{"id":"https://openalex.org/W2136505903","doi":"https://doi.org/10.1136/amiajnl-2012-000972","title":"Scientific research in the age of omics: the good, the bad, and the sloppy","display_name":"Scientific research in the age of omics: the good, the bad, and the sloppy","publication_year":2012,"publication_date":"2012-10-04","ids":{"openalex":"https://openalex.org/W2136505903","doi":"https://doi.org/10.1136/amiajnl-2012-000972","mag":"2136505903","pmid":"https://pubmed.ncbi.nlm.nih.gov/23037799"},"language":"en","primary_location":{"id":"doi:10.1136/amiajnl-2012-000972","is_oa":true,"landing_page_url":"https://doi.org/10.1136/amiajnl-2012-000972","pdf_url":"https://academic.oup.com/jamia/article-pdf/20/1/125/9517012/20-1-125.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/jamia/article-pdf/20/1/125/9517012/20-1-125.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5031682567","display_name":"Daniela Witten","orcid":"https://orcid.org/0000-0002-1764-1184"},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"D. M. Witten","raw_affiliation_strings":["Department of Biostatistics, University of Washington, Seattle, Washington, USA. dwitten@u.washington.edu","Department of Biostatistics, University of Washington, Seattle,                         Washington, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biostatistics, University of Washington, Seattle, Washington, USA. dwitten@u.washington.edu","institution_ids":["https://openalex.org/I201448701"]},{"raw_affiliation_string":"Department of Biostatistics, University of Washington, Seattle,                         Washington, USA","institution_ids":["https://openalex.org/I201448701"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5027340494","display_name":"Robert Tibshirani","orcid":"https://orcid.org/0000-0003-0553-5090"},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"R. Tibshirani","raw_affiliation_strings":["Department of Statistics, Stanford University, Stanford, California, USA","Department of Statistics , Stanford University , Stanford , California , USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Statistics, Stanford University, Stanford, California, USA","institution_ids":["https://openalex.org/I97018004"]},{"raw_affiliation_string":"Department of Statistics , Stanford University , Stanford , California , USA","institution_ids":["https://openalex.org/I97018004"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5031682567"],"corresponding_institution_ids":["https://openalex.org/I201448701"],"apc_list":{"value":4332,"currency":"USD","value_usd":4332},"apc_paid":{"value":4332,"currency":"USD","value_usd":4332},"fwci":3.6404,"has_fulltext":true,"cited_by_count":21,"citation_normalized_percentile":{"value":0.9405416,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"20","issue":"1","first_page":"125","last_page":"127"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10206","display_name":"Meta-analysis and systematic reviews","score":0.991599977016449,"subfield":{"id":"https://openalex.org/subfields/1804","display_name":"Statistics, Probability and Uncertainty"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T10206","display_name":"Meta-analysis and systematic reviews","score":0.991599977016449,"subfield":{"id":"https://openalex.org/subfields/1804","display_name":"Statistics, Probability and Uncertainty"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T14393","display_name":"Health, Environment, Cognitive Aging","score":0.9710000157356262,"subfield":{"id":"https://openalex.org/subfields/2307","display_name":"Health, Toxicology and Mutagenesis"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9677000045776367,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/credibility","display_name":"Credibility","score":0.774267852306366},{"id":"https://openalex.org/keywords/taxpayer","display_name":"Taxpayer","score":0.675061047077179},{"id":"https://openalex.org/keywords/accountability","display_name":"Accountability","score":0.6167744398117065},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.6069772243499756},{"id":"https://openalex.org/keywords/open-science","display_name":"Open science","score":0.5055420398712158},{"id":"https://openalex.org/keywords/omics","display_name":"Omics","score":0.5033769011497498},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4930422008037567},{"id":"https://openalex.org/keywords/field","display_name":"Field (mathematics)","score":0.4846342206001282},{"id":"https://openalex.org/keywords/citizen-science","display_name":"Citizen science","score":0.46301576495170593},{"id":"https://openalex.org/keywords/scale","display_name":"Scale (ratio)","score":0.4462241530418396},{"id":"https://openalex.org/keywords/quality","display_name":"Quality (philosophy)","score":0.4193307161331177},{"id":"https://openalex.org/keywords/internet-privacy","display_name":"Internet privacy","score":0.4125470519065857},{"id":"https://openalex.org/keywords/political-science","display_name":"Political science","score":0.24016931653022766},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.16498136520385742},{"id":"https://openalex.org/keywords/law","display_name":"Law","score":0.10926979780197144},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.09575390815734863}],"concepts":[{"id":"https://openalex.org/C2780224610","wikidata":"https://www.wikidata.org/wiki/Q1530061","display_name":"Credibility","level":2,"score":0.774267852306366},{"id":"https://openalex.org/C2776360696","wikidata":"https://www.wikidata.org/wiki/Q1938414","display_name":"Taxpayer","level":2,"score":0.675061047077179},{"id":"https://openalex.org/C2776007630","wikidata":"https://www.wikidata.org/wiki/Q2798912","display_name":"Accountability","level":2,"score":0.6167744398117065},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.6069772243499756},{"id":"https://openalex.org/C2778149293","wikidata":"https://www.wikidata.org/wiki/Q309823","display_name":"Open science","level":2,"score":0.5055420398712158},{"id":"https://openalex.org/C157585117","wikidata":"https://www.wikidata.org/wiki/Q158666","display_name":"Omics","level":2,"score":0.5033769011497498},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4930422008037567},{"id":"https://openalex.org/C9652623","wikidata":"https://www.wikidata.org/wiki/Q190109","display_name":"Field (mathematics)","level":2,"score":0.4846342206001282},{"id":"https://openalex.org/C197352329","wikidata":"https://www.wikidata.org/wiki/Q1093434","display_name":"Citizen science","level":2,"score":0.46301576495170593},{"id":"https://openalex.org/C2778755073","wikidata":"https://www.wikidata.org/wiki/Q10858537","display_name":"Scale (ratio)","level":2,"score":0.4462241530418396},{"id":"https://openalex.org/C2779530757","wikidata":"https://www.wikidata.org/wiki/Q1207505","display_name":"Quality (philosophy)","level":2,"score":0.4193307161331177},{"id":"https://openalex.org/C108827166","wikidata":"https://www.wikidata.org/wiki/Q175975","display_name":"Internet privacy","level":1,"score":0.4125470519065857},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.24016931653022766},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.16498136520385742},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.10926979780197144},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.09575390815734863},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C1276947","wikidata":"https://www.wikidata.org/wiki/Q333","display_name":"Astronomy","level":1,"score":0.0},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012941","descriptor_name":"Social Responsibility","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012941","descriptor_name":"Social Responsibility","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012941","descriptor_name":"Social Responsibility","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017146","descriptor_name":"Models, Organizational","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017146","descriptor_name":"Models, Organizational","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017146","descriptor_name":"Models, Organizational","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017712","descriptor_name":"Peer Review, Research","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017712","descriptor_name":"Peer Review, Research","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017712","descriptor_name":"Peer Review, Research","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D022126","descriptor_name":"Access to Information","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D022126","descriptor_name":"Access to Information","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D022126","descriptor_name":"Access to Information","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D035843","descriptor_name":"Biomedical Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D035843","descriptor_name":"Biomedical Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D035843","descriptor_name":"Biomedical Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058996","descriptor_name":"Quality Improvement","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058996","descriptor_name":"Quality Improvement","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058996","descriptor_name":"Quality Improvement","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1136/amiajnl-2012-000972","is_oa":true,"landing_page_url":"https://doi.org/10.1136/amiajnl-2012-000972","pdf_url":"https://academic.oup.com/jamia/article-pdf/20/1/125/9517012/20-1-125.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},{"id":"pmid:23037799","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/23037799","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association : JAMIA","raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:3555320","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3555320","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Am Med Inform Assoc","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1136/amiajnl-2012-000972","is_oa":true,"landing_page_url":"https://doi.org/10.1136/amiajnl-2012-000972","pdf_url":"https://academic.oup.com/jamia/article-pdf/20/1/125/9517012/20-1-125.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2136505903.pdf","grobid_xml":"https://content.openalex.org/works/W2136505903.grobid-xml"},"referenced_works_count":18,"referenced_works":["https://openalex.org/W59797000","https://openalex.org/W1979916898","https://openalex.org/W1981127147","https://openalex.org/W1985923121","https://openalex.org/W1995054497","https://openalex.org/W2008985174","https://openalex.org/W2029888151","https://openalex.org/W2083042078","https://openalex.org/W2134736660","https://openalex.org/W2142796008","https://openalex.org/W2144907278","https://openalex.org/W2144981148","https://openalex.org/W2150392051","https://openalex.org/W2164839434","https://openalex.org/W2169328938","https://openalex.org/W2268004891","https://openalex.org/W2331384579","https://openalex.org/W2415579990"],"related_works":["https://openalex.org/W4382657178","https://openalex.org/W3173749716","https://openalex.org/W3209138272","https://openalex.org/W4308539276","https://openalex.org/W2969777567","https://openalex.org/W4237979575","https://openalex.org/W4389214414","https://openalex.org/W2936470004","https://openalex.org/W4317734411","https://openalex.org/W3127743177"],"abstract_inverted_index":{"It":[0],"has":[1],"been":[2],"claimed":[3],"that":[4,14,52,91],"most":[5],"research":[6,50,103],"findings":[7],"are":[8,20],"false,":[9],"and":[10,28,44,71,104],"it":[11],"is":[12,32,53],"known":[13],"large-scale":[15],"studies":[16],"involving":[17],"omics":[18],"data":[19],"especially":[21],"prone":[22],"to":[23,56,76,109],"errors":[24],"in":[25,68],"design,":[26],"execution,":[27],"analysis.":[29],"The":[30],"situation":[31],"alarming":[33],"because":[34,45],"taxpayer":[35],"dollars":[36],"fund":[37],"a":[38,49,69],"substantial":[39],"amount":[40],"of":[41,48,63,83,96,101,107],"biomedical":[42],"research,":[43],"the":[46,61,81,94,99,105],"publication":[47],"article":[51],"later":[54],"determined":[55],"be":[57],"flawed":[58],"can":[59],"erode":[60],"credibility":[62],"an":[64,84],"entire":[65],"field,":[66],"resulting":[67],"severe":[70],"negative":[72],"impact":[73],"for":[74,98],"years":[75],"come.":[77],"Here,":[78],"we":[79],"urge":[80],"development":[82],"online,":[85],"open-access,":[86],"postpublication,":[87],"peer":[88],"review":[89],"system":[90],"will":[92],"increase":[93],"accountability":[95],"scientists":[97],"quality":[100],"their":[102],"ability":[106],"readers":[108],"distinguish":[110],"good":[111],"from":[112],"sloppy":[113],"science.":[114]},"counts_by_year":[{"year":2023,"cited_by_count":2},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":3},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":5},{"year":2014,"cited_by_count":4},{"year":2013,"cited_by_count":3}],"updated_date":"2026-08-21T09:56:20.448147","created_date":"2025-10-10T00:00:00"}
