{"id":"https://openalex.org/W1954924279","doi":"https://doi.org/10.1136/amiajnl-2013-002028","title":"Making it personal: translational bioinformatics","display_name":"Making it personal: translational bioinformatics","publication_year":2013,"publication_date":"2013-06-11","ids":{"openalex":"https://openalex.org/W1954924279","doi":"https://doi.org/10.1136/amiajnl-2013-002028","mag":"1954924279","pmid":"https://pubmed.ncbi.nlm.nih.gov/23757438"},"language":"en","primary_location":{"id":"doi:10.1136/amiajnl-2013-002028","is_oa":true,"landing_page_url":"https://doi.org/10.1136/amiajnl-2013-002028","pdf_url":"https://academic.oup.com/jamia/article-pdf/20/4/595/5885841/20-4-595.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/jamia/article-pdf/20/4/595/5885841/20-4-595.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5036068985","display_name":"Atul J. Butte","orcid":"https://orcid.org/0000-0002-7433-2740"},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Atul J Butte","raw_affiliation_strings":["Division of Systems Medicine, Department of Pediatrics, Stanford University School of Medicine, Stanford, California, USA"],"affiliations":[{"raw_affiliation_string":"Division of Systems Medicine, Department of Pediatrics, Stanford University School of Medicine, Stanford, California, USA","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5084415954","display_name":"Lucila Ohno\u2010Machado","orcid":"https://orcid.org/0000-0002-8005-7327"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Lucila Ohno-Machado","raw_affiliation_strings":[],"affiliations":[]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5036068985"],"corresponding_institution_ids":["https://openalex.org/I97018004"],"apc_list":{"value":3967,"currency":"USD","value_usd":3967},"apc_paid":null,"fwci":4.0224,"has_fulltext":true,"cited_by_count":51,"citation_normalized_percentile":{"value":0.94400071,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"20","issue":"4","first_page":"595","last_page":"596"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9954000115394592,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9954000115394592,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.994700014591217,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9922000169754028,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/personalized-medicine","display_name":"Personalized medicine","score":0.6503705382347107},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.6186301112174988},{"id":"https://openalex.org/keywords/precision-medicine","display_name":"Precision medicine","score":0.5915564298629761},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.5041683912277222},{"id":"https://openalex.org/keywords/alternative-medicine","display_name":"Alternative medicine","score":0.4278357923030853},{"id":"https://openalex.org/keywords/lung-cancer","display_name":"Lung cancer","score":0.4119090437889099},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.40765783190727234},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.4020289182662964},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.2967016100883484},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.21562743186950684},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.12524381279945374}],"concepts":[{"id":"https://openalex.org/C32220436","wikidata":"https://www.wikidata.org/wiki/Q2072214","display_name":"Personalized medicine","level":2,"score":0.6503705382347107},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.6186301112174988},{"id":"https://openalex.org/C163763905","wikidata":"https://www.wikidata.org/wiki/Q17075943","display_name":"Precision medicine","level":2,"score":0.5915564298629761},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.5041683912277222},{"id":"https://openalex.org/C204787440","wikidata":"https://www.wikidata.org/wiki/Q188504","display_name":"Alternative medicine","level":2,"score":0.4278357923030853},{"id":"https://openalex.org/C2776256026","wikidata":"https://www.wikidata.org/wiki/Q47912","display_name":"Lung cancer","level":2,"score":0.4119090437889099},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.40765783190727234},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.4020289182662964},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.2967016100883484},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.21562743186950684},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.12524381279945374}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008490","descriptor_name":"Medical Informatics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008490","descriptor_name":"Medical Informatics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008490","descriptor_name":"Medical Informatics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057170","descriptor_name":"Translational Research, Biomedical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057170","descriptor_name":"Translational Research, Biomedical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057170","descriptor_name":"Translational Research, Biomedical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1136/amiajnl-2013-002028","is_oa":true,"landing_page_url":"https://doi.org/10.1136/amiajnl-2013-002028","pdf_url":"https://academic.oup.com/jamia/article-pdf/20/4/595/5885841/20-4-595.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},{"id":"pmid:23757438","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/23757438","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association : JAMIA","raw_type":null},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.1028.3646","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.1028.3646","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://jamia.oxfordjournals.org/content/jaminfo/20/4/595.full.pdf","raw_type":"text"},{"id":"pmh:oai:pubmedcentral.nih.gov:3721179","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3721179","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Am Med Inform Assoc","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1136/amiajnl-2013-002028","is_oa":true,"landing_page_url":"https://doi.org/10.1136/amiajnl-2013-002028","pdf_url":"https://academic.oup.com/jamia/article-pdf/20/4/595/5885841/20-4-595.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.8500000238418579,"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3"}],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1954924279.pdf","grobid_xml":"https://content.openalex.org/works/W1954924279.grobid-xml"},"referenced_works_count":2,"referenced_works":["https://openalex.org/W2107720458","https://openalex.org/W2145770068"],"related_works":["https://openalex.org/W3082935376","https://openalex.org/W3193951088","https://openalex.org/W4322484660","https://openalex.org/W2899657781","https://openalex.org/W4386960999","https://openalex.org/W2770866531","https://openalex.org/W4388011470","https://openalex.org/W4230423494","https://openalex.org/W4298001029","https://openalex.org/W4383105306"],"abstract_inverted_index":{"One":[0],"of":[1,16,19,28,80,88,105,120,137,159,178,190],"the":[2,14,25,36,41,58,112,118,135,176,213,234],"most":[3,242],"exciting":[4],"research":[5],"areas":[6],"in":[7,43,65,94,134,187,204],"Translational":[8],"Bioinformatics1":[9],",2":[10],"is":[11,76,133,149,202,217,232,248],"related":[12,50],"to":[13,32,46,51,98,155,181,225,250],"redefinition":[15],"fundamental":[17],"notions":[18],"what":[20],"constitutes":[21],"a":[22,200,210],"\u2018disease.\u2019":[23],"Nosology,":[24],"systematic":[26],"classification":[27],"diseases,":[29],"dates":[30],"back":[31],"Carl":[33],"Linnaeus,":[34],"with":[35,175],"Genera":[37],"Morborum":[38],"3":[39],"Today,":[40],"improvement":[42],"our":[44,129],"abilities":[45],"make":[47],"molecular":[48,179],"measurements":[49,180],"health":[52],"and":[53],"disease":[54,201,214],"has":[55,144,171],"largely":[56],"driven":[57],"revolution":[59],"towards":[60,127],"personalized":[61,140],"medicine.":[62],"For":[63,229],"example,":[64,230],"diseases":[66],"like":[67],"non-small":[68],"cell":[69],"lung":[70,244],"cancer":[71,138],"or":[72,85,141,215],"breast":[73],"cancer,":[74,245],"standard-of-care":[75],"now":[77],"including":[78,109],"sequencing":[79],"genes":[81],"such":[82,90],"as":[83,91,168],"EGFR":[84],"quantitating":[86],"panels":[87],"RNA":[89],"those":[92,110],"included":[93],"Oncotype":[95],"DX,":[96],"respectively,":[97],"drive":[99],"therapeutic":[100],"decisions":[101],"for":[102,239],"new":[103],"subtypes":[104],"patients.":[106],"While":[107],"experts,":[108],"at":[111,209],"National":[113],"Research":[114],"Council,":[115],"are":[116],"seeing":[117],"potential":[119],"scaling":[121],"beyond":[122],"these":[123],"early":[124],"case":[125],"examples":[126],"redefining":[128],"entire":[130],"nosology,4":[131],"it":[132,247],"field":[136],"where":[139],"precision":[142,169],"medicine":[143,196],"had":[145],"best":[146],"traction.":[147],"It":[148],"no":[150],"coincidence":[151],"that":[152],"many":[153,207,240],"contributions":[154],"this":[156,188,193,252],"special":[157,185],"issue":[158,189],"JAMIA":[160,191],"focus":[161],"on":[162],"cancer.":[163],"Personalized":[164],"medicine,":[165,170],"also":[166],"known":[167],"often":[172],"been":[173],"equated":[174],"use":[177,220],"characterize":[182],"disease.":[183],"The":[184],"feature":[186],"challenges":[192],"limited":[194],"view.\n\nPersonalized":[195],"starts":[197],"even":[198],"before":[199],"manifested":[203],"an":[205],"individual,":[206],"times":[208],"point":[211],"when":[212],"condition":[216],"preventable.":[218],"Researchers":[219],"data":[221],"from":[222,254],"different":[223],"sources":[224],"develop":[226],"preventive":[227],"models.":[228],"smoking":[231],"still":[233],"strongest":[235],"preventable":[236],"risk":[237],"factor":[238],"cancers,":[241],"notably":[243],"yet":[246],"hard":[249],"extract":[251],"information":[253],"\u2026":[255]},"counts_by_year":[{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":5},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":7},{"year":2014,"cited_by_count":10},{"year":2013,"cited_by_count":9},{"year":2012,"cited_by_count":11}],"updated_date":"2026-03-10T16:38:18.471706","created_date":"2025-10-10T00:00:00"}
