{"id":"https://openalex.org/W3106754931","doi":"https://doi.org/10.1142/9789811232701_0011","title":"Semantic Changepoint Detection for Finding Potentially Novel Research Publications","display_name":"Semantic Changepoint Detection for Finding Potentially Novel Research Publications","publication_year":2020,"publication_date":"2020-11-01","ids":{"openalex":"https://openalex.org/W3106754931","doi":"https://doi.org/10.1142/9789811232701_0011","mag":"3106754931","pmid":"https://pubmed.ncbi.nlm.nih.gov/33691009"},"language":"en","primary_location":{"id":"doi:10.1142/9789811232701_0011","is_oa":true,"landing_page_url":"https://doi.org/10.1142/9789811232701_0011","pdf_url":null,"source":null,"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Biocomputing 2021","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1142/9789811232701_0011","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5023857982","display_name":"Bhavish Dinakar","orcid":"https://orcid.org/0000-0002-7611-101X"},"institutions":[{"id":"https://openalex.org/I95457486","display_name":"University of California, Berkeley","ror":"https://ror.org/01an7q238","country_code":"US","type":"education","lineage":["https://openalex.org/I95457486"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Bhavish Dinakar","raw_affiliation_strings":["Department of Chemical and Biomolecular Engineering, University of California, Berkeley, Berkeley, CA 94720, USA"],"affiliations":[{"raw_affiliation_string":"Department of Chemical and Biomolecular Engineering, University of California, Berkeley, Berkeley, CA 94720, USA","institution_ids":["https://openalex.org/I95457486"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043032665","display_name":"Mayla R. Boguslav","orcid":"https://orcid.org/0000-0003-0439-3107"},"institutions":[{"id":"https://openalex.org/I51713134","display_name":"University of Colorado Anschutz Medical Campus","ror":"https://ror.org/03wmf1y16","country_code":"US","type":"education","lineage":["https://openalex.org/I51713134"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mayla R. Boguslav","raw_affiliation_strings":["Computational Bioscience Program, University of Colorado Anschutz Medical Campus, Aurora, CO 80045, USA"],"affiliations":[{"raw_affiliation_string":"Computational Bioscience Program, University of Colorado Anschutz Medical Campus, Aurora, CO 80045, USA","institution_ids":["https://openalex.org/I51713134"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064020522","display_name":"Carsten G\u00f6rg","orcid":"https://orcid.org/0000-0001-5088-4201"},"institutions":[{"id":"https://openalex.org/I51713134","display_name":"University of Colorado Anschutz Medical Campus","ror":"https://ror.org/03wmf1y16","country_code":"US","type":"education","lineage":["https://openalex.org/I51713134"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Carsten G\u00f6rg","raw_affiliation_strings":["Department of Biostatistics and Informatics, University of Colorado Anschutz Medical Campus, Aurora, CO 80045, USA"],"affiliations":[{"raw_affiliation_string":"Department of Biostatistics and Informatics, University of Colorado Anschutz Medical Campus, Aurora, CO 80045, USA","institution_ids":["https://openalex.org/I51713134"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5018207289","display_name":"Deendayal Dinakarpandian","orcid":null},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Deendayal Dinakarpandian","raw_affiliation_strings":["Center for Biomedical Informatics Research, Stanford University, Stanford, CA 94305, USA"],"affiliations":[{"raw_affiliation_string":"Center for Biomedical Informatics Research, Stanford University, Stanford, CA 94305, USA","institution_ids":["https://openalex.org/I97018004"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5023857982"],"corresponding_institution_ids":["https://openalex.org/I95457486"],"apc_list":null,"apc_paid":null,"fwci":0.6796,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.77530988,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"26","issue":null,"first_page":"107","last_page":"118"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9979000091552734,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9979000091552734,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13083","display_name":"Advanced Text Analysis Techniques","score":0.9957000017166138,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9930999875068665,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7628723978996277},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.4600055515766144},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.45665183663368225},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.37639546394348145}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7628723978996277},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.4600055515766144},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.45665183663368225},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.37639546394348145}],"mesh":[{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1142/9789811232701_0011","is_oa":true,"landing_page_url":"https://doi.org/10.1142/9789811232701_0011","pdf_url":null,"source":null,"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Biocomputing 2021","raw_type":"proceedings-article"},{"id":"pmid:33691009","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33691009","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:8352552","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8352552","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Pac Symp Biocomput","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1142/9789811232701_0011","is_oa":true,"landing_page_url":"https://doi.org/10.1142/9789811232701_0011","pdf_url":null,"source":null,"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Biocomputing 2021","raw_type":"proceedings-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":16,"referenced_works":["https://openalex.org/W1521626219","https://openalex.org/W1880262756","https://openalex.org/W1967042859","https://openalex.org/W2011301426","https://openalex.org/W2025365931","https://openalex.org/W2043976122","https://openalex.org/W2101234009","https://openalex.org/W2126094488","https://openalex.org/W2142561902","https://openalex.org/W2250539671","https://openalex.org/W2768273372","https://openalex.org/W2788179578","https://openalex.org/W2940542551","https://openalex.org/W2944400536","https://openalex.org/W3078096037","https://openalex.org/W3104059174"],"related_works":["https://openalex.org/W2384888906","https://openalex.org/W2144190808","https://openalex.org/W2376314740","https://openalex.org/W2366644548","https://openalex.org/W2357241418","https://openalex.org/W2119214692","https://openalex.org/W2611614995","https://openalex.org/W2368651715","https://openalex.org/W2789919619","https://openalex.org/W3107474891"],"abstract_inverted_index":{"How":[0],"has":[1],"the":[2,15,18,25,35,62,87],"focus":[3],"of":[4,20,27,37,57,67,74,82,92],"research":[5,58],"papers":[6,16,83],"on":[7,50,70,76,86],"a":[8,28,32,41,54,65,71],"given":[9,55],"disease":[10],"changed":[11],"over":[12],"time?":[13],"Identifying":[14],"at":[17],"cusps":[19],"change":[21,33],"can":[22],"help":[23],"highlight":[24],"emergence":[26],"new":[29],"topic":[30],"or":[31],"in":[34],"direction":[36],"research.":[38],"We":[39,60],"present":[40],"generally":[42],"applicable":[43],"unsupervised":[44],"approach":[45,63],"to":[46],"this":[47],"question":[48],"based":[49,69],"semantic":[51],"changepoints":[52],"within":[53],"collection":[56],"papers.":[59],"illustrate":[61],"by":[64],"range":[66],"examples":[68],"nascent":[72],"corpus":[73],"literature":[75],"COVID-19":[77],"as":[78,80],"well":[79],"subsets":[81],"from":[84],"PubMed":[85],"World":[88],"Health":[89],"Organization":[90],"list":[91],"neglected":[93],"tropical":[94],"diseases.":[95],"The":[96],"software":[97],"is":[98],"freely":[99],"available":[100],"at:":[101],"https://github.com/pdddinakar/SemanticChangepointDetection.":[102]},"counts_by_year":[{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":2},{"year":2020,"cited_by_count":1}],"updated_date":"2026-04-21T08:09:41.155169","created_date":"2025-10-10T00:00:00"}
