{"id":"https://openalex.org/W2158645702","doi":"https://doi.org/10.1136/amiajnl-2012-001020","title":"BoB, a best-of-breed automated text de-identification system for VHA clinical documents","display_name":"BoB, a best-of-breed automated text de-identification system for VHA clinical documents","publication_year":2012,"publication_date":"2012-09-04","ids":{"openalex":"https://openalex.org/W2158645702","doi":"https://doi.org/10.1136/amiajnl-2012-001020","mag":"2158645702","pmid":"https://pubmed.ncbi.nlm.nih.gov/22947391"},"language":"en","primary_location":{"id":"doi:10.1136/amiajnl-2012-001020","is_oa":true,"landing_page_url":"https://doi.org/10.1136/amiajnl-2012-001020","pdf_url":"https://academic.oup.com/jamia/article-pdf/20/1/77/17375119/20-1-77.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/jamia/article-pdf/20/1/77/17375119/20-1-77.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5110232320","display_name":"\u00d3scar Ferr\u00e1ndez","orcid":null},"institutions":[{"id":"https://openalex.org/I223532165","display_name":"University of Utah","ror":"https://ror.org/03r0ha626","country_code":"US","type":"education","lineage":["https://openalex.org/I223532165"]},{"id":"https://openalex.org/I4210089864","display_name":"VA Salt Lake City Healthcare System","ror":"https://ror.org/007fyq698","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1322918889","https://openalex.org/I2799886695","https://openalex.org/I4210089864","https://openalex.org/I4210113540"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Oscar Ferr\u00e1ndez","raw_affiliation_strings":["Department of Biomedical Informatics, University of Utah, Salt Lake City, UT 84112, USA. oscar.ferrandez@utah.edu","Department of Biomedical Informatics, University of Utah, Salt Lake City, Utah, USA","IDEAS Center, SLCVA Healthcare System, Salt Lake City, Utah, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Informatics, University of Utah, Salt Lake City, UT 84112, USA. oscar.ferrandez@utah.edu","institution_ids":["https://openalex.org/I223532165"]},{"raw_affiliation_string":"Department of Biomedical Informatics, University of Utah, Salt Lake City, Utah, USA","institution_ids":["https://openalex.org/I223532165"]},{"raw_affiliation_string":"IDEAS Center, SLCVA Healthcare System, Salt Lake City, Utah, USA","institution_ids":["https://openalex.org/I4210089864"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008552631","display_name":"Brett R. South","orcid":null},"institutions":[{"id":"https://openalex.org/I223532165","display_name":"University of Utah","ror":"https://ror.org/03r0ha626","country_code":"US","type":"education","lineage":["https://openalex.org/I223532165"]},{"id":"https://openalex.org/I4210089864","display_name":"VA Salt Lake City Healthcare System","ror":"https://ror.org/007fyq698","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1322918889","https://openalex.org/I2799886695","https://openalex.org/I4210089864","https://openalex.org/I4210113540"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Brett R South","raw_affiliation_strings":["Department of Biomedical Informatics, University of Utah, Salt Lake City, Utah, USA","IDEAS Center, SLCVA Healthcare System, Salt Lake City, Utah, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Informatics, University of Utah, Salt Lake City, Utah, USA","institution_ids":["https://openalex.org/I223532165"]},{"raw_affiliation_string":"IDEAS Center, SLCVA Healthcare System, Salt Lake City, Utah, USA","institution_ids":["https://openalex.org/I4210089864"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113710224","display_name":"Shuying Shen","orcid":"https://orcid.org/0009-0006-0817-0719"},"institutions":[{"id":"https://openalex.org/I223532165","display_name":"University of Utah","ror":"https://ror.org/03r0ha626","country_code":"US","type":"education","lineage":["https://openalex.org/I223532165"]},{"id":"https://openalex.org/I4210089864","display_name":"VA Salt Lake City Healthcare System","ror":"https://ror.org/007fyq698","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1322918889","https://openalex.org/I2799886695","https://openalex.org/I4210089864","https://openalex.org/I4210113540"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Shuying Shen","raw_affiliation_strings":["Department of Biomedical Informatics, University of Utah, Salt Lake City, Utah, USA","IDEAS Center, SLCVA Healthcare System, Salt Lake City, Utah, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Informatics, University of Utah, Salt Lake City, Utah, USA","institution_ids":["https://openalex.org/I223532165"]},{"raw_affiliation_string":"IDEAS Center, SLCVA Healthcare System, Salt Lake City, Utah, USA","institution_ids":["https://openalex.org/I4210089864"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110263609","display_name":"F Jeffrey Friedlin","orcid":null},"institutions":[{"id":"https://openalex.org/I1324682000","display_name":"Regenstrief Institute","ror":"https://ror.org/05f2ywb48","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1324682000"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"F Jeffrey Friedlin","raw_affiliation_strings":["Medical Informatics, Regenstrief Institute, Inc., Indianapolis, Indiana, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Medical Informatics, Regenstrief Institute, Inc., Indianapolis, Indiana, USA","institution_ids":["https://openalex.org/I1324682000"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078072232","display_name":"Matthew H. Samore","orcid":"https://orcid.org/0000-0002-4862-9196"},"institutions":[{"id":"https://openalex.org/I223532165","display_name":"University of Utah","ror":"https://ror.org/03r0ha626","country_code":"US","type":"education","lineage":["https://openalex.org/I223532165"]},{"id":"https://openalex.org/I4210089864","display_name":"VA Salt Lake City Healthcare System","ror":"https://ror.org/007fyq698","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1322918889","https://openalex.org/I2799886695","https://openalex.org/I4210089864","https://openalex.org/I4210113540"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Matthew H Samore","raw_affiliation_strings":["Department of Biomedical Informatics, University of Utah, Salt Lake City, Utah, USA","IDEAS Center, SLCVA Healthcare System, Salt Lake City, Utah, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Informatics, University of Utah, Salt Lake City, Utah, USA","institution_ids":["https://openalex.org/I223532165"]},{"raw_affiliation_string":"IDEAS Center, SLCVA Healthcare System, Salt Lake City, Utah, USA","institution_ids":["https://openalex.org/I4210089864"]}]},{"author_position":"last","author":{"id":null,"display_name":"St\u00e9phane M Meystre","orcid":null},"institutions":[{"id":"https://openalex.org/I223532165","display_name":"University of Utah","ror":"https://ror.org/03r0ha626","country_code":"US","type":"education","lineage":["https://openalex.org/I223532165"]},{"id":"https://openalex.org/I4210089864","display_name":"VA Salt Lake City Healthcare System","ror":"https://ror.org/007fyq698","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1322918889","https://openalex.org/I2799886695","https://openalex.org/I4210089864","https://openalex.org/I4210113540"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"St\u00e9phane M Meystre","raw_affiliation_strings":["Department of Biomedical Informatics, University of Utah, Salt Lake City, Utah, USA","IDEAS Center, SLCVA Healthcare System, Salt Lake City, Utah, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Informatics, University of Utah, Salt Lake City, Utah, USA","institution_ids":["https://openalex.org/I223532165"]},{"raw_affiliation_string":"IDEAS Center, SLCVA Healthcare System, Salt Lake City, Utah, USA","institution_ids":["https://openalex.org/I4210089864"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5110232320"],"corresponding_institution_ids":["https://openalex.org/I223532165","https://openalex.org/I4210089864"],"apc_list":{"value":3967,"currency":"USD","value_usd":3967},"apc_paid":null,"fwci":12.3999,"has_fulltext":true,"cited_by_count":80,"citation_normalized_percentile":{"value":0.98679761,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"20","issue":"1","first_page":"77","last_page":"83"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.2971999943256378,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.2971999943256378,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.21529999375343323,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10601","display_name":"Handwritten Text Recognition Techniques","score":0.08550000190734863,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6881120204925537},{"id":"https://openalex.org/keywords/protected-health-information","display_name":"Protected health information","score":0.685871958732605},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.5924234390258789},{"id":"https://openalex.org/keywords/confidentiality","display_name":"Confidentiality","score":0.5866470336914062},{"id":"https://openalex.org/keywords/security-token","display_name":"Security token","score":0.5307980179786682},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.47621187567710876},{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.4205157160758972},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.3890085220336914},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.34455329179763794},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.2186216413974762},{"id":"https://openalex.org/keywords/computer-security","display_name":"Computer security","score":0.17861619591712952},{"id":"https://openalex.org/keywords/public-health","display_name":"Public health","score":0.10289672017097473}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6881120204925537},{"id":"https://openalex.org/C133652896","wikidata":"https://www.wikidata.org/wiki/Q7251300","display_name":"Protected health information","level":5,"score":0.685871958732605},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.5924234390258789},{"id":"https://openalex.org/C71745522","wikidata":"https://www.wikidata.org/wiki/Q2476929","display_name":"Confidentiality","level":2,"score":0.5866470336914062},{"id":"https://openalex.org/C48145219","wikidata":"https://www.wikidata.org/wiki/Q1335365","display_name":"Security token","level":2,"score":0.5307980179786682},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.47621187567710876},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.4205157160758972},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3890085220336914},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.34455329179763794},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.2186216413974762},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.17861619591712952},{"id":"https://openalex.org/C138816342","wikidata":"https://www.wikidata.org/wiki/Q189603","display_name":"Public health","level":2,"score":0.10289672017097473},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C147268084","wikidata":"https://www.wikidata.org/wiki/Q5635796","display_name":"HRHIS","level":4,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C159110408","wikidata":"https://www.wikidata.org/wiki/Q121176","display_name":"Nursing","level":1,"score":0.0},{"id":"https://openalex.org/C185618831","wikidata":"https://www.wikidata.org/wiki/Q1851928","display_name":"Health promotion","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003219","descriptor_name":"Confidentiality","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003219","descriptor_name":"Confidentiality","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003219","descriptor_name":"Confidentiality","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013673","descriptor_name":"Technology Assessment, Biomedical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013673","descriptor_name":"Technology Assessment, Biomedical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013673","descriptor_name":"Technology Assessment, Biomedical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014481","descriptor_name":"United States","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014481","descriptor_name":"United States","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014481","descriptor_name":"United States","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014493","descriptor_name":"United States Department of Veterans Affairs","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014493","descriptor_name":"United States Department of Veterans Affairs","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014493","descriptor_name":"United States Department of Veterans Affairs","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D033181","descriptor_name":"Information Dissemination","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D033181","descriptor_name":"Information Dissemination","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D033181","descriptor_name":"Information Dissemination","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1136/amiajnl-2012-001020","is_oa":true,"landing_page_url":"https://doi.org/10.1136/amiajnl-2012-001020","pdf_url":"https://academic.oup.com/jamia/article-pdf/20/1/77/17375119/20-1-77.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},{"id":"pmid:22947391","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22947391","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association : JAMIA","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:3555325","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3555325","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Am Med Inform Assoc","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1136/amiajnl-2012-001020","is_oa":true,"landing_page_url":"https://doi.org/10.1136/amiajnl-2012-001020","pdf_url":"https://academic.oup.com/jamia/article-pdf/20/1/77/17375119/20-1-77.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education","score":0.6299999952316284}],"awards":[],"funders":[{"id":"https://openalex.org/F4320310050","display_name":"University of Utah","ror":"https://ror.org/03r0ha626"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2158645702.pdf","grobid_xml":"https://content.openalex.org/works/W2158645702.grobid-xml"},"referenced_works_count":34,"referenced_works":["https://openalex.org/W17388479","https://openalex.org/W50158085","https://openalex.org/W1863940422","https://openalex.org/W1995228216","https://openalex.org/W2012466471","https://openalex.org/W2015620729","https://openalex.org/W2065784179","https://openalex.org/W2068882115","https://openalex.org/W2069870853","https://openalex.org/W2096765155","https://openalex.org/W2101135401","https://openalex.org/W2118585731","https://openalex.org/W2128004504","https://openalex.org/W2133362931","https://openalex.org/W2137377614","https://openalex.org/W2140663467","https://openalex.org/W2144578941","https://openalex.org/W2146089916","https://openalex.org/W2153635508","https://openalex.org/W2156061936","https://openalex.org/W2160987310","https://openalex.org/W2161880183","https://openalex.org/W2407338347","https://openalex.org/W2469172133","https://openalex.org/W2553981235","https://openalex.org/W2797707702","https://openalex.org/W2913539360","https://openalex.org/W2952087486","https://openalex.org/W4213212078","https://openalex.org/W4230722969","https://openalex.org/W4234664880","https://openalex.org/W6600705320","https://openalex.org/W6674298926","https://openalex.org/W6677656871"],"related_works":["https://openalex.org/W3183948672","https://openalex.org/W3110381201","https://openalex.org/W2778153218","https://openalex.org/W1531601525","https://openalex.org/W34655408","https://openalex.org/W108038094","https://openalex.org/W2071764545","https://openalex.org/W2968614622","https://openalex.org/W3122341437","https://openalex.org/W2946084070"],"abstract_inverted_index":{"OBJECTIVE:":[0],"De-identification":[1],"allows":[2],"faster":[3],"and":[4,118,166,210,226,233],"more":[5],"collaborative":[6],"clinical":[7,49,91,130,148,223,241],"research":[8,34],"while":[9,238],"protecting":[10],"patient":[11,106,236],"confidentiality.":[12],"Clinical":[13],"narrative":[14],"de-identification":[15,42,83,93,157,179],"is":[16,35,74],"a":[17,56,77,124,139,144,211],"tedious":[18],"process":[19],"that":[20],"can":[21],"be":[22],"alleviated":[23],"by":[24,108],"automated":[25,40,90],"natural":[26],"language":[27],"processing":[28],"methods.":[29],"The":[30,71],"goal":[31],"of":[32,38,143,146,193,214],"this":[33],"the":[36,64,81,98,154,164,194],"development":[37],"an":[39,176],"text":[41,69,92,178],"system":[43,73,94,180,219],"for":[44,68,85,171,206],"Veterans":[45],"Health":[46],"Administration":[47],"(VHA)":[48],"documents.":[50,87],"MATERIALS":[51],"AND":[52],"METHODS:":[53],"We":[54,135,160],"devised":[55],"novel":[57],"stepwise":[58,229],"hybrid":[59,228],"approach":[60],"designed":[61],"to":[62],"improve":[63],"current":[65],"strategies":[66],"used":[67],"de-identification.":[70],"proposed":[72],"based":[75],"on":[76,80],"previous":[78],"study":[79],"best":[82],"methods":[84,195],"VHA":[86,147,222],"This":[88],"best-of-breed":[89],"(aka":[95],"BoB)":[96],"tackles":[97],"problem":[99],"as":[100,110,116,128,132,150,152],"two":[101],"separate":[102],"tasks:":[103],"(1)":[104],"maximize":[105],"confidentiality":[107,237],"redacting":[109],"much":[111,129],"protected":[112],"health":[113],"information":[114,131,242],"(PHI)":[115],"possible;":[117],"(2)":[119],"leave":[120],"de-identified":[121],"documents":[122],"in":[123,184,197,201],"usable":[125],"state":[126],"preserving":[127],"possible.":[133],"RESULTS:":[134],"evaluated":[136],"BoB":[137],"with":[138,153,168],"manually":[140],"annotated":[141],"corpus":[142],"variety":[145],"notes,":[149],"well":[151],"2006":[155],"i2b2":[156],"challenge":[158],"corpus.":[159],"present":[161],"evaluations":[162],"at":[163],"instance-":[165],"token-level,":[167],"detailed":[169],"results":[170],"BoB's":[172,188],"main":[173],"components.":[174],"Moreover,":[175],"existing":[177],"was":[181],"also":[182],"included":[183],"our":[185],"evaluation.":[186],"DISCUSSION:":[187],"design":[189,230],"efficiently":[190],"takes":[191],"advantage":[192],"implemented":[196],"its":[198,227],"pipeline,":[199],"resulting":[200],"high":[202],"sensitivity":[203],"values":[204],"(especially":[205],"sensitive":[207],"PHI":[208],"categories)":[209],"limited":[212],"number":[213],"false":[215],"positives.":[216],"CONCLUSIONS:":[217],"Our":[218],"successfully":[220],"addressed":[221],"document":[224],"de-identification,":[225],"demonstrates":[231],"robustness":[232],"efficiency,":[234],"prioritizing":[235],"leaving":[239],"most":[240],"intact.":[243]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":8},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":5},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":4},{"year":2018,"cited_by_count":5},{"year":2017,"cited_by_count":5},{"year":2016,"cited_by_count":8},{"year":2015,"cited_by_count":12},{"year":2014,"cited_by_count":9},{"year":2013,"cited_by_count":6},{"year":2012,"cited_by_count":1}],"updated_date":"2026-04-29T09:16:38.111599","created_date":"2025-10-10T00:00:00"}
