{"id":"https://openalex.org/W3197619729","doi":"https://doi.org/10.1137/21m1445545","title":"Incorporating Computational Challenges into a Multidisciplinary Course on Stochastic Processes","display_name":"Incorporating Computational Challenges into a Multidisciplinary Course on Stochastic Processes","publication_year":2023,"publication_date":"2023-11-01","ids":{"openalex":"https://openalex.org/W3197619729","doi":"https://doi.org/10.1137/21m1445545","mag":"3197619729"},"language":"en","primary_location":{"id":"doi:10.1137/21m1445545","is_oa":false,"landing_page_url":"https://doi.org/10.1137/21m1445545","pdf_url":null,"source":{"id":"https://openalex.org/S160107561","display_name":"SIAM Review","issn_l":"0036-1445","issn":["0036-1445","1095-7200"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320508","host_organization_name":"Society for Industrial and Applied Mathematics","host_organization_lineage":["https://openalex.org/P4310320508"],"host_organization_lineage_names":["Society for Industrial and Applied Mathematics"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"SIAM Review","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5068696522","display_name":"Mark Jayson Cortez","orcid":"https://orcid.org/0000-0002-5719-1210"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Mark Jayson Cortez","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007492504","display_name":"Alan Eric Akil","orcid":"https://orcid.org/0000-0003-4862-4771"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Alan Eric Akil","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020814624","display_name":"Kre\u0161imir Josi\u0107\u0301","orcid":"https://orcid.org/0000-0002-1975-3913"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Kre\u0161imir Josi\u0107","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0002-1975-3913","affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5055171653","display_name":"Alexander J. Stewart","orcid":"https://orcid.org/0000-0001-5234-3871"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Alexander J. Stewart","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.00065714,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"65","issue":"4","first_page":"1152","last_page":"1170"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9941999912261963,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9941999912261963,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9915000200271606,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11764","display_name":"Evolution and Genetic Dynamics","score":0.9779000282287598,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/popularity","display_name":"Popularity","score":0.6734142303466797},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6274080276489258},{"id":"https://openalex.org/keywords/class","display_name":"Class (philosophy)","score":0.6236347556114197},{"id":"https://openalex.org/keywords/mathematics-education","display_name":"Mathematics education","score":0.6164937615394592},{"id":"https://openalex.org/keywords/multidisciplinary-approach","display_name":"Multidisciplinary approach","score":0.5488964319229126},{"id":"https://openalex.org/keywords/course","display_name":"Course (navigation)","score":0.5033988356590271},{"id":"https://openalex.org/keywords/code","display_name":"Code (set theory)","score":0.48076245188713074},{"id":"https://openalex.org/keywords/management-science","display_name":"Management science","score":0.3443876802921295},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.18407279253005981},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.15933090448379517},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.13801106810569763},{"id":"https://openalex.org/keywords/psychology","display_name":"Psychology","score":0.12792855501174927},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.11774379014968872}],"concepts":[{"id":"https://openalex.org/C2780586970","wikidata":"https://www.wikidata.org/wiki/Q1357284","display_name":"Popularity","level":2,"score":0.6734142303466797},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6274080276489258},{"id":"https://openalex.org/C2777212361","wikidata":"https://www.wikidata.org/wiki/Q5127848","display_name":"Class (philosophy)","level":2,"score":0.6236347556114197},{"id":"https://openalex.org/C145420912","wikidata":"https://www.wikidata.org/wiki/Q853077","display_name":"Mathematics education","level":1,"score":0.6164937615394592},{"id":"https://openalex.org/C22467394","wikidata":"https://www.wikidata.org/wiki/Q849359","display_name":"Multidisciplinary approach","level":2,"score":0.5488964319229126},{"id":"https://openalex.org/C2777552389","wikidata":"https://www.wikidata.org/wiki/Q1962728","display_name":"Course (navigation)","level":2,"score":0.5033988356590271},{"id":"https://openalex.org/C2776760102","wikidata":"https://www.wikidata.org/wiki/Q5139990","display_name":"Code (set theory)","level":3,"score":0.48076245188713074},{"id":"https://openalex.org/C539667460","wikidata":"https://www.wikidata.org/wiki/Q2414942","display_name":"Management science","level":1,"score":0.3443876802921295},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.18407279253005981},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.15933090448379517},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.13801106810569763},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.12792855501174927},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.11774379014968872},{"id":"https://openalex.org/C77805123","wikidata":"https://www.wikidata.org/wiki/Q161272","display_name":"Social psychology","level":1,"score":0.0},{"id":"https://openalex.org/C36289849","wikidata":"https://www.wikidata.org/wiki/Q34749","display_name":"Social science","level":1,"score":0.0},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.0},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0},{"id":"https://openalex.org/C146978453","wikidata":"https://www.wikidata.org/wiki/Q3798668","display_name":"Aerospace engineering","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1137/21m1445545","is_oa":false,"landing_page_url":"https://doi.org/10.1137/21m1445545","pdf_url":null,"source":{"id":"https://openalex.org/S160107561","display_name":"SIAM Review","issn_l":"0036-1445","issn":["0036-1445","1095-7200"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320508","host_organization_name":"Society for Industrial and Applied Mathematics","host_organization_lineage":["https://openalex.org/P4310320508"],"host_organization_lineage_names":["Society for Industrial and Applied Mathematics"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"SIAM Review","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Quality Education","score":0.7200000286102295,"id":"https://metadata.un.org/sdg/4"}],"awards":[{"id":"https://openalex.org/G4311490220","display_name":"Expanding the utility of transcriptional bacterial computing","funder_award_id":"5r01gm117138-04","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G6824888074","display_name":"NeuroNex Theory Team: Inferring interactions between neurons, stimuli, and behavior","funder_award_id":"1707400","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G6904713116","display_name":"Collaborative Research:  MODULUS:  A synthetic biology approach to understanding environment sensing in multicellular systems","funder_award_id":"1936770","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G856280692","display_name":"Collaborative Research: Spatiotemporal Dynamics of Synthetic Microbial Consortia","funder_award_id":"1662305","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":55,"referenced_works":["https://openalex.org/W119769658","https://openalex.org/W599517357","https://openalex.org/W604170243","https://openalex.org/W615651129","https://openalex.org/W1484434821","https://openalex.org/W1484977481","https://openalex.org/W1499965417","https://openalex.org/W1509581155","https://openalex.org/W1512021223","https://openalex.org/W1537236879","https://openalex.org/W1587887730","https://openalex.org/W1598648881","https://openalex.org/W1599969036","https://openalex.org/W1645305843","https://openalex.org/W1738124305","https://openalex.org/W1975318518","https://openalex.org/W1977578104","https://openalex.org/W2012482128","https://openalex.org/W2024123288","https://openalex.org/W2039461050","https://openalex.org/W2061621047","https://openalex.org/W2075644669","https://openalex.org/W2076933987","https://openalex.org/W2077245462","https://openalex.org/W2093470850","https://openalex.org/W2100056270","https://openalex.org/W2101338329","https://openalex.org/W2104482355","https://openalex.org/W2113671972","https://openalex.org/W2115669451","https://openalex.org/W2117405980","https://openalex.org/W2131215403","https://openalex.org/W2131766020","https://openalex.org/W2134759932","https://openalex.org/W2144282840","https://openalex.org/W2145137020","https://openalex.org/W2149242848","https://openalex.org/W2155418451","https://openalex.org/W2160485643","https://openalex.org/W2167073771","https://openalex.org/W2187933120","https://openalex.org/W2205386250","https://openalex.org/W2232943036","https://openalex.org/W2528271650","https://openalex.org/W2610752197","https://openalex.org/W2915236932","https://openalex.org/W2915622878","https://openalex.org/W2937116702","https://openalex.org/W2985499145","https://openalex.org/W3031490426","https://openalex.org/W3104948582","https://openalex.org/W3142588439","https://openalex.org/W4231081240","https://openalex.org/W4239146293","https://openalex.org/W4242285942"],"related_works":["https://openalex.org/W2368605798","https://openalex.org/W2518037665","https://openalex.org/W2348524959","https://openalex.org/W2368049389","https://openalex.org/W2170801710","https://openalex.org/W2384861574","https://openalex.org/W2952704802","https://openalex.org/W4294565801","https://openalex.org/W2142306706","https://openalex.org/W2044536215"],"abstract_inverted_index":{"Quantitative":[0],"methods":[1],"and":[2,43,65,74,81,105,141,145,159,180],"mathematical":[3,39],"modeling":[4,103],"are":[5,19],"playing":[6],"an":[7,28,109,161,167],"increasingly":[8],"important":[9],"role":[10],"across":[11],"disciplines.":[12],"As":[13],"a":[14,55,69,85,118,148,200],"result,":[15],"interdisciplinary":[16],"mathematics":[17,169],"courses":[18,26],"increasing":[20],"in":[21,60,117,138,147,166,188],"popularity.":[22],"However,":[23],"teaching":[24],"such":[25],"at":[27],"advanced":[29],"level":[30],"can":[31],"be":[32],"challenging.":[33],"Students":[34],"often":[35],"arrive":[36],"with":[37,100,108,196],"different":[38,41,127],"backgrounds,":[40],"interests,":[42],"divergent":[44],"reasons":[45],"for":[46,125,199],"wanting":[47],"to":[48,68,78,97,113,123],"learn":[49],"the":[50,92,101,115,126,131,136,182,185,189],"material.":[51],"Here":[52],"we":[53,83],"describe":[54,181],"course":[56,170],"on":[57,111,135],"stochastic":[58],"processes":[59],"biology":[61],"delivered":[62],"between":[63],"September":[64],"December":[66],"2020":[67],"mixed":[70],"audience":[71],"of":[72,87,130,163,184,202],"mathematicians":[73],"biologists.":[75],"In":[76,121],"addition":[77],"traditional":[79],"lectures":[80],"homework,":[82],"incorporated":[84],"series":[86],"weekly":[88],"computational":[89,172],"challenges":[90,95,137,186],"into":[91],"course.":[93,190],"These":[94],"served":[96],"familiarize":[98],"students":[99,179],"main":[102],"concepts":[104,116],"provide":[106,192],"them":[107],"introduction":[110],"how":[112],"implement":[114],"research-like":[119],"setting.":[120],"order":[122],"account":[124],"academic":[128],"backgrounds":[129],"students,":[132],"they":[133],"worked":[134],"small":[139],"groups":[140],"presented":[142,187],"their":[143],"results":[144],"code":[146,198],"dedicated":[149],"discussion":[150],"class":[151],"each":[152],"week.":[153],"We":[154,174,191],"discuss":[155,176],"our":[156],"experience":[157],"designing":[158],"implementing":[160],"element":[162],"problem-based":[164],"learning":[165],"applied":[168],"through":[171],"challenges.":[173,203],"also":[175],"feedback":[177],"from":[178],"content":[183],"all":[193],"materials,":[194],"along":[195],"example":[197],"number":[201]},"counts_by_year":[],"updated_date":"2026-08-06T08:24:18.245995","created_date":"2025-10-10T00:00:00"}
