{"id":"https://openalex.org/W1981106338","doi":"https://doi.org/10.1142/s0129626404001842","title":"PROTEUS: a Bioinformatics Problem Solving Environment on Grids","display_name":"PROTEUS: a Bioinformatics Problem Solving Environment on Grids","publication_year":2004,"publication_date":"2004-06-01","ids":{"openalex":"https://openalex.org/W1981106338","doi":"https://doi.org/10.1142/s0129626404001842","mag":"1981106338"},"language":"en","primary_location":{"id":"doi:10.1142/s0129626404001842","is_oa":false,"landing_page_url":"https://doi.org/10.1142/s0129626404001842","pdf_url":null,"source":{"id":"https://openalex.org/S18360026","display_name":"Parallel Processing Letters","issn_l":"0129-6264","issn":["0129-6264","1793-642X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319815","host_organization_name":"World Scientific","host_organization_lineage":["https://openalex.org/P4310319815"],"host_organization_lineage_names":["World Scientific"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Parallel Processing Letters","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5004845138","display_name":"Mario Cannataro","orcid":"https://orcid.org/0000-0003-1502-2387"},"institutions":[{"id":"https://openalex.org/I36443711","display_name":"Magna Graecia University","ror":"https://ror.org/0530bdk91","country_code":"IT","type":"education","lineage":["https://openalex.org/I36443711"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"MARIO CANNATARO","raw_affiliation_strings":["University \"Magna Gr\u00e6cia\" of Catanzaro, Via T. Campanella 115, 88100 Catanzaro, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University \"Magna Gr\u00e6cia\" of Catanzaro, Via T. Campanella 115, 88100 Catanzaro, Italy","institution_ids":["https://openalex.org/I36443711"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077504436","display_name":"Carmela Comito","orcid":"https://orcid.org/0000-0001-9116-4323"},"institutions":[{"id":"https://openalex.org/I45204951","display_name":"University of Calabria","ror":"https://ror.org/02rc97e94","country_code":"IT","type":"education","lineage":["https://openalex.org/I45204951"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"CARMELA COMITO","raw_affiliation_strings":["DEIS Department, University of Calabria, Via P. Bucci 41c, 87036 Rende, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"DEIS Department, University of Calabria, Via P. Bucci 41c, 87036 Rende, Italy","institution_ids":["https://openalex.org/I45204951"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086650967","display_name":"Antonio Congiusta","orcid":null},"institutions":[{"id":"https://openalex.org/I45204951","display_name":"University of Calabria","ror":"https://ror.org/02rc97e94","country_code":"IT","type":"education","lineage":["https://openalex.org/I45204951"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"ANTONIO CONGIUSTA","raw_affiliation_strings":["DEIS Department, University of Calabria, Via P. Bucci 41c, 87036 Rende, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"DEIS Department, University of Calabria, Via P. Bucci 41c, 87036 Rende, Italy","institution_ids":["https://openalex.org/I45204951"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5027369094","display_name":"Pierangelo Veltri","orcid":"https://orcid.org/0000-0003-2494-0294"},"institutions":[{"id":"https://openalex.org/I36443711","display_name":"Magna Graecia University","ror":"https://ror.org/0530bdk91","country_code":"IT","type":"education","lineage":["https://openalex.org/I36443711"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"PIERANGELO VELTRI","raw_affiliation_strings":["University \"Magna Gr\u00e6cia\" of Catanzaro, Via T. Campanella 115, 88100 Catanzaro, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University \"Magna Gr\u00e6cia\" of Catanzaro, Via T. Campanella 115, 88100 Catanzaro, Italy","institution_ids":["https://openalex.org/I36443711"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":5.4562,"has_fulltext":false,"cited_by_count":11,"citation_normalized_percentile":{"value":0.95547365,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"14","issue":"02","first_page":"217","last_page":"237"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T10715","display_name":"Distributed and Parallel Computing Systems","score":0.9957000017166138,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9911999702453613,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.8134127259254456},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7259911894798279},{"id":"https://openalex.org/keywords/grid","display_name":"Grid","score":0.5685287714004517},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.5401834845542908},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.5252242088317871},{"id":"https://openalex.org/keywords/problem-solving-environment","display_name":"Problem solving environment","score":0.5107240676879883},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.5077982544898987},{"id":"https://openalex.org/keywords/proteus","display_name":"Proteus","score":0.49373921751976013},{"id":"https://openalex.org/keywords/grid-computing","display_name":"Grid computing","score":0.4555136561393738},{"id":"https://openalex.org/keywords/bridge","display_name":"Bridge (graph theory)","score":0.42414408922195435},{"id":"https://openalex.org/keywords/distributed-computing","display_name":"Distributed computing","score":0.3906604051589966},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3348332345485687},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.2617143988609314},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.2530980110168457},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.23209726810455322},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.10303241014480591},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.07847139239311218}],"concepts":[{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.8134127259254456},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7259911894798279},{"id":"https://openalex.org/C187691185","wikidata":"https://www.wikidata.org/wiki/Q2020720","display_name":"Grid","level":2,"score":0.5685287714004517},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.5401834845542908},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.5252242088317871},{"id":"https://openalex.org/C2780665868","wikidata":"https://www.wikidata.org/wiki/Q7246952","display_name":"Problem solving environment","level":2,"score":0.5107240676879883},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.5077982544898987},{"id":"https://openalex.org/C2779464495","wikidata":"https://www.wikidata.org/wiki/Q132229","display_name":"Proteus","level":4,"score":0.49373921751976013},{"id":"https://openalex.org/C70429105","wikidata":"https://www.wikidata.org/wiki/Q249999","display_name":"Grid computing","level":3,"score":0.4555136561393738},{"id":"https://openalex.org/C100776233","wikidata":"https://www.wikidata.org/wiki/Q2532492","display_name":"Bridge (graph theory)","level":2,"score":0.42414408922195435},{"id":"https://openalex.org/C120314980","wikidata":"https://www.wikidata.org/wiki/Q180634","display_name":"Distributed computing","level":1,"score":0.3906604051589966},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3348332345485687},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.2617143988609314},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.2530980110168457},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.23209726810455322},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.10303241014480591},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.07847139239311218},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0},{"id":"https://openalex.org/C547475151","wikidata":"https://www.wikidata.org/wiki/Q25419","display_name":"Escherichia coli","level":3,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C105702510","wikidata":"https://www.wikidata.org/wiki/Q514","display_name":"Anatomy","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1142/s0129626404001842","is_oa":false,"landing_page_url":"https://doi.org/10.1142/s0129626404001842","pdf_url":null,"source":{"id":"https://openalex.org/S18360026","display_name":"Parallel Processing Letters","issn_l":"0129-6264","issn":["0129-6264","1793-642X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319815","host_organization_name":"World Scientific","host_organization_lineage":["https://openalex.org/P4310319815"],"host_organization_lineage_names":["World Scientific"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Parallel Processing Letters","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/12","display_name":"Responsible consumption and production","score":0.550000011920929}],"awards":[],"funders":[{"id":"https://openalex.org/F4320320769","display_name":"Indian Council of Agricultural Research","ror":"https://ror.org/04fw54a43"},{"id":"https://openalex.org/F4320322892","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73"},{"id":"https://openalex.org/F4320323641","display_name":"Vedeck\u00e1 Grantov\u00e1 Agent\u00fara M\u0160VVa\u0160 SR a SAV","ror":"https://ror.org/044gwpv05"},{"id":"https://openalex.org/F4320324136","display_name":"Universit\u00e0 della Calabria","ror":"https://ror.org/02rc97e94"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":7,"referenced_works":["https://openalex.org/W125869453","https://openalex.org/W2022911800","https://openalex.org/W2131146415","https://openalex.org/W2137079713","https://openalex.org/W2162621793","https://openalex.org/W2601351862","https://openalex.org/W4213299189"],"related_works":["https://openalex.org/W1482049123","https://openalex.org/W4245364960","https://openalex.org/W2155372257","https://openalex.org/W1583683058","https://openalex.org/W2153048220","https://openalex.org/W3139620053","https://openalex.org/W2079402721","https://openalex.org/W2385207382","https://openalex.org/W1544908136","https://openalex.org/W1509245144"],"abstract_inverted_index":{"Bioinformatics":[0],"can":[1],"be":[2],"considered":[3],"as":[4],"a":[5,33],"bridge":[6],"between":[7],"life":[8],"science":[9],"and":[10,18,41,47,56],"computer":[11],"science,":[12],"where":[13],"high":[14],"performance":[15],"computational":[16],"platforms":[17],"software":[19],"are":[20,60],"required":[21],"to":[22,44],"manage":[23],"complex":[24],"biological":[25],"data.":[26],"In":[27],"this":[28],"paper":[29],"we":[30],"present":[31],"PROTEUS,":[32],"Grid-based":[34],"Problem":[35],"Solving":[36],"Environment":[37],"that":[38],"integrates":[39],"ontology":[40],"workflow":[42],"approaches":[43],"enhance":[45],"composition":[46],"execution":[48],"of":[49],"bioinformatics":[50],"application":[51],"on":[52],"the":[53],"Grid.":[54],"Architecture":[55],"preliminary":[57],"experimental":[58],"results":[59],"reported.":[61]},"counts_by_year":[{"year":2012,"cited_by_count":1}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
