{"id":"https://openalex.org/W2166562585","doi":"https://doi.org/10.1136/amiajnl-2014-002710","title":"Registration of whole immunohistochemical slide images: an efficient way to characterize biomarker colocalization","display_name":"Registration of whole immunohistochemical slide images: an efficient way to characterize biomarker colocalization","publication_year":2014,"publication_date":"2014-08-14","ids":{"openalex":"https://openalex.org/W2166562585","doi":"https://doi.org/10.1136/amiajnl-2014-002710","mag":"2166562585","pmid":"https://pubmed.ncbi.nlm.nih.gov/25125687"},"language":"en","primary_location":{"id":"doi:10.1136/amiajnl-2014-002710","is_oa":true,"landing_page_url":"https://doi.org/10.1136/amiajnl-2014-002710","pdf_url":"https://academic.oup.com/jamia/article-pdf/22/1/86/34145255/amiajnl-2014-002710.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/jamia/article-pdf/22/1/86/34145255/amiajnl-2014-002710.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5014487560","display_name":"Xavier Moles Lopez","orcid":null},"institutions":[{"id":"https://openalex.org/I4210132484","display_name":"VIB-UAntwerp Center for Molecular Neurology","ror":"https://ror.org/041x7eh14","country_code":"BE","type":"facility","lineage":["https://openalex.org/I149213910","https://openalex.org/I2802017950","https://openalex.org/I4210132484"]},{"id":"https://openalex.org/I132053463","display_name":"Universit\u00e9 Libre de Bruxelles","ror":"https://ror.org/01r9htc13","country_code":"BE","type":"education","lineage":["https://openalex.org/I132053463"]}],"countries":["BE"],"is_corresponding":true,"raw_author_name":"Xavier Moles Lopez","raw_affiliation_strings":["DIAPath, Center for Microscopy and Molecular Imaging (CMMI), Gosselies, Belgium","Laboratories of Image, Signal Processing and Acoustics, \u00c9cole Polytechnique de Bruxelles, Universit\u00e9 Libre de Bruxelles, Bruxelles, Belgium"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"DIAPath, Center for Microscopy and Molecular Imaging (CMMI), Gosselies, Belgium","institution_ids":["https://openalex.org/I4210132484"]},{"raw_affiliation_string":"Laboratories of Image, Signal Processing and Acoustics, \u00c9cole Polytechnique de Bruxelles, Universit\u00e9 Libre de Bruxelles, Bruxelles, Belgium","institution_ids":["https://openalex.org/I132053463"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031898249","display_name":"Paul Barbot","orcid":null},"institutions":[{"id":"https://openalex.org/I4210132484","display_name":"VIB-UAntwerp Center for Molecular Neurology","ror":"https://ror.org/041x7eh14","country_code":"BE","type":"facility","lineage":["https://openalex.org/I149213910","https://openalex.org/I2802017950","https://openalex.org/I4210132484"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Paul Barbot","raw_affiliation_strings":["DIAPath, Center for Microscopy and Molecular Imaging (CMMI), Gosselies, Belgium"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"DIAPath, Center for Microscopy and Molecular Imaging (CMMI), Gosselies, Belgium","institution_ids":["https://openalex.org/I4210132484"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021112552","display_name":"Yves\u2010R\u00e9mi Van Eycke","orcid":"https://orcid.org/0000-0002-7131-1784"},"institutions":[{"id":"https://openalex.org/I4210132484","display_name":"VIB-UAntwerp Center for Molecular Neurology","ror":"https://ror.org/041x7eh14","country_code":"BE","type":"facility","lineage":["https://openalex.org/I149213910","https://openalex.org/I2802017950","https://openalex.org/I4210132484"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Yves-R\u00e9mi Van Eycke","raw_affiliation_strings":["DIAPath, Center for Microscopy and Molecular Imaging (CMMI), Gosselies, Belgium"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"DIAPath, Center for Microscopy and Molecular Imaging (CMMI), Gosselies, Belgium","institution_ids":["https://openalex.org/I4210132484"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021283813","display_name":"Laurine Verset","orcid":"https://orcid.org/0000-0002-4852-4386"},"institutions":[{"id":"https://openalex.org/I2802054198","display_name":"Erasmus Hospital","ror":"https://ror.org/05j1gs298","country_code":"BE","type":"healthcare","lineage":["https://openalex.org/I2802054198"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Laurine Verset","raw_affiliation_strings":["Department of Pathology, Erasme Hospital, Bruxelles, Belgium"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Pathology, Erasme Hospital, Bruxelles, Belgium","institution_ids":["https://openalex.org/I2802054198"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5114194168","display_name":"Anne\u2010Laure Tr\u00e9pant","orcid":null},"institutions":[{"id":"https://openalex.org/I2802054198","display_name":"Erasmus Hospital","ror":"https://ror.org/05j1gs298","country_code":"BE","type":"healthcare","lineage":["https://openalex.org/I2802054198"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Anne-Laure Tr\u00e9pant","raw_affiliation_strings":["Department of Pathology, Erasme Hospital, Bruxelles, Belgium"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Pathology, Erasme Hospital, Bruxelles, Belgium","institution_ids":["https://openalex.org/I2802054198"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019420018","display_name":"Lionel Larbanoix","orcid":"https://orcid.org/0000-0001-6375-1133"},"institutions":[{"id":"https://openalex.org/I4210132484","display_name":"VIB-UAntwerp Center for Molecular Neurology","ror":"https://ror.org/041x7eh14","country_code":"BE","type":"facility","lineage":["https://openalex.org/I149213910","https://openalex.org/I2802017950","https://openalex.org/I4210132484"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Lionel Larbanoix","raw_affiliation_strings":["DIAPath, Center for Microscopy and Molecular Imaging (CMMI), Gosselies, Belgium"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"DIAPath, Center for Microscopy and Molecular Imaging (CMMI), Gosselies, Belgium","institution_ids":["https://openalex.org/I4210132484"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062356516","display_name":"Isabelle Salmon","orcid":"https://orcid.org/0000-0002-7732-2863"},"institutions":[{"id":"https://openalex.org/I4210132484","display_name":"VIB-UAntwerp Center for Molecular Neurology","ror":"https://ror.org/041x7eh14","country_code":"BE","type":"facility","lineage":["https://openalex.org/I149213910","https://openalex.org/I2802017950","https://openalex.org/I4210132484"]},{"id":"https://openalex.org/I2802054198","display_name":"Erasmus Hospital","ror":"https://ror.org/05j1gs298","country_code":"BE","type":"healthcare","lineage":["https://openalex.org/I2802054198"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Isabelle Salmon","raw_affiliation_strings":["DIAPath, Center for Microscopy and Molecular Imaging (CMMI), Gosselies, Belgium","Department of Pathology, Erasme Hospital, Bruxelles, Belgium"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"DIAPath, Center for Microscopy and Molecular Imaging (CMMI), Gosselies, Belgium","institution_ids":["https://openalex.org/I4210132484"]},{"raw_affiliation_string":"Department of Pathology, Erasme Hospital, Bruxelles, Belgium","institution_ids":["https://openalex.org/I2802054198"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5052532082","display_name":"Christine Decaestecker","orcid":"https://orcid.org/0000-0002-5495-1931"},"institutions":[{"id":"https://openalex.org/I132053463","display_name":"Universit\u00e9 Libre de Bruxelles","ror":"https://ror.org/01r9htc13","country_code":"BE","type":"education","lineage":["https://openalex.org/I132053463"]},{"id":"https://openalex.org/I4210132484","display_name":"VIB-UAntwerp Center for Molecular Neurology","ror":"https://ror.org/041x7eh14","country_code":"BE","type":"facility","lineage":["https://openalex.org/I149213910","https://openalex.org/I2802017950","https://openalex.org/I4210132484"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Christine Decaestecker","raw_affiliation_strings":["DIAPath, Center for Microscopy and Molecular Imaging (CMMI), Gosselies, Belgium","Laboratories of Image, Signal Processing and Acoustics, \u00c9cole Polytechnique de Bruxelles, Universit\u00e9 Libre de Bruxelles, Bruxelles, Belgium"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"DIAPath, Center for Microscopy and Molecular Imaging (CMMI), Gosselies, Belgium","institution_ids":["https://openalex.org/I4210132484"]},{"raw_affiliation_string":"Laboratories of Image, Signal Processing and Acoustics, \u00c9cole Polytechnique de Bruxelles, Universit\u00e9 Libre de Bruxelles, Bruxelles, Belgium","institution_ids":["https://openalex.org/I132053463"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5014487560"],"corresponding_institution_ids":["https://openalex.org/I132053463","https://openalex.org/I4210132484"],"apc_list":{"value":3967,"currency":"USD","value_usd":3967},"apc_paid":null,"fwci":2.8994,"has_fulltext":false,"cited_by_count":31,"citation_normalized_percentile":{"value":0.91341021,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"22","issue":"1","first_page":"86","last_page":"99"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.18240000307559967,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.18240000307559967,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.10080000013113022,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.07500000298023224,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/colocalization","display_name":"Colocalization","score":0.9431486129760742},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7173865437507629},{"id":"https://openalex.org/keywords/immunohistochemistry","display_name":"Immunohistochemistry","score":0.6077750325202942},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5286966562271118},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.48858603835105896},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.4254217743873596},{"id":"https://openalex.org/keywords/scale","display_name":"Scale (ratio)","score":0.41164225339889526},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.3657718896865845},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.34584149718284607},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.18367308378219604},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.16796237230300903},{"id":"https://openalex.org/keywords/cell-biology","display_name":"Cell biology","score":0.08405447006225586}],"concepts":[{"id":"https://openalex.org/C40209533","wikidata":"https://www.wikidata.org/wiki/Q5147828","display_name":"Colocalization","level":2,"score":0.9431486129760742},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7173865437507629},{"id":"https://openalex.org/C204232928","wikidata":"https://www.wikidata.org/wiki/Q899285","display_name":"Immunohistochemistry","level":2,"score":0.6077750325202942},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5286966562271118},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.48858603835105896},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.4254217743873596},{"id":"https://openalex.org/C2778755073","wikidata":"https://www.wikidata.org/wiki/Q10858537","display_name":"Scale (ratio)","level":2,"score":0.41164225339889526},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.3657718896865845},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.34584149718284607},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.18367308378219604},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.16796237230300903},{"id":"https://openalex.org/C95444343","wikidata":"https://www.wikidata.org/wiki/Q7141","display_name":"Cell biology","level":1,"score":0.08405447006225586},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D002477","descriptor_name":"Cells","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D002477","descriptor_name":"Cells","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D002477","descriptor_name":"Cells","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D006652","descriptor_name":"Histological Techniques","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006652","descriptor_name":"Histological Techniques","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006652","descriptor_name":"Histological Techniques","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007090","descriptor_name":"Image Interpretation, Computer-Assisted","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007090","descriptor_name":"Image Interpretation, Computer-Assisted","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007090","descriptor_name":"Image Interpretation, Computer-Assisted","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007150","descriptor_name":"Immunohistochemistry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007150","descriptor_name":"Immunohistochemistry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007150","descriptor_name":"Immunohistochemistry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1136/amiajnl-2014-002710","is_oa":true,"landing_page_url":"https://doi.org/10.1136/amiajnl-2014-002710","pdf_url":"https://academic.oup.com/jamia/article-pdf/22/1/86/34145255/amiajnl-2014-002710.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},{"id":"pmid:25125687","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/25125687","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association : JAMIA","raw_type":null},{"id":"pmh:oai:dipot.ulb.ac.be:2013/177042","is_oa":false,"landing_page_url":"http://hdl.handle.net/2013/ULB-DIPOT:oai:dipot.ulb.ac.be:2013/177042","pdf_url":null,"source":{"id":"https://openalex.org/S4306401063","display_name":"D\u00e9p\u00f4t institutionnel de l'Universit\u00e9 libre de Bruxelles (Universit\u00e9 Libre de Bruxelles)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I132053463","host_organization_name":"Universit\u00e9 Libre de Bruxelles","host_organization_lineage":["https://openalex.org/I132053463"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of the American Medical Informatics Association, 22 (1","raw_type":"info:ulb-repo/semantics/openurl/article"},{"id":"pmh:oai:europepmc.org:3670610","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4433366","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1136/amiajnl-2014-002710","is_oa":true,"landing_page_url":"https://doi.org/10.1136/amiajnl-2014-002710","pdf_url":"https://academic.oup.com/jamia/article-pdf/22/1/86/34145255/amiajnl-2014-002710.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2166562585.pdf","grobid_xml":"https://content.openalex.org/works/W2166562585.grobid-xml"},"referenced_works_count":42,"referenced_works":["https://openalex.org/W56656279","https://openalex.org/W1483878571","https://openalex.org/W1930389944","https://openalex.org/W1967728436","https://openalex.org/W1980971505","https://openalex.org/W1988052608","https://openalex.org/W1995903446","https://openalex.org/W2004004650","https://openalex.org/W2006703181","https://openalex.org/W2022574491","https://openalex.org/W2030610213","https://openalex.org/W2037255757","https://openalex.org/W2040386819","https://openalex.org/W2056263701","https://openalex.org/W2058730747","https://openalex.org/W2064281052","https://openalex.org/W2072120864","https://openalex.org/W2074163268","https://openalex.org/W2078237160","https://openalex.org/W2079272055","https://openalex.org/W2083328021","https://openalex.org/W2089064371","https://openalex.org/W2089231735","https://openalex.org/W2094833794","https://openalex.org/W2098193057","https://openalex.org/W2105739910","https://openalex.org/W2119653719","https://openalex.org/W2121075186","https://openalex.org/W2124733101","https://openalex.org/W2127412270","https://openalex.org/W2131938193","https://openalex.org/W2132763945","https://openalex.org/W2133287637","https://openalex.org/W2140112364","https://openalex.org/W2142812792","https://openalex.org/W2149053800","https://openalex.org/W2156875677","https://openalex.org/W2157511453","https://openalex.org/W2168332252","https://openalex.org/W2168768703","https://openalex.org/W4229954146","https://openalex.org/W6602260386"],"related_works":["https://openalex.org/W1891287906","https://openalex.org/W2023310891","https://openalex.org/W2036807459","https://openalex.org/W2775347418","https://openalex.org/W1969923398","https://openalex.org/W2772917594","https://openalex.org/W2166024367","https://openalex.org/W2755342338","https://openalex.org/W3116076068","https://openalex.org/W2229312674"],"abstract_inverted_index":{"BACKGROUND":[0],"AND":[1],"OBJECTIVE:":[2],"Extracting":[3],"accurate":[4,192,210],"information":[5,32],"from":[6,42,91],"complex":[7],"biological":[8],"processes":[9],"involved":[10],"in":[11,28,139,171,206],"diseases,":[12],"such":[13,190],"as":[14,191],"cancers,":[15],"requires":[16,185],"the":[17,43,57,80,92,118,121,126,159,181,198,213,228],"simultaneous":[18],"targeting":[19],"of":[20,59,88,103,120,123,128,161,164,215,219,222,230],"multiple":[21],"proteins":[22,232],"and":[23,38,47,75,105,146,196,246],"locating":[24],"their":[25],"respective":[26],"expression":[27,229],"tissue":[29,45,94,104,165,182,224],"samples.":[30],"This":[31],"can":[33],"be":[34,55,68],"collected":[35],"by":[36,49,235],"imaging":[37],"registering":[39],"adjacent":[40,89,223],"sections":[41,90,225],"same":[44,93],"sample":[46],"stained":[48],"immunohistochemistry":[50],"(IHC).":[51],"Registration":[52],"accuracy":[53],"should":[54],"on":[56,79,125,226],"scale":[58,127,214],"a":[60,73,129,142,216,243],"few":[61,130,217],"cells":[62],"to":[63,67,84,157,194],"enable":[64],"protein":[65,199],"colocalization":[66,122,200],"assessed.":[69],"METHODS:":[70],"We":[71,96,132],"propose":[72],"simple":[74,179],"efficient":[76],"method":[77,204,241],"based":[78],"open-source":[81],"elastix":[82],"framework":[83],"register":[85],"virtual":[86,220],"slides":[87,221],"sample.":[95],"characterize":[97],"registration":[98,151,211],"accuracies":[99],"for":[100,117],"different":[101,231],"types":[102],"IHC":[106,144,155],"staining.":[107],"RESULTS:":[108],"Our":[109],"results":[110],"indicate":[111],"that":[112,135],"this":[113,137,175,207],"technique":[114,138,148,248],"is":[115,178,233],"suitable":[116],"evaluation":[119],"biomarkers":[124],"cells.":[131],"also":[133],"show":[134],"using":[136],"conjunction":[140],"with":[141,242],"sequential":[143,244],"labeling":[145,245],"erasing":[147,247],"offers":[149],"improved":[150],"accuracies.":[152],"DISCUSSION:":[153],"Brightfield":[154],"enables":[156,209,249],"address":[158],"problem":[160],"large":[162],"series":[163],"samples,":[166],"which":[167,177,227],"are":[168],"usually":[169],"required":[170],"clinical":[172],"research.":[173],"However,":[174],"approach,":[176],"at":[180],"processing":[183],"level,":[184],"challenging":[186],"image":[187],"analysis":[188],"processes,":[189],"registration,":[193],"view":[195],"extract":[197],"information.":[201],"CONCLUSIONS:":[202],"The":[203],"proposed":[205],"work":[208],"(on":[212],"cells)":[218],"evidenced":[234],"standard":[236],"IHC.":[237],"Furthermore,":[238],"combining":[239],"our":[240],"cell-scale":[250],"colocalization.":[251]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":8},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":4},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":1}],"updated_date":"2026-04-29T09:16:38.111599","created_date":"2016-06-24T00:00:00"}
