{"id":"https://openalex.org/W2945444034","doi":"https://doi.org/10.1142/s0129065719500163","title":"Descriptor Selection Improvements for Quantitative Structure-Activity Relationships","display_name":"Descriptor Selection Improvements for Quantitative Structure-Activity Relationships","publication_year":2019,"publication_date":"2019-05-12","ids":{"openalex":"https://openalex.org/W2945444034","doi":"https://doi.org/10.1142/s0129065719500163","mag":"2945444034","pmid":"https://pubmed.ncbi.nlm.nih.gov/31390912"},"language":"en","primary_location":{"id":"doi:10.1142/s0129065719500163","is_oa":false,"landing_page_url":"https://doi.org/10.1142/s0129065719500163","pdf_url":null,"source":{"id":"https://openalex.org/S197665576","display_name":"International Journal of Neural Systems","issn_l":"0129-0657","issn":["0129-0657","1793-6462"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319815","host_organization_name":"World Scientific","host_organization_lineage":["https://openalex.org/P4310319815"],"host_organization_lineage_names":["World Scientific"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Neural Systems","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5018295220","display_name":"Liang-Yong Xia","orcid":"https://orcid.org/0000-0003-1015-7127"},"institutions":[{"id":"https://openalex.org/I111950717","display_name":"Macau University of Science and Technology","ror":"https://ror.org/03jqs2n27","country_code":"MO","type":"education","lineage":["https://openalex.org/I111950717","https://openalex.org/I4391767947"]}],"countries":["MO"],"is_corresponding":true,"raw_author_name":"Liang-Yong Xia","raw_affiliation_strings":["Faculty of Information Technology, Macau University of Science and Technology, Macau, P. R. China"],"affiliations":[{"raw_affiliation_string":"Faculty of Information Technology, Macau University of Science and Technology, Macau, P. R. China","institution_ids":["https://openalex.org/I111950717"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101530677","display_name":"Qingyong Wang","orcid":"https://orcid.org/0000-0001-5115-6425"},"institutions":[{"id":"https://openalex.org/I170215575","display_name":"National University of Defense Technology","ror":"https://ror.org/05d2yfz11","country_code":"CN","type":"education","lineage":["https://openalex.org/I170215575"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qing-Yong Wang","raw_affiliation_strings":["Science and Technology on Information Systems Engineering Laboratory, National University of Defense Technology, Changsha, P. R. China"],"affiliations":[{"raw_affiliation_string":"Science and Technology on Information Systems Engineering Laboratory, National University of Defense Technology, Changsha, P. R. China","institution_ids":["https://openalex.org/I170215575"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007077356","display_name":"Zehong Cao","orcid":"https://orcid.org/0000-0003-3656-0328"},"institutions":[{"id":"https://openalex.org/I129801699","display_name":"University of Tasmania","ror":"https://ror.org/01nfmeh72","country_code":"AU","type":"education","lineage":["https://openalex.org/I129801699"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Zehong Cao","raw_affiliation_strings":["Discipline of ICT, School of Technology, Environments and Design, College of Sciences and Engineering, University of Tasmania, TAS, Australia"],"affiliations":[{"raw_affiliation_string":"Discipline of ICT, School of Technology, Environments and Design, College of Sciences and Engineering, University of Tasmania, TAS, Australia","institution_ids":["https://openalex.org/I129801699"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5083841358","display_name":"Yong Liang","orcid":"https://orcid.org/0000-0002-2858-2810"},"institutions":[{"id":"https://openalex.org/I111950717","display_name":"Macau University of Science and Technology","ror":"https://ror.org/03jqs2n27","country_code":"MO","type":"education","lineage":["https://openalex.org/I111950717","https://openalex.org/I4391767947"]}],"countries":["MO"],"is_corresponding":false,"raw_author_name":"Yong Liang","raw_affiliation_strings":["University of Science and Technology, Macau, P. R. China"],"affiliations":[{"raw_affiliation_string":"University of Science and Technology, Macau, P. R. China","institution_ids":["https://openalex.org/I111950717"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5018295220"],"corresponding_institution_ids":["https://openalex.org/I111950717"],"apc_list":null,"apc_paid":null,"fwci":2.3278,"has_fulltext":false,"cited_by_count":15,"citation_normalized_percentile":{"value":0.89509332,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"29","issue":"09","first_page":"1950016","last_page":"1950016"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11948","display_name":"Machine Learning in Materials Science","score":0.988099992275238,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9625999927520752,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/quantitative-structure\u2013activity-relationship","display_name":"Quantitative structure\u2013activity relationship","score":0.8660079836845398},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6646773815155029},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6424431800842285},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.6007875204086304},{"id":"https://openalex.org/keywords/selection","display_name":"Selection (genetic algorithm)","score":0.5897892713546753},{"id":"https://openalex.org/keywords/sensitivity","display_name":"Sensitivity (control systems)","score":0.5645896792411804},{"id":"https://openalex.org/keywords/molecular-descriptor","display_name":"Molecular descriptor","score":0.5404257774353027},{"id":"https://openalex.org/keywords/simple","display_name":"Simple (philosophy)","score":0.5096354484558105},{"id":"https://openalex.org/keywords/logistic-regression","display_name":"Logistic regression","score":0.5085581541061401},{"id":"https://openalex.org/keywords/model-selection","display_name":"Model selection","score":0.449860155582428},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.42918917536735535},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.406949907541275},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.05252310633659363}],"concepts":[{"id":"https://openalex.org/C164126121","wikidata":"https://www.wikidata.org/wiki/Q766383","display_name":"Quantitative structure\u2013activity relationship","level":2,"score":0.8660079836845398},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6646773815155029},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6424431800842285},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.6007875204086304},{"id":"https://openalex.org/C81917197","wikidata":"https://www.wikidata.org/wiki/Q628760","display_name":"Selection (genetic algorithm)","level":2,"score":0.5897892713546753},{"id":"https://openalex.org/C21200559","wikidata":"https://www.wikidata.org/wiki/Q7451068","display_name":"Sensitivity (control systems)","level":2,"score":0.5645896792411804},{"id":"https://openalex.org/C164923092","wikidata":"https://www.wikidata.org/wiki/Q3705921","display_name":"Molecular descriptor","level":3,"score":0.5404257774353027},{"id":"https://openalex.org/C2780586882","wikidata":"https://www.wikidata.org/wiki/Q7520643","display_name":"Simple (philosophy)","level":2,"score":0.5096354484558105},{"id":"https://openalex.org/C151956035","wikidata":"https://www.wikidata.org/wiki/Q1132755","display_name":"Logistic regression","level":2,"score":0.5085581541061401},{"id":"https://openalex.org/C93959086","wikidata":"https://www.wikidata.org/wiki/Q6888345","display_name":"Model selection","level":2,"score":0.449860155582428},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.42918917536735535},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.406949907541275},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.05252310633659363},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C24326235","wikidata":"https://www.wikidata.org/wiki/Q126095","display_name":"Electronic engineering","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D021281","descriptor_name":"Quantitative Structure-Activity Relationship","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D021281","descriptor_name":"Quantitative Structure-Activity Relationship","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D021281","descriptor_name":"Quantitative Structure-Activity Relationship","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1142/s0129065719500163","is_oa":false,"landing_page_url":"https://doi.org/10.1142/s0129065719500163","pdf_url":null,"source":{"id":"https://openalex.org/S197665576","display_name":"International Journal of Neural Systems","issn_l":"0129-0657","issn":["0129-0657","1793-6462"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319815","host_organization_name":"World Scientific","host_organization_lineage":["https://openalex.org/P4310319815"],"host_organization_lineage_names":["World Scientific"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Neural Systems","raw_type":"journal-article"},{"id":"pmid:31390912","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31390912","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International journal of neural systems","raw_type":null},{"id":"pmh:oai:eprints.utas.edu.au:30449","is_oa":false,"landing_page_url":"https://eprints.utas.edu.au/30449/","pdf_url":null,"source":{"id":"https://openalex.org/S4406922975","display_name":"UTAS Research Repository","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":60,"referenced_works":["https://openalex.org/W309913469","https://openalex.org/W1636374184","https://openalex.org/W1965125844","https://openalex.org/W1972266664","https://openalex.org/W2024311320","https://openalex.org/W2041891835","https://openalex.org/W2042013578","https://openalex.org/W2047909810","https://openalex.org/W2060115065","https://openalex.org/W2068360094","https://openalex.org/W2072918376","https://openalex.org/W2074682976","https://openalex.org/W2087309216","https://openalex.org/W2087661061","https://openalex.org/W2097360283","https://openalex.org/W2107861471","https://openalex.org/W2119387367","https://openalex.org/W2122825543","https://openalex.org/W2128873464","https://openalex.org/W2135458935","https://openalex.org/W2141551738","https://openalex.org/W2152734820","https://openalex.org/W2158468574","https://openalex.org/W2190884494","https://openalex.org/W2203010869","https://openalex.org/W2296073425","https://openalex.org/W2316585030","https://openalex.org/W2325310505","https://openalex.org/W2338065876","https://openalex.org/W2345463153","https://openalex.org/W2346848267","https://openalex.org/W2470503807","https://openalex.org/W2564379273","https://openalex.org/W2570641660","https://openalex.org/W2574750030","https://openalex.org/W2586537367","https://openalex.org/W2588523947","https://openalex.org/W2643413515","https://openalex.org/W2729478895","https://openalex.org/W2747308919","https://openalex.org/W2748643398","https://openalex.org/W2750538963","https://openalex.org/W2767522444","https://openalex.org/W2769513147","https://openalex.org/W2776541877","https://openalex.org/W2780572549","https://openalex.org/W2784306541","https://openalex.org/W2790407631","https://openalex.org/W2792897601","https://openalex.org/W2801439730","https://openalex.org/W2802894871","https://openalex.org/W2803401714","https://openalex.org/W2885641166","https://openalex.org/W2887911837","https://openalex.org/W2889494142","https://openalex.org/W2906299659","https://openalex.org/W3098306969","https://openalex.org/W3144619878","https://openalex.org/W4251163770","https://openalex.org/W4294541781"],"related_works":["https://openalex.org/W3117501106","https://openalex.org/W2378671569","https://openalex.org/W4313131822","https://openalex.org/W1991492574","https://openalex.org/W2062426356","https://openalex.org/W2738644531","https://openalex.org/W2963373297","https://openalex.org/W2899385878","https://openalex.org/W843301618","https://openalex.org/W4225856506"],"abstract_inverted_index":{"Molecular":[0],"descriptor":[1,38],"selection":[2,39],"is":[3,68],"an":[4],"essential":[5],"procedure":[6],"to":[7,85,94],"improve":[8],"a":[9,23,36,96],"predictive":[10],"quantitative":[11],"structure-activity":[12],"relationship":[13],"(QSAR)":[14],"model.":[15],"However,":[16],"within":[17],"the":[18,59,71,89,105,130,133],"QSAR":[19,106,116],"model,":[20],"there":[21],"are":[22],"number":[24],"of":[25,74,99],"redundant,":[26],"noisy":[27],"and":[28,61,64,82,88,113,138],"irrelevant":[29],"descriptors.":[30],"In":[31],"this":[32],"study,":[33],"we":[34],"propose":[35],"novel":[37],"framework":[40,123],"using":[41],"self-paced":[42],"learning":[43,72],"(SPL)":[44],"via":[45],"sparse":[46,127],"logistic":[47],"regression":[48],"(LR)":[49],"with":[50],"Logsum":[51,90],"penalty":[52],"(SPL-Logsum),":[53],"which":[54],"can":[55],"simultaneously":[56],"adaptively":[57],"identify":[58],"simple":[60,81],"complex":[62,83],"samples":[63,84],"avoid":[65],"over-fitting.":[66],"SPL":[67],"inspired":[69],"by":[70],"process":[73],"humans":[75],"or":[76],"animals":[77],"gradually":[78],"learned":[79],"from":[80],"train":[86],"models,":[87],"penalized":[91],"LR":[92],"helps":[93],"select":[95],"small":[97],"subset":[98],"significant":[100],"molecular":[101],"descriptors":[102],"for":[103],"improving":[104],"models.":[107],"Experimental":[108],"results":[109],"on":[110],"some":[111],"simulations":[112],"three":[114],"public":[115],"datasets":[117],"show":[118],"that":[119],"our":[120],"proposed":[121],"SPL-Logsum":[122],"outperforms":[124],"other":[125],"existing":[126],"methods":[128],"regarding":[129],"area":[131],"under":[132],"curve,":[134],"sensitivity,":[135],"specificity,":[136],"accuracy,":[137],"<mml:math":[139],"xmlns:mml=\"http://www.w3.org/1998/Math/MathML\"><mml:mi>P</mml:mi></mml:math>-values.":[140]},"counts_by_year":[{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":2}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
