{"id":"https://openalex.org/W2140834671","doi":"https://doi.org/10.1137/040603127","title":"Understanding the Immune Response in Tuberculosis Using Different Mathematical Models and Biological Scales","display_name":"Understanding the Immune Response in Tuberculosis Using Different Mathematical Models and Biological Scales","publication_year":2005,"publication_date":"2005-01-01","ids":{"openalex":"https://openalex.org/W2140834671","doi":"https://doi.org/10.1137/040603127","mag":"2140834671"},"language":"en","primary_location":{"id":"doi:10.1137/040603127","is_oa":false,"landing_page_url":"https://doi.org/10.1137/040603127","pdf_url":null,"source":{"id":"https://openalex.org/S4357572","display_name":"Multiscale Modeling and Simulation","issn_l":"1540-3459","issn":["1540-3459","1540-3467"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320508","host_organization_name":"Society for Industrial and Applied Mathematics","host_organization_lineage":["https://openalex.org/P4310320508"],"host_organization_lineage_names":["Society for Industrial and Applied Mathematics"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Multiscale Modeling &amp; Simulation","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5077725172","display_name":"David Gammack","orcid":null},"institutions":[{"id":"https://openalex.org/I27837315","display_name":"University of Michigan\u2013Ann Arbor","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"David Gammack","raw_affiliation_strings":["(University of Michigan)"],"affiliations":[{"raw_affiliation_string":"(University of Michigan)","institution_ids":["https://openalex.org/I27837315"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083114316","display_name":"Suman Ganguli","orcid":null},"institutions":[{"id":"https://openalex.org/I27837315","display_name":"University of Michigan\u2013Ann Arbor","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Suman Ganguli","raw_affiliation_strings":["(University of Michigan)"],"affiliations":[{"raw_affiliation_string":"(University of Michigan)","institution_ids":["https://openalex.org/I27837315"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012365542","display_name":"Simeone Marino","orcid":"https://orcid.org/0000-0002-0051-8198"},"institutions":[{"id":"https://openalex.org/I4210124771","display_name":"Bipar","ror":"https://ror.org/027364b18","country_code":"FR","type":"facility","lineage":["https://openalex.org/I17606148","https://openalex.org/I197681013","https://openalex.org/I4210088668","https://openalex.org/I4210099460","https://openalex.org/I4210124771","https://openalex.org/I4210138120","https://openalex.org/I4413696090"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Simeone Marino","raw_affiliation_strings":["Microbiology and Immunology"],"affiliations":[{"raw_affiliation_string":"Microbiology and Immunology","institution_ids":["https://openalex.org/I4210124771"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081909500","display_name":"Jos\u00e9 Segovia-Ju\u00e1rez","orcid":"https://orcid.org/0000-0002-3332-5886"},"institutions":[{"id":"https://openalex.org/I27837315","display_name":"University of Michigan\u2013Ann Arbor","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jose Segovia-Juarez","raw_affiliation_strings":["(University of Michigan)"],"affiliations":[{"raw_affiliation_string":"(University of Michigan)","institution_ids":["https://openalex.org/I27837315"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5067786863","display_name":"Denise E. Kirschner","orcid":"https://orcid.org/0000-0002-1053-2591"},"institutions":[{"id":"https://openalex.org/I4210124771","display_name":"Bipar","ror":"https://ror.org/027364b18","country_code":"FR","type":"facility","lineage":["https://openalex.org/I17606148","https://openalex.org/I197681013","https://openalex.org/I4210088668","https://openalex.org/I4210099460","https://openalex.org/I4210124771","https://openalex.org/I4210138120","https://openalex.org/I4413696090"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Denise E. Kirschner","raw_affiliation_strings":["Microbiology and Immunology"],"affiliations":[{"raw_affiliation_string":"Microbiology and Immunology","institution_ids":["https://openalex.org/I4210124771"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5077725172"],"corresponding_institution_ids":["https://openalex.org/I27837315"],"apc_list":null,"apc_paid":null,"fwci":0.7237,"has_fulltext":false,"cited_by_count":62,"citation_normalized_percentile":{"value":0.69737884,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":99},"biblio":{"volume":"3","issue":"2","first_page":"312","last_page":"345"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10580","display_name":"Immunotherapy and Immune Responses","score":0.9952999949455261,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10580","display_name":"Immunotherapy and Immune Responses","score":0.9952999949455261,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10038","display_name":"Tuberculosis Research and Epidemiology","score":0.9908000230789185,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11829","display_name":"Mathematical Biology Tumor Growth","score":0.989300012588501,"subfield":{"id":"https://openalex.org/subfields/2611","display_name":"Modeling and Simulation"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/immune-system","display_name":"Immune system","score":0.7934925556182861},{"id":"https://openalex.org/keywords/tuberculosis","display_name":"Tuberculosis","score":0.6847599744796753},{"id":"https://openalex.org/keywords/mycobacterium-tuberculosis","display_name":"Mycobacterium tuberculosis","score":0.6583282351493835},{"id":"https://openalex.org/keywords/spleen","display_name":"Spleen","score":0.5282237529754639},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4815978705883026},{"id":"https://openalex.org/keywords/immunology","display_name":"Immunology","score":0.46383723616600037},{"id":"https://openalex.org/keywords/lymph","display_name":"Lymph","score":0.449604332447052},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.41250935196876526},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.36781829595565796},{"id":"https://openalex.org/keywords/biological-system","display_name":"Biological system","score":0.335707426071167},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.19202172756195068},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.12702977657318115}],"concepts":[{"id":"https://openalex.org/C8891405","wikidata":"https://www.wikidata.org/wiki/Q1059","display_name":"Immune system","level":2,"score":0.7934925556182861},{"id":"https://openalex.org/C2781069245","wikidata":"https://www.wikidata.org/wiki/Q12204","display_name":"Tuberculosis","level":2,"score":0.6847599744796753},{"id":"https://openalex.org/C2777975735","wikidata":"https://www.wikidata.org/wiki/Q130971","display_name":"Mycobacterium tuberculosis","level":3,"score":0.6583282351493835},{"id":"https://openalex.org/C2780931953","wikidata":"https://www.wikidata.org/wiki/Q9371","display_name":"Spleen","level":2,"score":0.5282237529754639},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4815978705883026},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.46383723616600037},{"id":"https://openalex.org/C2779720271","wikidata":"https://www.wikidata.org/wiki/Q179422","display_name":"Lymph","level":2,"score":0.449604332447052},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.41250935196876526},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.36781829595565796},{"id":"https://openalex.org/C186060115","wikidata":"https://www.wikidata.org/wiki/Q30336093","display_name":"Biological system","level":1,"score":0.335707426071167},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.19202172756195068},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.12702977657318115}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1137/040603127","is_oa":false,"landing_page_url":"https://doi.org/10.1137/040603127","pdf_url":null,"source":{"id":"https://openalex.org/S4357572","display_name":"Multiscale Modeling and Simulation","issn_l":"1540-3459","issn":["1540-3459","1540-3467"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320508","host_organization_name":"Society for Industrial and Applied Mathematics","host_organization_lineage":["https://openalex.org/P4310320508"],"host_organization_lineage_names":["Society for Industrial and Applied Mathematics"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Multiscale Modeling &amp; Simulation","raw_type":"journal-article"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.117.2891","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.117.2891","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://malthus.micro.med.umich.edu/lab/pubs/60312.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.521.1311","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.521.1311","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.upch.edu.pe/facien/fc/postgrado/pginfo08/images/stories/segovia/siam2005.pdf","raw_type":"text"},{"id":"pmh:oai:eprints.soton.ac.uk:480339","is_oa":false,"landing_page_url":"https://eprints.soton.ac.uk/480339/","pdf_url":null,"source":{"id":"https://openalex.org/S4306401019","display_name":"ePrints Soton (University of Southampton)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I43439940","host_organization_name":"University of Southampton","host_organization_lineage":["https://openalex.org/I43439940"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Article"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Good health and well-being","score":0.7799999713897705,"id":"https://metadata.un.org/sdg/3"}],"awards":[{"id":"https://openalex.org/G5628143678","display_name":null,"funder_award_id":"HL68526","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":74,"referenced_works":["https://openalex.org/W1501219137","https://openalex.org/W1538029215","https://openalex.org/W1597666737","https://openalex.org/W1661544713","https://openalex.org/W1683960100","https://openalex.org/W1799454977","https://openalex.org/W1813609667","https://openalex.org/W1818840099","https://openalex.org/W1897226866","https://openalex.org/W1903734129","https://openalex.org/W1905061145","https://openalex.org/W1965658210","https://openalex.org/W1967522361","https://openalex.org/W1970094913","https://openalex.org/W1972178529","https://openalex.org/W1978941072","https://openalex.org/W1988412343","https://openalex.org/W1988519719","https://openalex.org/W1992033406","https://openalex.org/W1995964568","https://openalex.org/W1999294456","https://openalex.org/W2000983290","https://openalex.org/W2003652884","https://openalex.org/W2007430988","https://openalex.org/W2007750828","https://openalex.org/W2008191529","https://openalex.org/W2008701871","https://openalex.org/W2009351733","https://openalex.org/W2021117151","https://openalex.org/W2027091123","https://openalex.org/W2027657858","https://openalex.org/W2029205446","https://openalex.org/W2030900501","https://openalex.org/W2036639161","https://openalex.org/W2036919025","https://openalex.org/W2038424276","https://openalex.org/W2038669746","https://openalex.org/W2046177867","https://openalex.org/W2048340356","https://openalex.org/W2077884399","https://openalex.org/W2087411804","https://openalex.org/W2092509730","https://openalex.org/W2096405961","https://openalex.org/W2099176480","https://openalex.org/W2102888433","https://openalex.org/W2104941073","https://openalex.org/W2105662343","https://openalex.org/W2106104958","https://openalex.org/W2109484445","https://openalex.org/W2109663596","https://openalex.org/W2111220263","https://openalex.org/W2111746777","https://openalex.org/W2114308840","https://openalex.org/W2115438934","https://openalex.org/W2118758782","https://openalex.org/W2121467746","https://openalex.org/W2130046741","https://openalex.org/W2130370541","https://openalex.org/W2141890333","https://openalex.org/W2142066728","https://openalex.org/W2144278714","https://openalex.org/W2149460956","https://openalex.org/W2151612737","https://openalex.org/W2152944822","https://openalex.org/W2160040629","https://openalex.org/W2162660367","https://openalex.org/W2164081168","https://openalex.org/W2170240282","https://openalex.org/W2171414034","https://openalex.org/W2227672922","https://openalex.org/W2317145780","https://openalex.org/W2405245954","https://openalex.org/W2411376140","https://openalex.org/W4249113534"],"related_works":["https://openalex.org/W2030633873","https://openalex.org/W4306839112","https://openalex.org/W2788398649","https://openalex.org/W2081358646","https://openalex.org/W2349894740","https://openalex.org/W4377940992","https://openalex.org/W2405291546","https://openalex.org/W3028987687","https://openalex.org/W2761385502","https://openalex.org/W3179930708"],"abstract_inverted_index":{"The":[0,152],"use":[1,92],"of":[2,38,56,69,75,79,125],"different":[3,17,94],"mathematical":[4,95],"tools":[5,96,153],"to":[6,12,28,97,131,137],"study":[7,21],"biological":[8],"processes":[9],"is":[10],"necessary":[11],"capture":[13],"effects":[14],"occurring":[15],"at":[16,66],"scales.":[18],"Here":[19],"we":[20,91],"as":[22,51,53,86,104,106,165],"an":[23],"example":[24],"the":[25,31,35,61,67,73,100,107,144],"immune":[26,62,102],"response":[27,63,103],"infection":[29,70],"with":[30],"bacteria":[32],"Mycobacterium":[33],"tuberculosis,":[34],"causative":[36],"agent":[37],"tuberculosis":[39],"(TB).":[40],"Immune":[41],"responses":[42],"are":[43,158],"both":[44,99],"global":[45,101],"(lymph":[46],"nodes,":[47],"blood,":[48],"and":[49,82,113,115,140,155],"spleen)":[50],"well":[52,105],"local":[54,109],"(site":[55],"infection)":[57],"in":[58,64,72,161],"nature.":[59],"Interestingly,":[60],"TB":[65],"site":[68],"results":[71,117],"formation":[74],"spherical":[76],"structures":[77],"comprised":[78],"cells,":[80],"bacteria,":[81],"effector":[83],"molecules":[84],"known":[85],"granulomas.":[87],"In":[88],"this":[89],"work,":[90],"four":[93],"explore":[98],"more":[108],"one":[110],"(granuloma":[111],"formation)":[112],"compare":[114],"contrast":[116],"obtained":[118],"using":[119],"these":[120],"methods.":[121],"Applying":[122],"a":[123],"range":[124],"approaches":[126],"from":[127],"continuous":[128],"deterministic":[129],"models":[130],"discrete":[132],"stochastic":[133],"ones":[134],"allows":[135],"us":[136],"make":[138],"predictions":[139],"suggest":[141],"hypotheses":[142],"about":[143],"underlying":[145],"biology":[146],"that":[147],"might":[148],"otherwise":[149],"go":[150],"unnoticed.":[151],"developed":[154],"applied":[156],"here":[157],"also":[159],"applicable":[160],"other":[162],"settings":[163],"such":[164],"tumor":[166],"modeling.":[167]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":5},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":4},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":4},{"year":2014,"cited_by_count":6},{"year":2013,"cited_by_count":3},{"year":2012,"cited_by_count":6}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
