{"id":"https://openalex.org/W47079112","doi":"https://doi.org/10.1136/amiajnl-2011-000503","title":"Usability-driven pruning of large ontologies: the case of SNOMED CT","display_name":"Usability-driven pruning of large ontologies: the case of SNOMED CT","publication_year":2012,"publication_date":"2012-01-19","ids":{"openalex":"https://openalex.org/W47079112","doi":"https://doi.org/10.1136/amiajnl-2011-000503","mag":"47079112","pmid":"https://pubmed.ncbi.nlm.nih.gov/22268217"},"language":"en","primary_location":{"id":"doi:10.1136/amiajnl-2011-000503","is_oa":true,"landing_page_url":"https://doi.org/10.1136/amiajnl-2011-000503","pdf_url":"https://academic.oup.com/jamia/article-pdf/19/e1/e102/17374188/19-e1-e102.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/jamia/article-pdf/19/e1/e102/17374188/19-e1-e102.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5091381316","display_name":"Pablo L\u00f3pez-Garc\u00eda","orcid":"https://orcid.org/0000-0001-5419-7337"},"institutions":[{"id":"https://openalex.org/I169108374","display_name":"University of the Basque Country","ror":"https://ror.org/000xsnr85","country_code":"ES","type":"education","lineage":["https://openalex.org/I169108374"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Pablo L\u00f3pez-Garc\u00eda","raw_affiliation_strings":["Departamento de Lenguajes y Sistemas Inform\u00e1ticos, Universidad del Pa\u00eds Vasco, Donostia-San Sebasti\u00e1n, Spain. pablo.lopez@ehu.es","Departamento de Lenguajes y Sistemas Inform\u00e1ticos, Universidad del Pa\u00eds Vasco, Donostia-San Sebasti\u00e1n, Spain"],"affiliations":[{"raw_affiliation_string":"Departamento de Lenguajes y Sistemas Inform\u00e1ticos, Universidad del Pa\u00eds Vasco, Donostia-San Sebasti\u00e1n, Spain. pablo.lopez@ehu.es","institution_ids":["https://openalex.org/I169108374"]},{"raw_affiliation_string":"Departamento de Lenguajes y Sistemas Inform\u00e1ticos, Universidad del Pa\u00eds Vasco, Donostia-San Sebasti\u00e1n, Spain","institution_ids":["https://openalex.org/I169108374"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039035898","display_name":"Martin Boeker","orcid":"https://orcid.org/0000-0003-2972-2042"},"institutions":[{"id":"https://openalex.org/I161046081","display_name":"University of Freiburg","ror":"https://ror.org/0245cg223","country_code":"DE","type":"education","lineage":["https://openalex.org/I161046081"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Martin Boeker","raw_affiliation_strings":["Institut f\u00fcr Medizinische Biometrie und Medizinische Informatik, Albert-Ludwigs-Universit\u00e4t Freiburg, Freiburg, Germany"],"affiliations":[{"raw_affiliation_string":"Institut f\u00fcr Medizinische Biometrie und Medizinische Informatik, Albert-Ludwigs-Universit\u00e4t Freiburg, Freiburg, Germany","institution_ids":["https://openalex.org/I161046081"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013396377","display_name":"Arantza Illarramendi","orcid":"https://orcid.org/0000-0001-9567-6326"},"institutions":[{"id":"https://openalex.org/I169108374","display_name":"University of the Basque Country","ror":"https://ror.org/000xsnr85","country_code":"ES","type":"education","lineage":["https://openalex.org/I169108374"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Arantza Illarramendi","raw_affiliation_strings":["Departamento de Lenguajes y Sistemas Inform\u00e1ticos, Universidad del Pa\u00eds Vasco, Donostia-San Sebasti\u00e1n, Spain"],"affiliations":[{"raw_affiliation_string":"Departamento de Lenguajes y Sistemas Inform\u00e1ticos, Universidad del Pa\u00eds Vasco, Donostia-San Sebasti\u00e1n, Spain","institution_ids":["https://openalex.org/I169108374"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5101773732","display_name":"Stefan Schulz","orcid":"https://orcid.org/0000-0001-7222-3287"},"institutions":[{"id":"https://openalex.org/I161046081","display_name":"University of Freiburg","ror":"https://ror.org/0245cg223","country_code":"DE","type":"education","lineage":["https://openalex.org/I161046081"]},{"id":"https://openalex.org/I202276237","display_name":"Medical University of Graz","ror":"https://ror.org/02n0bts35","country_code":"AT","type":"education","lineage":["https://openalex.org/I202276237"]}],"countries":["AT","DE"],"is_corresponding":false,"raw_author_name":"Stefan Schulz","raw_affiliation_strings":["Institut f\u00fcr Medizinische Biometrie und Medizinische Informatik, Albert-Ludwigs-Universit\u00e4t Freiburg, Freiburg, Germany","Institut f\u00fcr Medizinische Informatik, Statistik und Dokumentation, Medizinische Universit\u00e4t Graz, Graz, Austria"],"affiliations":[{"raw_affiliation_string":"Institut f\u00fcr Medizinische Biometrie und Medizinische Informatik, Albert-Ludwigs-Universit\u00e4t Freiburg, Freiburg, Germany","institution_ids":["https://openalex.org/I161046081"]},{"raw_affiliation_string":"Institut f\u00fcr Medizinische Informatik, Statistik und Dokumentation, Medizinische Universit\u00e4t Graz, Graz, Austria","institution_ids":["https://openalex.org/I202276237"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5091381316"],"corresponding_institution_ids":["https://openalex.org/I169108374"],"apc_list":{"value":3967,"currency":"USD","value_usd":3967},"apc_paid":null,"fwci":1.0736,"has_fulltext":false,"cited_by_count":13,"citation_normalized_percentile":{"value":0.74806183,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"19","issue":"e1","first_page":"e102","last_page":"e109"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11719","display_name":"Data Quality and Management","score":0.9527999758720398,"subfield":{"id":"https://openalex.org/subfields/1803","display_name":"Management Science and Operations Research"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/snomed-ct","display_name":"SNOMED CT","score":0.8238177299499512},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7598735094070435},{"id":"https://openalex.org/keywords/heuristics","display_name":"Heuristics","score":0.6899349093437195},{"id":"https://openalex.org/keywords/tree-traversal","display_name":"Tree traversal","score":0.572066605091095},{"id":"https://openalex.org/keywords/graph-traversal","display_name":"Graph traversal","score":0.49685171246528625},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.44921165704727173},{"id":"https://openalex.org/keywords/usability","display_name":"Usability","score":0.4389254152774811},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.43311935663223267},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.4288065433502197},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.41133347153663635},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3514668941497803},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.2679881155490875},{"id":"https://openalex.org/keywords/terminology","display_name":"Terminology","score":0.19134598970413208},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.17203879356384277}],"concepts":[{"id":"https://openalex.org/C206497026","wikidata":"https://www.wikidata.org/wiki/Q1753883","display_name":"SNOMED CT","level":3,"score":0.8238177299499512},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7598735094070435},{"id":"https://openalex.org/C127705205","wikidata":"https://www.wikidata.org/wiki/Q5748245","display_name":"Heuristics","level":2,"score":0.6899349093437195},{"id":"https://openalex.org/C140745168","wikidata":"https://www.wikidata.org/wiki/Q1210082","display_name":"Tree traversal","level":2,"score":0.572066605091095},{"id":"https://openalex.org/C96333769","wikidata":"https://www.wikidata.org/wiki/Q907955","display_name":"Graph traversal","level":3,"score":0.49685171246528625},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.44921165704727173},{"id":"https://openalex.org/C170130773","wikidata":"https://www.wikidata.org/wiki/Q216378","display_name":"Usability","level":2,"score":0.4389254152774811},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.43311935663223267},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.4288065433502197},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.41133347153663635},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3514668941497803},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.2679881155490875},{"id":"https://openalex.org/C547195049","wikidata":"https://www.wikidata.org/wiki/Q1725664","display_name":"Terminology","level":2,"score":0.19134598970413208},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.17203879356384277},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C107457646","wikidata":"https://www.wikidata.org/wiki/Q207434","display_name":"Human\u2013computer interaction","level":1,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D002309","descriptor_name":"Cardiology","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D002309","descriptor_name":"Cardiology","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D002309","descriptor_name":"Cardiology","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010351","descriptor_name":"Patient Discharge","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010351","descriptor_name":"Patient Discharge","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010351","descriptor_name":"Patient Discharge","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016239","descriptor_name":"MEDLINE","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016239","descriptor_name":"MEDLINE","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016239","descriptor_name":"MEDLINE","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D039061","descriptor_name":"Systematized Nomenclature of Medicine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D039061","descriptor_name":"Systematized Nomenclature of Medicine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D039061","descriptor_name":"Systematized Nomenclature of Medicine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1136/amiajnl-2011-000503","is_oa":true,"landing_page_url":"https://doi.org/10.1136/amiajnl-2011-000503","pdf_url":"https://academic.oup.com/jamia/article-pdf/19/e1/e102/17374188/19-e1-e102.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},{"id":"pmid:22268217","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22268217","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association : JAMIA","raw_type":null},{"id":"pmh:oai:europepmc.org:2665696","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3392868","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1136/amiajnl-2011-000503","is_oa":true,"landing_page_url":"https://doi.org/10.1136/amiajnl-2011-000503","pdf_url":"https://academic.oup.com/jamia/article-pdf/19/e1/e102/17374188/19-e1-e102.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320322177","display_name":"Hospital de Cl\u00ednicas de Porto Alegre","ror":"https://ror.org/010we4y38"},{"id":"https://openalex.org/F4320322930","display_name":"Ministerio de Ciencia e Innovaci\u00f3n","ror":"https://ror.org/034900433"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W47079112.pdf","grobid_xml":"https://content.openalex.org/works/W47079112.grobid-xml"},"referenced_works_count":28,"referenced_works":["https://openalex.org/W62327733","https://openalex.org/W91361357","https://openalex.org/W1484429151","https://openalex.org/W1527627804","https://openalex.org/W1542417898","https://openalex.org/W1555563750","https://openalex.org/W1594656587","https://openalex.org/W1605764012","https://openalex.org/W1728953932","https://openalex.org/W1816056598","https://openalex.org/W1995756476","https://openalex.org/W2006082408","https://openalex.org/W2036614464","https://openalex.org/W2065936280","https://openalex.org/W2125029697","https://openalex.org/W2147729309","https://openalex.org/W2157190311","https://openalex.org/W2160522235","https://openalex.org/W2162438644","https://openalex.org/W2166718065","https://openalex.org/W2188041631","https://openalex.org/W2208712810","https://openalex.org/W2483873654","https://openalex.org/W4240806681","https://openalex.org/W4299411015","https://openalex.org/W6602532367","https://openalex.org/W6603660159","https://openalex.org/W6686696656"],"related_works":["https://openalex.org/W2200188075","https://openalex.org/W4252596799","https://openalex.org/W4254594467","https://openalex.org/W4230405657","https://openalex.org/W244044452","https://openalex.org/W2552915643","https://openalex.org/W170547082","https://openalex.org/W3213135344","https://openalex.org/W3183956626","https://openalex.org/W2136735429"],"abstract_inverted_index":{"Graph-traversal":[0],"strategies":[1],"and":[2,14],"frequency":[3],"data":[4],"from":[5],"an":[6],"authoritative":[7],"source":[8],"can":[9],"prune":[10],"large":[11],"biomedical":[12],"ontologies":[13],"produce":[15],"useful":[16],"subsets":[17],"that":[18],"still":[19],"exhibit":[20],"acceptable":[21],"coverage.":[22],"However,":[23],"a":[24],"clinical":[25],"corpus":[26],"closer":[27],"to":[28],"the":[29],"specific":[30],"use":[31],"case":[32],"is":[33],"preferred":[34],"when":[35],"available.":[36]},"counts_by_year":[{"year":2021,"cited_by_count":2},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":4},{"year":2012,"cited_by_count":2}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
