{"id":"https://openalex.org/W2107556918","doi":"https://doi.org/10.1136/amiajnl-2013-002190","title":"MedXN: an open source medication extraction and normalization tool for clinical text","display_name":"MedXN: an open source medication extraction and normalization tool for clinical text","publication_year":2014,"publication_date":"2014-03-17","ids":{"openalex":"https://openalex.org/W2107556918","doi":"https://doi.org/10.1136/amiajnl-2013-002190","mag":"2107556918","pmid":"https://pubmed.ncbi.nlm.nih.gov/24637954"},"language":"en","primary_location":{"id":"doi:10.1136/amiajnl-2013-002190","is_oa":true,"landing_page_url":"https://doi.org/10.1136/amiajnl-2013-002190","pdf_url":"https://academic.oup.com/jamia/article-pdf/21/5/858/17375955/21-5-858.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/jamia/article-pdf/21/5/858/17375955/21-5-858.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5063986559","display_name":"Sunghwan Sohn","orcid":"https://orcid.org/0000-0001-8256-2602"},"institutions":[{"id":"https://openalex.org/I1330342723","display_name":"Mayo Clinic","ror":"https://ror.org/02qp3tb03","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Sunghwan Sohn","raw_affiliation_strings":["Division of Biomedical Statistics and Informatics, Mayo Clinic, Rochester, Minnesota, USA","Division of Biomedical Statistics and Informatics , Mayo Clinic , Rochester , Minnesota , USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Biomedical Statistics and Informatics, Mayo Clinic, Rochester, Minnesota, USA","institution_ids":["https://openalex.org/I1330342723"]},{"raw_affiliation_string":"Division of Biomedical Statistics and Informatics , Mayo Clinic , Rochester , Minnesota , USA","institution_ids":["https://openalex.org/I1330342723"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032492898","display_name":"Cheryl Clark","orcid":null},"institutions":[{"id":"https://openalex.org/I44896327","display_name":"Mitre (United States)","ror":"https://ror.org/03ks2a131","country_code":"US","type":"company","lineage":["https://openalex.org/I44896327"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Cheryl Clark","raw_affiliation_strings":["MITRE, Bedford, Massachusetts, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"MITRE, Bedford, Massachusetts, USA","institution_ids":["https://openalex.org/I44896327"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089570158","display_name":"Scott Halgrim","orcid":null},"institutions":[{"id":"https://openalex.org/I1294824412","display_name":"Center for Infectious Disease Research","ror":"https://ror.org/04jkbnw46","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1294824412"]},{"id":"https://openalex.org/I1304127598","display_name":"Group Health Cooperative","ror":"https://ror.org/05kx3hd68","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1304127598"]},{"id":"https://openalex.org/I150117356","display_name":"Kaiser Permanente Washington Health Research Institute","ror":"https://ror.org/0027frf26","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I150117356"]},{"id":"https://openalex.org/I4210087846","display_name":"Kaiser Permanente Washington Health Research Institute","ror":null,"country_code":"US","type":null,"lineage":["https://openalex.org/I4210087846"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Scott R Halgrim","raw_affiliation_strings":["Group Health Research Institute, Seattle, Washington, USA","Group Health Research Institute , Seattle, Washington , USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Group Health Research Institute, Seattle, Washington, USA","institution_ids":["https://openalex.org/I150117356"]},{"raw_affiliation_string":"Group Health Research Institute , Seattle, Washington , USA","institution_ids":["https://openalex.org/I1304127598","https://openalex.org/I4210087846","https://openalex.org/I1294824412"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061053285","display_name":"Se\u00e1n Murphy","orcid":"https://orcid.org/0000-0002-6582-4065"},"institutions":[{"id":"https://openalex.org/I1330342723","display_name":"Mayo Clinic","ror":"https://ror.org/02qp3tb03","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sean P Murphy","raw_affiliation_strings":["Division of Biomedical Statistics and Informatics, Mayo Clinic, Rochester, Minnesota, USA","Division of Biomedical Statistics and Informatics , Mayo Clinic , Rochester , Minnesota , USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Biomedical Statistics and Informatics, Mayo Clinic, Rochester, Minnesota, USA","institution_ids":["https://openalex.org/I1330342723"]},{"raw_affiliation_string":"Division of Biomedical Statistics and Informatics , Mayo Clinic , Rochester , Minnesota , USA","institution_ids":["https://openalex.org/I1330342723"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060390916","display_name":"Christopher G. Chute","orcid":"https://orcid.org/0000-0001-5437-2545"},"institutions":[{"id":"https://openalex.org/I1330342723","display_name":"Mayo Clinic","ror":"https://ror.org/02qp3tb03","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Christopher G Chute","raw_affiliation_strings":["Division of Biomedical Statistics and Informatics, Mayo Clinic, Rochester, Minnesota, USA","Division of Biomedical Statistics and Informatics , Mayo Clinic , Rochester , Minnesota , USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Biomedical Statistics and Informatics, Mayo Clinic, Rochester, Minnesota, USA","institution_ids":["https://openalex.org/I1330342723"]},{"raw_affiliation_string":"Division of Biomedical Statistics and Informatics , Mayo Clinic , Rochester , Minnesota , USA","institution_ids":["https://openalex.org/I1330342723"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5101585391","display_name":"Hongfang Liu","orcid":"https://orcid.org/0000-0003-2570-3741"},"institutions":[{"id":"https://openalex.org/I1330342723","display_name":"Mayo Clinic","ror":"https://ror.org/02qp3tb03","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hongfang Liu","raw_affiliation_strings":["Division of Biomedical Statistics and Informatics, Mayo Clinic, Rochester, Minnesota, USA","Division of Biomedical Statistics and Informatics , Mayo Clinic , Rochester , Minnesota , USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Biomedical Statistics and Informatics, Mayo Clinic, Rochester, Minnesota, USA","institution_ids":["https://openalex.org/I1330342723"]},{"raw_affiliation_string":"Division of Biomedical Statistics and Informatics , Mayo Clinic , Rochester , Minnesota , USA","institution_ids":["https://openalex.org/I1330342723"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5063986559"],"corresponding_institution_ids":["https://openalex.org/I1330342723"],"apc_list":{"value":3967,"currency":"USD","value_usd":3967},"apc_paid":null,"fwci":2.9881,"has_fulltext":false,"cited_by_count":113,"citation_normalized_percentile":{"value":0.91805435,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":100},"biblio":{"volume":"21","issue":"5","first_page":"858","last_page":"865"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.4765999913215637,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.4765999913215637,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.33160001039505005,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10350","display_name":"Electronic Health Records Systems","score":0.029200000688433647,"subfield":{"id":"https://openalex.org/subfields/3605","display_name":"Health Information Management"},"field":{"id":"https://openalex.org/fields/36","display_name":"Health Professions"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/normalization","display_name":"Normalization (sociology)","score":0.764716625213623},{"id":"https://openalex.org/keywords/open-source","display_name":"Open source","score":0.6918323040008545},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6082800626754761},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.4463910162448883},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.35957232117652893},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.3562137186527252},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.07428786158561707},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.056262314319610596}],"concepts":[{"id":"https://openalex.org/C136886441","wikidata":"https://www.wikidata.org/wiki/Q926129","display_name":"Normalization (sociology)","level":2,"score":0.764716625213623},{"id":"https://openalex.org/C3018397939","wikidata":"https://www.wikidata.org/wiki/Q3644502","display_name":"Open source","level":3,"score":0.6918323040008545},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6082800626754761},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.4463910162448883},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.35957232117652893},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3562137186527252},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.07428786158561707},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.056262314319610596},{"id":"https://openalex.org/C19165224","wikidata":"https://www.wikidata.org/wiki/Q23404","display_name":"Anthropology","level":1,"score":0.0},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D004358","descriptor_name":"Drug Therapy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004358","descriptor_name":"Drug Therapy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004358","descriptor_name":"Drug Therapy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004364","descriptor_name":"Pharmaceutical Preparations","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004364","descriptor_name":"Pharmaceutical Preparations","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004364","descriptor_name":"Pharmaceutical Preparations","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D062245","descriptor_name":"RxNorm","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D062245","descriptor_name":"RxNorm","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D062245","descriptor_name":"RxNorm","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1136/amiajnl-2013-002190","is_oa":true,"landing_page_url":"https://doi.org/10.1136/amiajnl-2013-002190","pdf_url":"https://academic.oup.com/jamia/article-pdf/21/5/858/17375955/21-5-858.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},{"id":"pmid:24637954","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/24637954","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association : JAMIA","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:4147619","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4147619","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Am Med Inform Assoc","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1136/amiajnl-2013-002190","is_oa":true,"landing_page_url":"https://doi.org/10.1136/amiajnl-2013-002190","pdf_url":"https://academic.oup.com/jamia/article-pdf/21/5/858/17375955/21-5-858.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.41999998688697815,"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education"}],"awards":[{"id":"https://openalex.org/G2858025007","display_name":null,"funder_award_id":"R01 LM009959","funder_id":"https://openalex.org/F4320337372","funder_display_name":"U.S. National Library of Medicine"},{"id":"https://openalex.org/G4235952929","display_name":null,"funder_award_id":"R01LM009959A1","funder_id":"https://openalex.org/F4320337372","funder_display_name":"U.S. National Library of Medicine"},{"id":"https://openalex.org/G4813256608","display_name":null,"funder_award_id":"R01GM102282A1","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G7999594839","display_name":null,"funder_award_id":"R01 GM102282","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"}],"funders":[{"id":"https://openalex.org/F4320337354","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07"},{"id":"https://openalex.org/F4320337372","display_name":"U.S. National Library of Medicine","ror":"https://ror.org/0060t0j89"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":56,"referenced_works":["https://openalex.org/W1177723","https://openalex.org/W73222560","https://openalex.org/W151663835","https://openalex.org/W155235004","https://openalex.org/W228695004","https://openalex.org/W1489295663","https://openalex.org/W1504212872","https://openalex.org/W1527557040","https://openalex.org/W1541322638","https://openalex.org/W1595215135","https://openalex.org/W1602694398","https://openalex.org/W1845214076","https://openalex.org/W1847373394","https://openalex.org/W1871067837","https://openalex.org/W1969759334","https://openalex.org/W1991119920","https://openalex.org/W2002514548","https://openalex.org/W2034626816","https://openalex.org/W2040084683","https://openalex.org/W2053106197","https://openalex.org/W2053870274","https://openalex.org/W2060230142","https://openalex.org/W2061166439","https://openalex.org/W2099964107","https://openalex.org/W2104990432","https://openalex.org/W2106398919","https://openalex.org/W2106782755","https://openalex.org/W2107934484","https://openalex.org/W2109005707","https://openalex.org/W2111437636","https://openalex.org/W2114039834","https://openalex.org/W2114668172","https://openalex.org/W2121740558","https://openalex.org/W2121920862","https://openalex.org/W2122402213","https://openalex.org/W2122504306","https://openalex.org/W2125260686","https://openalex.org/W2126276057","https://openalex.org/W2128279348","https://openalex.org/W2146089916","https://openalex.org/W2159636537","https://openalex.org/W2167992389","https://openalex.org/W2235527852","https://openalex.org/W2245472176","https://openalex.org/W2417961064","https://openalex.org/W4244978678","https://openalex.org/W4293236771","https://openalex.org/W4378951071","https://openalex.org/W6600052039","https://openalex.org/W6602996861","https://openalex.org/W6635725229","https://openalex.org/W6638854250","https://openalex.org/W6665709350","https://openalex.org/W6689419411","https://openalex.org/W6717099387","https://openalex.org/W6979029781"],"related_works":["https://openalex.org/W2591697403","https://openalex.org/W2953716828","https://openalex.org/W2904857019","https://openalex.org/W2944728705","https://openalex.org/W3011538607","https://openalex.org/W2904022177","https://openalex.org/W4321441197","https://openalex.org/W2359348847","https://openalex.org/W4294432981","https://openalex.org/W3204019825"],"abstract_inverted_index":{"OBJECTIVE:":[0],"We":[1,91],"developed":[2],"the":[3,19,71,105,171],"Medication":[4,32],"Extraction":[5],"and":[6,15,42,52,59,99,108,128,144,167,189],"Normalization":[7],"(MedXN)":[8],"system":[9,177],"to":[10,18,66,69,103,161,181,194,211],"extract":[11,182],"comprehensive":[12,183],"medication":[13,40,57,106,119,126,142,148,157,168,184,217],"information":[14,158,185],"normalize":[16],"it":[17],"most":[20,72,132],"appropriate":[21,73],"RxNorm":[22,49,67,74],"concept":[23],"unique":[24],"identifier":[25],"(RxCUI)":[26],"as":[27,29,196,198],"specifically":[28],"possible.":[30],"METHODS:":[31],"descriptions":[33],"in":[34,85,155,170,208],"clinical":[35],"notes":[36],"were":[37,45,62],"decomposed":[38],"into":[39],"name":[41,58,127,143],"attributes,":[43],"which":[44],"separately":[46],"extracted":[47],"using":[48],"dictionary":[50],"lookup":[51],"regular":[53],"expression.":[54],"Then,":[55],"each":[56],"its":[60],"attributes":[61,166],"combined":[63],"together":[64],"according":[65],"convention":[68],"find":[70],"representation.":[75],"To":[76],"do":[77],"this,":[78],"we":[79],"employed":[80,100],"serialized":[81],"hierarchical":[82],"steps":[83],"implemented":[84],"Apache's":[86],"Unstructured":[87],"Information":[88],"Management":[89],"Architecture.":[90],"also":[92],"performed":[93],"synonym":[94],"expansion,":[95],"removed":[96],"false":[97,151],"medications,":[98],"inference":[101,204],"rules":[102,205],"improve":[104],"extraction":[107],"normalization":[109,192],"performance.":[110],"RESULTS:":[111],"An":[112],"evaluation":[113],"on":[114],"test":[115],"data":[116],"of":[117,123,139,164],"397":[118],"mentions":[120],"showed":[121],"F-measures":[122,138],"0.975":[124],"for":[125,131,141,146,215],"over":[129],"0.90":[130],"attributes.":[133],"The":[134,175],"RxCUI":[135,153,195,213],"assignment":[136],"produced":[137],"0.932":[140],"0.864":[145],"full":[147,156],"information.":[149],"Most":[150],"negative":[152],"assignments":[154,214],"are":[159],"due":[160],"human":[162],"assumption":[163],"missing":[165],"names":[169],"gold":[172],"standard.":[173],"CONCLUSIONS:":[174],"MedXN":[176],"(http://sourceforge.net/projects/ohnlp/files/MedXN/)":[178],"was":[179],"able":[180],"with":[186],"high":[187],"accuracy":[188],"demonstrated":[190],"good":[191],"capability":[193],"long":[197],"explicit":[199],"evidence":[200],"existed.":[201],"More":[202],"sophisticated":[203],"might":[206],"result":[207],"further":[209],"improvements":[210],"specific":[212],"incomplete":[216],"descriptions.":[218]},"counts_by_year":[{"year":2026,"cited_by_count":4},{"year":2025,"cited_by_count":5},{"year":2024,"cited_by_count":8},{"year":2023,"cited_by_count":6},{"year":2022,"cited_by_count":10},{"year":2021,"cited_by_count":20},{"year":2020,"cited_by_count":17},{"year":2019,"cited_by_count":17},{"year":2018,"cited_by_count":5},{"year":2017,"cited_by_count":6},{"year":2016,"cited_by_count":4},{"year":2015,"cited_by_count":9},{"year":2014,"cited_by_count":2}],"updated_date":"2026-06-23T06:36:01.041984","created_date":"2025-10-10T00:00:00"}
