{"id":"https://openalex.org/W3163866096","doi":"https://doi.org/10.1137/21m1418575","title":"A Method to Coarse-Grain MultiAgent Stochastic Systems with Regions of Multistability","display_name":"A Method to Coarse-Grain MultiAgent Stochastic Systems with Regions of Multistability","publication_year":2022,"publication_date":"2022-03-01","ids":{"openalex":"https://openalex.org/W3163866096","doi":"https://doi.org/10.1137/21m1418575","mag":"3163866096"},"language":"en","primary_location":{"id":"doi:10.1137/21m1418575","is_oa":false,"landing_page_url":"https://doi.org/10.1137/21m1418575","pdf_url":null,"source":{"id":"https://openalex.org/S4357572","display_name":"Multiscale Modeling and Simulation","issn_l":"1540-3459","issn":["1540-3459","1540-3467"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320508","host_organization_name":"Society for Industrial and Applied Mathematics","host_organization_lineage":["https://openalex.org/P4310320508"],"host_organization_lineage_names":["Society for Industrial and Applied Mathematics"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Multiscale Modeling &amp; Simulation","raw_type":"journal-article"},"type":"article","indexed_in":["arxiv","crossref","datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://arxiv.org/pdf/2105.03398","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5021657864","display_name":"Daria Stepanova","orcid":"https://orcid.org/0000-0003-1771-1987"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Daria Stepanova","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0003-1771-1987","affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087448925","display_name":"Helen M. Byrne","orcid":"https://orcid.org/0000-0003-1771-5910"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Helen M. Byrne","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025791169","display_name":"Philip K. Maini","orcid":"https://orcid.org/0000-0002-0146-9164"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Philip K. Maini","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5079611387","display_name":"Tom\u00e1s Alarc\u00f3n","orcid":"https://orcid.org/0000-0002-8566-3676"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Tom\u00e1s Alarc\u00f3n","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.00157401,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"20","issue":"1","first_page":"404","last_page":"432"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11829","display_name":"Mathematical Biology Tumor Growth","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/2611","display_name":"Modeling and Simulation"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9916999936103821,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/multistability","display_name":"Multistability","score":0.6663839817047119},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6477359533309937},{"id":"https://openalex.org/keywords/markov-chain","display_name":"Markov chain","score":0.5710325241088867},{"id":"https://openalex.org/keywords/stability","display_name":"Stability (learning theory)","score":0.5502254962921143},{"id":"https://openalex.org/keywords/granularity","display_name":"Granularity","score":0.5352059006690979},{"id":"https://openalex.org/keywords/statistical-physics","display_name":"Statistical physics","score":0.5318070650100708},{"id":"https://openalex.org/keywords/bistability","display_name":"Bistability","score":0.5286843180656433},{"id":"https://openalex.org/keywords/reduction","display_name":"Reduction (mathematics)","score":0.4679865837097168},{"id":"https://openalex.org/keywords/state-space","display_name":"State space","score":0.4516151249408722},{"id":"https://openalex.org/keywords/stochastic-modelling","display_name":"Stochastic modelling","score":0.4477529227733612},{"id":"https://openalex.org/keywords/complex-system","display_name":"Complex system","score":0.43484047055244446},{"id":"https://openalex.org/keywords/hybrid-system","display_name":"Hybrid system","score":0.41253942251205444},{"id":"https://openalex.org/keywords/computational-model","display_name":"Computational model","score":0.41142839193344116},{"id":"https://openalex.org/keywords/biological-system","display_name":"Biological system","score":0.4081447720527649},{"id":"https://openalex.org/keywords/mathematical-optimization","display_name":"Mathematical optimization","score":0.36792585253715515},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.352234423160553},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.2567879855632782},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.16610026359558105},{"id":"https://openalex.org/keywords/nonlinear-system","display_name":"Nonlinear system","score":0.15202656388282776},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.14716404676437378},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.11020508408546448}],"concepts":[{"id":"https://openalex.org/C2776966350","wikidata":"https://www.wikidata.org/wiki/Q6935096","display_name":"Multistability","level":3,"score":0.6663839817047119},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6477359533309937},{"id":"https://openalex.org/C98763669","wikidata":"https://www.wikidata.org/wiki/Q176645","display_name":"Markov chain","level":2,"score":0.5710325241088867},{"id":"https://openalex.org/C112972136","wikidata":"https://www.wikidata.org/wiki/Q7595718","display_name":"Stability (learning theory)","level":2,"score":0.5502254962921143},{"id":"https://openalex.org/C177774035","wikidata":"https://www.wikidata.org/wiki/Q1246948","display_name":"Granularity","level":2,"score":0.5352059006690979},{"id":"https://openalex.org/C121864883","wikidata":"https://www.wikidata.org/wiki/Q677916","display_name":"Statistical physics","level":1,"score":0.5318070650100708},{"id":"https://openalex.org/C97292510","wikidata":"https://www.wikidata.org/wiki/Q2304620","display_name":"Bistability","level":2,"score":0.5286843180656433},{"id":"https://openalex.org/C111335779","wikidata":"https://www.wikidata.org/wiki/Q3454686","display_name":"Reduction (mathematics)","level":2,"score":0.4679865837097168},{"id":"https://openalex.org/C72434380","wikidata":"https://www.wikidata.org/wiki/Q230930","display_name":"State space","level":2,"score":0.4516151249408722},{"id":"https://openalex.org/C127491075","wikidata":"https://www.wikidata.org/wiki/Q7617825","display_name":"Stochastic modelling","level":2,"score":0.4477529227733612},{"id":"https://openalex.org/C47822265","wikidata":"https://www.wikidata.org/wiki/Q854457","display_name":"Complex system","level":2,"score":0.43484047055244446},{"id":"https://openalex.org/C50897621","wikidata":"https://www.wikidata.org/wiki/Q2665508","display_name":"Hybrid system","level":2,"score":0.41253942251205444},{"id":"https://openalex.org/C66024118","wikidata":"https://www.wikidata.org/wiki/Q1122506","display_name":"Computational model","level":2,"score":0.41142839193344116},{"id":"https://openalex.org/C186060115","wikidata":"https://www.wikidata.org/wiki/Q30336093","display_name":"Biological system","level":1,"score":0.4081447720527649},{"id":"https://openalex.org/C126255220","wikidata":"https://www.wikidata.org/wiki/Q141495","display_name":"Mathematical optimization","level":1,"score":0.36792585253715515},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.352234423160553},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.2567879855632782},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.16610026359558105},{"id":"https://openalex.org/C158622935","wikidata":"https://www.wikidata.org/wiki/Q660848","display_name":"Nonlinear system","level":2,"score":0.15202656388282776},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.14716404676437378},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.11020508408546448},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0}],"mesh":[],"locations_count":5,"locations":[{"id":"doi:10.1137/21m1418575","is_oa":false,"landing_page_url":"https://doi.org/10.1137/21m1418575","pdf_url":null,"source":{"id":"https://openalex.org/S4357572","display_name":"Multiscale Modeling and Simulation","issn_l":"1540-3459","issn":["1540-3459","1540-3467"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320508","host_organization_name":"Society for Industrial and Applied Mathematics","host_organization_lineage":["https://openalex.org/P4310320508"],"host_organization_lineage_names":["Society for Industrial and Applied Mathematics"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Multiscale Modeling &amp; Simulation","raw_type":"journal-article"},{"id":"pmh:oai:arXiv.org:2105.03398","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2105.03398","pdf_url":"https://arxiv.org/pdf/2105.03398","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},{"id":"mag:3163866096","is_oa":true,"landing_page_url":"http://arxiv.org/pdf/2105.03398.pdf","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"arXiv (Cornell University)","raw_type":null},{"id":"pmh:oai:ora.ox.ac.uk:uuid:29b5c581-d707-411d-83e7-a574fb0c545c","is_oa":false,"landing_page_url":"https://ora.ox.ac.uk/objects/uuid:29b5c581-d707-411d-83e7-a574fb0c545c","pdf_url":null,"source":{"id":"https://openalex.org/S4306402636","display_name":"Oxford University Research Archive (ORA) (University of Oxford)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I40120149","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/I40120149"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Symplectic Elements","raw_type":"Journal article"},{"id":"doi:10.48550/arxiv.2105.03398","is_oa":true,"landing_page_url":"https://doi.org/10.48550/arxiv.2105.03398","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"Preprint"}],"best_oa_location":{"id":"pmh:oai:arXiv.org:2105.03398","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2105.03398","pdf_url":"https://arxiv.org/pdf/2105.03398","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G5517807954","display_name":null,"funder_award_id":"RTI2018-098322-B-I00","funder_id":"https://openalex.org/F4320326262","funder_display_name":"Ministerio de Asuntos Econ\u00f3micos y Transformaci\u00f3n Digital, Gobierno de Espa\u00f1a"},{"id":"https://openalex.org/G7684978506","display_name":null,"funder_award_id":"MTM2015-71509-C2-1-R","funder_id":"https://openalex.org/F4320326262","funder_display_name":"Ministerio de Asuntos Econ\u00f3micos y Transformaci\u00f3n Digital, Gobierno de Espa\u00f1a"}],"funders":[{"id":"https://openalex.org/F4320312058","display_name":"\u201cla Caixa\u201d Foundation","ror":"https://ror.org/03zhx9h04"},{"id":"https://openalex.org/F4320315803","display_name":"Centres de Recerca de Catalunya","ror":null},{"id":"https://openalex.org/F4320321505","display_name":"Generalitat de Catalunya","ror":"https://ror.org/01bg62x04"},{"id":"https://openalex.org/F4320326262","display_name":"Ministerio de Asuntos Econ\u00f3micos y Transformaci\u00f3n Digital, Gobierno de Espa\u00f1a","ror":"https://ror.org/03sv46s19"},{"id":"https://openalex.org/F4320334830","display_name":"Ag\u00e8ncia de Gesti\u00f3 d'Ajuts Universitaris i de Recerca","ror":"https://ror.org/01n4pqe45"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3163866096.pdf","grobid_xml":"https://content.openalex.org/works/W3163866096.grobid-xml"},"referenced_works_count":38,"referenced_works":["https://openalex.org/W1689351220","https://openalex.org/W1972633005","https://openalex.org/W1976904080","https://openalex.org/W1982903250","https://openalex.org/W1991797784","https://openalex.org/W1992428669","https://openalex.org/W1993497453","https://openalex.org/W1993523135","https://openalex.org/W2001657041","https://openalex.org/W2013537947","https://openalex.org/W2036849484","https://openalex.org/W2038786403","https://openalex.org/W2042321087","https://openalex.org/W2043854809","https://openalex.org/W2044381443","https://openalex.org/W2076609940","https://openalex.org/W2087357622","https://openalex.org/W2089340422","https://openalex.org/W2096252516","https://openalex.org/W2112251383","https://openalex.org/W2120629640","https://openalex.org/W2136566931","https://openalex.org/W2142171814","https://openalex.org/W2142507929","https://openalex.org/W2143055815","https://openalex.org/W2148327294","https://openalex.org/W2168957713","https://openalex.org/W2171913567","https://openalex.org/W2334873176","https://openalex.org/W2408546946","https://openalex.org/W2416392622","https://openalex.org/W2512618608","https://openalex.org/W2548966103","https://openalex.org/W2618001505","https://openalex.org/W2745090763","https://openalex.org/W2763994137","https://openalex.org/W2904520705","https://openalex.org/W3119647002"],"related_works":["https://openalex.org/W3204028109","https://openalex.org/W3091920155","https://openalex.org/W3105929354","https://openalex.org/W3117979761","https://openalex.org/W3098041616","https://openalex.org/W2905179790","https://openalex.org/W3092781360","https://openalex.org/W2951211127","https://openalex.org/W2519192276","https://openalex.org/W2197589102","https://openalex.org/W2964349235","https://openalex.org/W3161347417","https://openalex.org/W2952858607","https://openalex.org/W2952162377","https://openalex.org/W2053172733","https://openalex.org/W1536269840","https://openalex.org/W2591868251","https://openalex.org/W3099488856","https://openalex.org/W2951864740","https://openalex.org/W2029778460"],"abstract_inverted_index":{"Hybrid":[0],"multiscale":[1,223],"modeling":[2,10,131],"has":[3,213],"emerged":[4],"as":[5],"a":[6,44,70,77,85,128,138],"useful":[7],"framework":[8],"for":[9,17,118,229],"complex":[11],"biological":[12],"phenomena.":[13],"However,":[14],"when":[15],"accounting":[16],"stochasticity":[18],"in":[19,46,181],"the":[20,35,47,50,55,66,91,99,105,109,114,125,148,169,184,194,198,204,208,214,218],"internal":[21],"dynamics":[22,51,206],"of":[23,38,49,69,79,94,98,108,113,134,183,187,207,221],"agents,":[24],"these":[25],"models":[26,40],"frequently":[27],"become":[28],"computationally":[29],"expensive.":[30],"Traditional":[31],"techniques":[32],"to":[33,43,54,64,84,127,153,216],"reduce":[34,217],"computational":[36,67,200,219],"intensity":[37],"such":[39],"can":[41],"lead":[42],"reduction":[45],"richness":[48],"observed,":[52],"compared":[53],"original":[56,100,106],"system.":[57,101,210],"Here":[58],"we":[59,145],"use":[60],"large":[61],"deviation":[62],"theory":[63],"decrease":[65],"cost":[68,186,201],"spatially":[71],"extended":[72],"multiagent":[73],"stochastic":[74,209],"system":[75,115,130,196],"with":[76],"region":[78],"multistability":[80],"by":[81,137],"coarse-graining":[82],"it":[83],"continuous":[86],"time":[87],"Markov":[88],"chain":[89],"on":[90,163],"state":[92],"space":[93],"stable":[95,110],"steady":[96,111],"states":[97,112],"Our":[102,190],"technique":[103],"preserves":[104],"description":[107],"and":[116,158,173,180,232],"accounts":[117],"noise-induced":[119],"transitions":[120],"between":[121],"them.":[122],"We":[123,166],"apply":[124],"method":[126,149,212],"bistable":[129],"phenotype":[132],"specification":[133],"cells":[135],"driven":[136],"lateral":[139],"inhibition":[140],"mechanism.":[141],"For":[142],"this":[143],"system,":[144],"demonstrate":[146],"how":[147],"may":[150],"be":[151],"used":[152],"explore":[154],"different":[155],"pattern":[156,177],"configurations":[157],"unveil":[159],"robust":[160],"patterns":[161],"emerging":[162],"longer":[164],"timescales.":[165],"then":[167],"compare":[168],"full":[170],"stochastic,":[171],"coarse-grained,":[172],"mean-field":[174],"descriptions":[175],"via":[176],"quantification":[178],"metrics":[179],"terms":[182],"numerical":[185],"each":[188],"method.":[189],"results":[191],"show":[192],"that":[193],"coarse-grained":[195],"exhibits":[197],"lowest":[199],"while":[202],"preserving":[203],"rich":[205],"The":[211],"potential":[215],"complexity":[220],"hybrid":[222],"models,":[224],"making":[225],"them":[226],"more":[227],"tractable":[228],"analysis,":[230],"simulation,":[231],"hypothesis":[233],"testing.":[234]},"counts_by_year":[],"updated_date":"2026-07-15T18:14:33.161393","created_date":"2025-10-10T00:00:00"}
