{"id":"https://openalex.org/W2183538607","doi":"https://doi.org/10.1136/amiajnl-2012-000881","title":"Vaccine adverse event text mining system for extracting features from vaccine safety reports","display_name":"Vaccine adverse event text mining system for extracting features from vaccine safety reports","publication_year":2012,"publication_date":"2012-08-26","ids":{"openalex":"https://openalex.org/W2183538607","doi":"https://doi.org/10.1136/amiajnl-2012-000881","mag":"2183538607","pmid":"https://pubmed.ncbi.nlm.nih.gov/22922172"},"language":"en","primary_location":{"id":"doi:10.1136/amiajnl-2012-000881","is_oa":true,"landing_page_url":"https://doi.org/10.1136/amiajnl-2012-000881","pdf_url":"https://academic.oup.com/jamia/article-pdf/19/6/1011/17374135/19-6-1011.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/jamia/article-pdf/19/6/1011/17374135/19-6-1011.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5070026501","display_name":"Taxiarchis Botsis","orcid":"https://orcid.org/0000-0001-7848-2570"},"institutions":[{"id":"https://openalex.org/I1318287680","display_name":"Center for Biologics Evaluation and Research","ror":"https://ror.org/02nr3fr97","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1318287680","https://openalex.org/I1320320070"]},{"id":"https://openalex.org/I78037679","display_name":"UiT The Arctic University of Norway","ror":"https://ror.org/00wge5k78","country_code":"NO","type":"education","lineage":["https://openalex.org/I78037679"]}],"countries":["NO","US"],"is_corresponding":true,"raw_author_name":"Taxiarchis Botsis","raw_affiliation_strings":["Center for Biologics Evaluation and Research, Food and Drug Administration, Rockville, Maryland, USA. taxiarchis.botsis@fda.hhs.gov","Department of Computer Science, University of Troms\u00f8, Troms\u00f8, Norway","Center for Biologics Evaluation and Research (CBER), Food and Drug Administration (FDA), Rockville, Maryland, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Biologics Evaluation and Research, Food and Drug Administration, Rockville, Maryland, USA. taxiarchis.botsis@fda.hhs.gov","institution_ids":["https://openalex.org/I1318287680"]},{"raw_affiliation_string":"Department of Computer Science, University of Troms\u00f8, Troms\u00f8, Norway","institution_ids":["https://openalex.org/I78037679"]},{"raw_affiliation_string":"Center for Biologics Evaluation and Research (CBER), Food and Drug Administration (FDA), Rockville, Maryland, USA","institution_ids":["https://openalex.org/I1318287680"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007861896","display_name":"Thomas R. Buttolph","orcid":null},"institutions":[{"id":"https://openalex.org/I1318287680","display_name":"Center for Biologics Evaluation and Research","ror":"https://ror.org/02nr3fr97","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1318287680","https://openalex.org/I1320320070"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Thomas Buttolph","raw_affiliation_strings":["Center for Biologics Evaluation and Research (CBER), Food and Drug Administration (FDA), Rockville, Maryland, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Biologics Evaluation and Research (CBER), Food and Drug Administration (FDA), Rockville, Maryland, USA","institution_ids":["https://openalex.org/I1318287680"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073895565","display_name":"Michael Nguyen","orcid":"https://orcid.org/0000-0002-0530-1908"},"institutions":[{"id":"https://openalex.org/I1318287680","display_name":"Center for Biologics Evaluation and Research","ror":"https://ror.org/02nr3fr97","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1318287680","https://openalex.org/I1320320070"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Michael D Nguyen","raw_affiliation_strings":["Center for Biologics Evaluation and Research (CBER), Food and Drug Administration (FDA), Rockville, Maryland, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Biologics Evaluation and Research (CBER), Food and Drug Administration (FDA), Rockville, Maryland, USA","institution_ids":["https://openalex.org/I1318287680"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017904795","display_name":"Scott K. Winiecki","orcid":"https://orcid.org/0000-0003-4912-4621"},"institutions":[{"id":"https://openalex.org/I1318287680","display_name":"Center for Biologics Evaluation and Research","ror":"https://ror.org/02nr3fr97","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1318287680","https://openalex.org/I1320320070"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Scott Winiecki","raw_affiliation_strings":["Center for Biologics Evaluation and Research (CBER), Food and Drug Administration (FDA), Rockville, Maryland, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Biologics Evaluation and Research (CBER), Food and Drug Administration (FDA), Rockville, Maryland, USA","institution_ids":["https://openalex.org/I1318287680"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013669823","display_name":"Emily Jane Woo","orcid":"https://orcid.org/0000-0001-9540-1816"},"institutions":[{"id":"https://openalex.org/I1318287680","display_name":"Center for Biologics Evaluation and Research","ror":"https://ror.org/02nr3fr97","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1318287680","https://openalex.org/I1320320070"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Emily Jane Woo","raw_affiliation_strings":["Center for Biologics Evaluation and Research (CBER), Food and Drug Administration (FDA), Rockville, Maryland, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Biologics Evaluation and Research (CBER), Food and Drug Administration (FDA), Rockville, Maryland, USA","institution_ids":["https://openalex.org/I1318287680"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5036429950","display_name":"Robert Ball","orcid":"https://orcid.org/0000-0002-1609-7420"},"institutions":[{"id":"https://openalex.org/I1318287680","display_name":"Center for Biologics Evaluation and Research","ror":"https://ror.org/02nr3fr97","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1318287680","https://openalex.org/I1320320070"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Robert Ball","raw_affiliation_strings":["Center for Biologics Evaluation and Research (CBER), Food and Drug Administration (FDA), Rockville, Maryland, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Biologics Evaluation and Research (CBER), Food and Drug Administration (FDA), Rockville, Maryland, USA","institution_ids":["https://openalex.org/I1318287680"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5070026501"],"corresponding_institution_ids":["https://openalex.org/I1318287680","https://openalex.org/I78037679"],"apc_list":{"value":3967,"currency":"USD","value_usd":3967},"apc_paid":null,"fwci":2.019,"has_fulltext":false,"cited_by_count":47,"citation_normalized_percentile":{"value":0.84958949,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"19","issue":"6","first_page":"1011","last_page":"1018"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11943","display_name":"Pharmacovigilance and Adverse Drug Reactions","score":0.48489999771118164,"subfield":{"id":"https://openalex.org/subfields/3005","display_name":"Toxicology"},"field":{"id":"https://openalex.org/fields/30","display_name":"Pharmacology, Toxicology and Pharmaceutics"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11943","display_name":"Pharmacovigilance and Adverse Drug Reactions","score":0.48489999771118164,"subfield":{"id":"https://openalex.org/subfields/3005","display_name":"Toxicology"},"field":{"id":"https://openalex.org/fields/30","display_name":"Pharmacology, Toxicology and Pharmaceutics"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.3896999955177307,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11117","display_name":"Drug-Induced Adverse Reactions","score":0.00930000003427267,"subfield":{"id":"https://openalex.org/subfields/2736","display_name":"Pharmacology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/adverse-event-reporting-system","display_name":"Adverse Event Reporting System","score":0.6779133081436157},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6400483250617981},{"id":"https://openalex.org/keywords/classifier","display_name":"Classifier (UML)","score":0.5633249282836914},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4862028956413269},{"id":"https://openalex.org/keywords/precision-and-recall","display_name":"Precision and recall","score":0.44806045293807983},{"id":"https://openalex.org/keywords/support-vector-machine","display_name":"Support vector machine","score":0.4397001266479492},{"id":"https://openalex.org/keywords/information-extraction","display_name":"Information extraction","score":0.43382614850997925},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.432117223739624},{"id":"https://openalex.org/keywords/f1-score","display_name":"F1 score","score":0.42100241780281067},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.40638843178749084},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.37296050786972046},{"id":"https://openalex.org/keywords/adverse-effect","display_name":"Adverse effect","score":0.3191404342651367},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.308582603931427},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.0948355495929718}],"concepts":[{"id":"https://openalex.org/C2777105317","wikidata":"https://www.wikidata.org/wiki/Q4686710","display_name":"Adverse Event Reporting System","level":3,"score":0.6779133081436157},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6400483250617981},{"id":"https://openalex.org/C95623464","wikidata":"https://www.wikidata.org/wiki/Q1096149","display_name":"Classifier (UML)","level":2,"score":0.5633249282836914},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4862028956413269},{"id":"https://openalex.org/C81669768","wikidata":"https://www.wikidata.org/wiki/Q2359161","display_name":"Precision and recall","level":2,"score":0.44806045293807983},{"id":"https://openalex.org/C12267149","wikidata":"https://www.wikidata.org/wiki/Q282453","display_name":"Support vector machine","level":2,"score":0.4397001266479492},{"id":"https://openalex.org/C195807954","wikidata":"https://www.wikidata.org/wiki/Q1662562","display_name":"Information extraction","level":2,"score":0.43382614850997925},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.432117223739624},{"id":"https://openalex.org/C148524875","wikidata":"https://www.wikidata.org/wiki/Q6975395","display_name":"F1 score","level":2,"score":0.42100241780281067},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.40638843178749084},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.37296050786972046},{"id":"https://openalex.org/C197934379","wikidata":"https://www.wikidata.org/wiki/Q2047938","display_name":"Adverse effect","level":2,"score":0.3191404342651367},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.308582603931427},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.0948355495929718}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014481","descriptor_name":"United States","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014481","descriptor_name":"United States","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014481","descriptor_name":"United States","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014612","descriptor_name":"Vaccines","qualifier_ui":"Q000009","qualifier_name":"adverse effects","is_major_topic":false},{"descriptor_ui":"D014612","descriptor_name":"Vaccines","qualifier_ui":"Q000009","qualifier_name":"adverse effects","is_major_topic":false},{"descriptor_ui":"D014612","descriptor_name":"Vaccines","qualifier_ui":"Q000009","qualifier_name":"adverse effects","is_major_topic":false},{"descriptor_ui":"D016907","descriptor_name":"Adverse Drug Reaction Reporting Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016907","descriptor_name":"Adverse Drug Reaction Reporting Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016907","descriptor_name":"Adverse Drug Reaction Reporting Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1136/amiajnl-2012-000881","is_oa":true,"landing_page_url":"https://doi.org/10.1136/amiajnl-2012-000881","pdf_url":"https://academic.oup.com/jamia/article-pdf/19/6/1011/17374135/19-6-1011.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},{"id":"pmid:22922172","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22922172","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association : JAMIA","raw_type":null},{"id":"pmh:oai:europepmc.org:2809478","is_oa":false,"landing_page_url":"http://europepmc.org/articles/PMC3534466","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:3534466","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3534466","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Am Med Inform Assoc","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1136/amiajnl-2012-000881","is_oa":true,"landing_page_url":"https://doi.org/10.1136/amiajnl-2012-000881","pdf_url":"https://academic.oup.com/jamia/article-pdf/19/6/1011/17374135/19-6-1011.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Good health and well-being","score":0.7799999713897705,"id":"https://metadata.un.org/sdg/3"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":27,"referenced_works":["https://openalex.org/W30586149","https://openalex.org/W635587055","https://openalex.org/W1504212872","https://openalex.org/W1532325895","https://openalex.org/W1568010612","https://openalex.org/W1572321091","https://openalex.org/W1602694398","https://openalex.org/W1637593105","https://openalex.org/W1871067837","https://openalex.org/W1964625659","https://openalex.org/W1983077458","https://openalex.org/W2046085703","https://openalex.org/W2076424959","https://openalex.org/W2078116468","https://openalex.org/W2104752900","https://openalex.org/W2107809009","https://openalex.org/W2114388055","https://openalex.org/W2118020653","https://openalex.org/W2139865360","https://openalex.org/W2144949988","https://openalex.org/W2146089916","https://openalex.org/W2149803936","https://openalex.org/W2153064780","https://openalex.org/W2159636537","https://openalex.org/W2159985898","https://openalex.org/W2166213950","https://openalex.org/W4213009331"],"related_works":["https://openalex.org/W4387490204","https://openalex.org/W2004087619","https://openalex.org/W4321472216","https://openalex.org/W2557094866","https://openalex.org/W2469016277","https://openalex.org/W2362196274","https://openalex.org/W2757101400","https://openalex.org/W1982302668","https://openalex.org/W4386414453","https://openalex.org/W4388937883"],"abstract_inverted_index":{"OBJECTIVE:":[0],"To":[1],"develop":[2],"and":[3,46,50,122,133,149,158,161,186,200,216,224,245],"evaluate":[4],"a":[5,59,70,82,118,129,154,235],"text":[6,64,72,131,144,221,237],"mining":[7,65,73,145,238],"system":[8,19,67],"for":[9,55,111,163],"extracting":[10,179],"key":[11,249],"clinical":[12,35],"features":[13,52,189,250],"from":[14,251],"vaccine":[15,61],"adverse":[16,29,62],"event":[17,30,63],"reporting":[18],"(VAERS)":[20],"narratives":[21],"to":[22,37,102,219],"aid":[23],"in":[24,88,117,178,192,242],"the":[25,43,99,112,170,193,220,225],"automated":[26],"review":[27],"of":[28,48,77,84,92,114,120,141,165,205,234,248],"reports.":[31],"DESIGN:":[32],"Based":[33],"upon":[34],"significance":[36],"VAERS":[38,86,252],"reviewing":[39],"physicians,":[40],"we":[41,97],"defined":[42],"primary":[44],"(diagnosis":[45],"cause":[47],"death)":[49],"secondary":[51],"(eg,":[53],"symptoms)":[54],"extraction.":[56],"We":[57,151],"built":[58],"novel":[60],"(VaeTM)":[66],"based":[68,168],"on":[69,169],"semantic":[71,236],"strategy.":[74],"The":[75,138],"performance":[76,139],"VaeTM":[78,100,142,175,232],"was":[79,109,123,210,214],"evaluated":[80,98],"using":[81],"total":[83],"300":[85],"reports":[87,94,121],"three":[89,172],"sequential":[90],"evaluations":[91],"100":[93],"each.":[95],"Moreover,":[96],"contribution":[101],"case":[103,206],"classification;":[104],"an":[105,134],"information":[106],"retrieval-based":[107],"approach":[108],"used":[110],"identification":[113],"anaphylaxis":[115,166],"cases":[116,167],"set":[119],"compared":[124,218],"with":[125],"two":[126],"other":[127],"methods:":[128],"dedicated":[130],"classifier":[132,222],"online":[135,226],"tool.":[136],"MEASUREMENTS:":[137],"metrics":[140],"were":[143],"metrics:":[146],"recall,":[147],"precision":[148],"F-measure.":[150],"also":[152],"conducted":[153],"qualitative":[155],"difference":[156],"analysis":[157],"calculated":[159],"sensitivity":[160,209],"specificity":[162],"classification":[164],"above":[171],"approaches.":[173],"RESULTS:":[174],"performed":[176],"best":[177],"diagnosis,":[180,183],"second":[181],"level":[182],"drug,":[184],"vaccine,":[185],"lot":[187],"number":[188],"(lenient":[190],"F-measure":[191],"third":[194],"evaluation:":[195],"0.897,":[196],"0.817,":[197],"0.858,":[198],"0.874,":[199],"0.914,":[201],"respectively).":[202],"In":[203],"terms":[204],"classification,":[207],"high":[208],"achieved":[211],"(83.1%);":[212],"this":[213],"equal":[215],"better":[217],"(83.1%)":[223],"tool":[227],"(40.7%),":[228],"respectively.":[229],"CONCLUSION:":[230],"Our":[231],"implementation":[233],"strategy":[239],"shows":[240],"promise":[241],"providing":[243],"accurate":[244],"efficient":[246],"extraction":[247],"narratives.":[253]},"counts_by_year":[{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":5},{"year":2021,"cited_by_count":6},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":5},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":4},{"year":2016,"cited_by_count":4},{"year":2015,"cited_by_count":4},{"year":2014,"cited_by_count":3},{"year":2013,"cited_by_count":3},{"year":2012,"cited_by_count":2}],"updated_date":"2026-05-19T21:40:30.786675","created_date":"2025-10-10T00:00:00"}