],"given":[127],"by":[128],"other":[129],"existing":[130],"methods.":[131]},"counts_by_year":[{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}