{"id":"https://openalex.org/W1997227240","doi":"https://doi.org/10.1137/130933423","title":"A Kalman Filtering Perspective for Multiatlas Segmentation","display_name":"A Kalman Filtering Perspective for Multiatlas Segmentation","publication_year":2015,"publication_date":"2015-01-01","ids":{"openalex":"https://openalex.org/W1997227240","doi":"https://doi.org/10.1137/130933423","mag":"1997227240","pmid":"https://pubmed.ncbi.nlm.nih.gov/26807162"},"language":"en","primary_location":{"id":"doi:10.1137/130933423","is_oa":false,"landing_page_url":"https://doi.org/10.1137/130933423","pdf_url":null,"source":{"id":"https://openalex.org/S152600803","display_name":"SIAM Journal on Imaging Sciences","issn_l":"1936-4954","issn":["1936-4954"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320508","host_organization_name":"Society for Industrial and Applied Mathematics","host_organization_lineage":["https://openalex.org/P4310320508"],"host_organization_lineage_names":["Society for Industrial and Applied Mathematics"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"SIAM Journal on Imaging Sciences","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4722821","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101986474","display_name":"Yi Gao","orcid":"https://orcid.org/0000-0003-0094-8136"},"institutions":[{"id":"https://openalex.org/I59553526","display_name":"Stony Brook University","ror":"https://ror.org/05qghxh33","country_code":"US","type":"education","lineage":["https://openalex.org/I59553526"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yi Gao","raw_affiliation_strings":["Department of Biomedical Informatics and Department of Applied Mathematics and Statistics, Stony Brook University, Stony Brook, NY 11794"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Informatics and Department of Applied Mathematics and Statistics, Stony Brook University, Stony Brook, NY 11794","institution_ids":["https://openalex.org/I59553526"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110652383","display_name":"Liangjia Zhu","orcid":null},"institutions":[{"id":"https://openalex.org/I59553526","display_name":"Stony Brook University","ror":"https://ror.org/05qghxh33","country_code":"US","type":"education","lineage":["https://openalex.org/I59553526"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Liangjia Zhu","raw_affiliation_strings":["Department of Computer Science, Stony Brook University, Stony Brook, NY 11790"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Stony Brook University, Stony Brook, NY 11790","institution_ids":["https://openalex.org/I59553526"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040162472","display_name":"Joshua Cates","orcid":"https://orcid.org/0009-0006-3766-3539"},"institutions":[{"id":"https://openalex.org/I223532165","display_name":"University of Utah","ror":"https://ror.org/03r0ha626","country_code":"US","type":"education","lineage":["https://openalex.org/I223532165"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Joshua Cates","raw_affiliation_strings":["Scientific Computing and Imaging Institute, University of Utah, Salt Lake City, UT 84112","Scientific Computing and Imaging Institute, University of Utah, Salt Lake City UT 84112"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Scientific Computing and Imaging Institute, University of Utah, Salt Lake City, UT 84112","institution_ids":["https://openalex.org/I223532165"]},{"raw_affiliation_string":"Scientific Computing and Imaging Institute, University of Utah, Salt Lake City UT 84112","institution_ids":["https://openalex.org/I223532165"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023536951","display_name":"Rob MacLeod","orcid":"https://orcid.org/0000-0002-0000-0356"},"institutions":[{"id":"https://openalex.org/I223532165","display_name":"University of Utah","ror":"https://ror.org/03r0ha626","country_code":"US","type":"education","lineage":["https://openalex.org/I223532165"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Rob S. MacLeod","raw_affiliation_strings":["Scientific Computing and Imaging Institute, University of Utah, Salt Lake City, UT 84112","Scientific Computing and Imaging Institute, University of Utah, Salt Lake City UT 84112"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Scientific Computing and Imaging Institute, University of Utah, Salt Lake City, UT 84112","institution_ids":["https://openalex.org/I223532165"]},{"raw_affiliation_string":"Scientific Computing and Imaging Institute, University of Utah, Salt Lake City UT 84112","institution_ids":["https://openalex.org/I223532165"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002424091","display_name":"Sylvain Bouix","orcid":"https://orcid.org/0000-0003-1326-6054"},"institutions":[{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sylvain Bouix","raw_affiliation_strings":["Department of Psychiatry, Harvard Medical School, Boston, MA 02215"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Psychiatry, Harvard Medical School, Boston, MA 02215","institution_ids":["https://openalex.org/I136199984"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5012935165","display_name":"Allen Tannenbaum","orcid":"https://orcid.org/0000-0002-0567-5256"},"institutions":[{"id":"https://openalex.org/I59553526","display_name":"Stony Brook University","ror":"https://ror.org/05qghxh33","country_code":"US","type":"education","lineage":["https://openalex.org/I59553526"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Allen Tannenbaum","raw_affiliation_strings":["Department of Computer Science and Department of Applied Mathematics and Statistics, Stony Brook University, Stony Brook, NY 11794"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Department of Applied Mathematics and Statistics, Stony Brook University, Stony Brook, NY 11794","institution_ids":["https://openalex.org/I59553526"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.5616,"has_fulltext":false,"cited_by_count":4,"citation_normalized_percentile":{"value":0.74450351,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"8","issue":"2","first_page":"1007","last_page":"1029"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10191","display_name":"Robotics and Sensor-Based Localization","score":0.9957000017166138,"subfield":{"id":"https://openalex.org/subfields/2202","display_name":"Aerospace Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12549","display_name":"Image and Object Detection Techniques","score":0.9930999875068665,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/kalman-filter","display_name":"Kalman filter","score":0.7533372640609741},{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.7374335527420044},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.6300482749938965},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.629456102848053},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6114904880523682},{"id":"https://openalex.org/keywords/affine-transformation","display_name":"Affine transformation","score":0.5965203642845154},{"id":"https://openalex.org/keywords/image-segmentation","display_name":"Image segmentation","score":0.5147019028663635},{"id":"https://openalex.org/keywords/atlas","display_name":"Atlas (anatomy)","score":0.5119303464889526},{"id":"https://openalex.org/keywords/scale-space-segmentation","display_name":"Scale-space segmentation","score":0.48567211627960205},{"id":"https://openalex.org/keywords/transformation","display_name":"Transformation (genetics)","score":0.47260716557502747},{"id":"https://openalex.org/keywords/perspective","display_name":"Perspective (graphical)","score":0.4657242000102997},{"id":"https://openalex.org/keywords/computation","display_name":"Computation","score":0.42647600173950195},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.29625189304351807},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.2878921627998352}],"concepts":[{"id":"https://openalex.org/C157286648","wikidata":"https://www.wikidata.org/wiki/Q846780","display_name":"Kalman filter","level":2,"score":0.7533372640609741},{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.7374335527420044},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.6300482749938965},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.629456102848053},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6114904880523682},{"id":"https://openalex.org/C92757383","wikidata":"https://www.wikidata.org/wiki/Q382497","display_name":"Affine transformation","level":2,"score":0.5965203642845154},{"id":"https://openalex.org/C124504099","wikidata":"https://www.wikidata.org/wiki/Q56933","display_name":"Image segmentation","level":3,"score":0.5147019028663635},{"id":"https://openalex.org/C2776673561","wikidata":"https://www.wikidata.org/wiki/Q655357","display_name":"Atlas (anatomy)","level":2,"score":0.5119303464889526},{"id":"https://openalex.org/C65885262","wikidata":"https://www.wikidata.org/wiki/Q7429708","display_name":"Scale-space segmentation","level":4,"score":0.48567211627960205},{"id":"https://openalex.org/C204241405","wikidata":"https://www.wikidata.org/wiki/Q461499","display_name":"Transformation (genetics)","level":3,"score":0.47260716557502747},{"id":"https://openalex.org/C12713177","wikidata":"https://www.wikidata.org/wiki/Q1900281","display_name":"Perspective (graphical)","level":2,"score":0.4657242000102997},{"id":"https://openalex.org/C45374587","wikidata":"https://www.wikidata.org/wiki/Q12525525","display_name":"Computation","level":2,"score":0.42647600173950195},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.29625189304351807},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.2878921627998352},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1137/130933423","is_oa":false,"landing_page_url":"https://doi.org/10.1137/130933423","pdf_url":null,"source":{"id":"https://openalex.org/S152600803","display_name":"SIAM Journal on Imaging Sciences","issn_l":"1936-4954","issn":["1936-4954"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320508","host_organization_name":"Society for Industrial and Applied Mathematics","host_organization_lineage":["https://openalex.org/P4310320508"],"host_organization_lineage_names":["Society for Industrial and Applied Mathematics"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"SIAM Journal on Imaging Sciences","raw_type":"journal-article"},{"id":"pmid:26807162","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/26807162","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"SIAM journal on imaging sciences","raw_type":null},{"id":"pmh:oai:espace2.etsmtl.ca:24648","is_oa":false,"landing_page_url":"https://espace2.etsmtl.ca/id/eprint/24648/","pdf_url":null,"source":{"id":"https://openalex.org/S4306402392","display_name":"Espace \u00c9TS (ETS)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1341030882","host_organization_name":"Educational Testing Service","host_organization_lineage":["https://openalex.org/I1341030882"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Article publi\u00e9 dans une revue, r\u00e9vis\u00e9 par les pairs"},{"id":"pmh:oai:pubmedcentral.nih.gov:4722821","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4722821","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"SIAM J Imaging Sci","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:4722821","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4722821","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"SIAM J Imaging Sci","raw_type":"Text"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":57,"referenced_works":["https://openalex.org/W185379629","https://openalex.org/W1499269597","https://openalex.org/W1584249400","https://openalex.org/W1957009472","https://openalex.org/W1965734230","https://openalex.org/W1973965874","https://openalex.org/W1980114101","https://openalex.org/W1983147688","https://openalex.org/W1987869189","https://openalex.org/W1991456242","https://openalex.org/W1994588366","https://openalex.org/W2004293194","https://openalex.org/W2004691878","https://openalex.org/W2009301866","https://openalex.org/W2015993043","https://openalex.org/W2018662705","https://openalex.org/W2020934227","https://openalex.org/W2021549489","https://openalex.org/W2021750866","https://openalex.org/W2023553856","https://openalex.org/W2032377318","https://openalex.org/W2034931607","https://openalex.org/W2049247209","https://openalex.org/W2052617496","https://openalex.org/W2066839705","https://openalex.org/W2076114154","https://openalex.org/W2084509516","https://openalex.org/W2098613108","https://openalex.org/W2102595307","https://openalex.org/W2107600089","https://openalex.org/W2108667197","https://openalex.org/W2114467878","https://openalex.org/W2121014637","https://openalex.org/W2126599209","https://openalex.org/W2128806031","https://openalex.org/W2133086277","https://openalex.org/W2133287637","https://openalex.org/W2136145485","https://openalex.org/W2137596640","https://openalex.org/W2142456468","https://openalex.org/W2143005321","https://openalex.org/W2144585946","https://openalex.org/W2146847221","https://openalex.org/W2148157540","https://openalex.org/W2150866578","https://openalex.org/W2152416413","https://openalex.org/W2152826865","https://openalex.org/W2153464267","https://openalex.org/W2158275940","https://openalex.org/W2162140684","https://openalex.org/W2336893408","https://openalex.org/W2615439584","https://openalex.org/W2794413559","https://openalex.org/W2914749043","https://openalex.org/W2977883299","https://openalex.org/W3104298728","https://openalex.org/W4237451364"],"related_works":["https://openalex.org/W2185902295","https://openalex.org/W2103507220","https://openalex.org/W3144569342","https://openalex.org/W4313052709","https://openalex.org/W2945274617","https://openalex.org/W2022929107","https://openalex.org/W2055202857","https://openalex.org/W4205800335","https://openalex.org/W2758994127","https://openalex.org/W2386644571"],"abstract_inverted_index":{"In":[0,27],"multiatlas":[1,38,150,178,200],"segmentation,":[2,39],"one":[3],"typically":[4],"registers":[5],"several":[6],"atlases":[7],"to":[8,22,52,75,90,129,154],"the":[9,24,42,49,53,68,72,76,80,83,91,104,109,131,156],"novel":[10,54],"image,":[11],"and":[12,20,106,112,180],"their":[13],"respective":[14],"segmented":[15],"label":[16],"images":[17],"are":[18,165],"transformed":[19],"fused":[21],"form":[23],"final":[25],"segmentation.":[26],"this":[28,121,146,163],"work,":[29,147],"we":[30],"provide":[31],"a":[32,96,123,138,148,170],"new":[33,171],"dynamical":[34,124,172],"system":[35,94,125],"perspective":[36,174],"for":[37,136,175,203],"inspired":[40],"by":[41,61,101,107,184],"following":[43],"fact:":[44],"The":[45,160],"transformation":[46,69,81],"that":[47,70],"aligns":[48,71],"current":[50],"atlas":[51,74],"image":[55,77],"can":[56,194],"be":[57,195],"not":[58],"only":[59],"computed":[60],"direct":[62],"registration":[63,158],"but":[64],"also":[65],"inferred":[66],"from":[67,103],"previous":[73,110],"together":[78],"with":[79,188,197],"between":[82],"two":[84,132],"atlases.":[85],"This":[86],"process":[87],"is":[88,127,142,152,182],"similar":[89],"global":[92],"positioning":[93],"on":[95],"vehicle,":[97],"which":[98],"gets":[99],"position":[100],"inquiring":[102],"satellite":[105],"employing":[108],"location":[111],"velocity-neither":[113],"answer":[114],"in":[115,145],"isolation":[116],"being":[117],"perfect.":[118],"To":[119],"solve":[120],"problem,":[122],"scheme":[126,141],"crucial":[128],"combine":[130],"pieces":[133],"of":[134,162],"information;":[135],"example,":[137],"Kalman":[139,149,185],"filtering":[140],"used.":[143],"Accordingly,":[144],"segmentation":[151,201],"proposed":[153],"stabilize":[155],"global/affine":[157],"step.":[159],"contributions":[161],"work":[164],"twofold.":[166],"First,":[167],"it":[168,181,193],"provides":[169],"systematic":[173],"standard":[176],"independent":[177],"registrations,":[179],"solved":[183],"filtering.":[186],"Second,":[187],"very":[189],"little":[190],"extra":[191],"computation,":[192],"combined":[196],"most":[198],"existing":[199],"schemes":[202],"better":[204],"registration/segmentation":[205],"accuracy.":[206]},"counts_by_year":[{"year":2021,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":2}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
