{"id":"https://openalex.org/W1773414592","doi":"https://doi.org/10.1136/amiajnl-2011-000328","title":"2010 Translational bioinformatics year in review","display_name":"2010 Translational bioinformatics year in review","publication_year":2011,"publication_date":"2011-06-14","ids":{"openalex":"https://openalex.org/W1773414592","doi":"https://doi.org/10.1136/amiajnl-2011-000328","mag":"1773414592","pmid":"https://pubmed.ncbi.nlm.nih.gov/21672905"},"language":"en","primary_location":{"id":"doi:10.1136/amiajnl-2011-000328","is_oa":true,"landing_page_url":"https://doi.org/10.1136/amiajnl-2011-000328","pdf_url":"https://academic.oup.com/jamia/article-pdf/18/4/358/5911164/18-4-358.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/jamia/article-pdf/18/4/358/5911164/18-4-358.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5084043782","display_name":"Russ B. Altman","orcid":"https://orcid.org/0000-0003-3859-2905"},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Russ B Altman","raw_affiliation_strings":["Department of Bioengineering, Stanford University School of Medicine, Stanford, California 94305-5444, USA. russ.altman@stanford.edu","Departments of Bioengineering, Genetics and Medicine, Stanford University School of Medicine, Stanford, California, USA"],"affiliations":[{"raw_affiliation_string":"Department of Bioengineering, Stanford University School of Medicine, Stanford, California 94305-5444, USA. russ.altman@stanford.edu","institution_ids":["https://openalex.org/I97018004"]},{"raw_affiliation_string":"Departments of Bioengineering, Genetics and Medicine, Stanford University School of Medicine, Stanford, California, USA","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5103370146","display_name":"Katharine S Miller","orcid":null},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]},{"id":"https://openalex.org/I1743320","display_name":"Palo Alto University","ror":"https://ror.org/04f812k67","country_code":"US","type":"education","lineage":["https://openalex.org/I1743320"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Katharine S Miller","raw_affiliation_strings":["Department of Bioengineering, Stanford University, Palo Alto, California, USA"],"affiliations":[{"raw_affiliation_string":"Department of Bioengineering, Stanford University, Palo Alto, California, USA","institution_ids":["https://openalex.org/I1743320","https://openalex.org/I97018004"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5084043782"],"corresponding_institution_ids":["https://openalex.org/I97018004"],"apc_list":{"value":3967,"currency":"USD","value_usd":3967},"apc_paid":null,"fwci":0.8004,"has_fulltext":true,"cited_by_count":9,"citation_normalized_percentile":{"value":0.70142369,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"18","issue":"4","first_page":"358","last_page":"366"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9921000003814697,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9921000003814697,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12168","display_name":"Health and Medical Research Impacts","score":0.9761000275611877,"subfield":{"id":"https://openalex.org/subfields/2739","display_name":"Public Health, Environmental and Occupational Health"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9675999879837036,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.6086456179618835},{"id":"https://openalex.org/keywords/field","display_name":"Field (mathematics)","score":0.6051199436187744},{"id":"https://openalex.org/keywords/translational-research","display_name":"Translational research","score":0.5835331678390503},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.5022809505462646},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.45793935656547546},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.4323877692222595},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3346518874168396},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.30847233533859253},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2445698082447052},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.149616539478302},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.129613995552063},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.0873873233795166}],"concepts":[{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.6086456179618835},{"id":"https://openalex.org/C9652623","wikidata":"https://www.wikidata.org/wiki/Q190109","display_name":"Field (mathematics)","level":2,"score":0.6051199436187744},{"id":"https://openalex.org/C128544194","wikidata":"https://www.wikidata.org/wiki/Q474859","display_name":"Translational research","level":2,"score":0.5835331678390503},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.5022809505462646},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.45793935656547546},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.4323877692222595},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3346518874168396},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.30847233533859253},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2445698082447052},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.149616539478302},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.129613995552063},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0873873233795166},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008490","descriptor_name":"Medical Informatics","qualifier_ui":"Q000639","qualifier_name":"trends","is_major_topic":false},{"descriptor_ui":"D008490","descriptor_name":"Medical Informatics","qualifier_ui":"Q000639","qualifier_name":"trends","is_major_topic":false},{"descriptor_ui":"D008490","descriptor_name":"Medical Informatics","qualifier_ui":"Q000639","qualifier_name":"trends","is_major_topic":false},{"descriptor_ui":"D017421","descriptor_name":"Sequence Analysis","qualifier_ui":"Q000639","qualifier_name":"trends","is_major_topic":false},{"descriptor_ui":"D017421","descriptor_name":"Sequence Analysis","qualifier_ui":"Q000639","qualifier_name":"trends","is_major_topic":false},{"descriptor_ui":"D017421","descriptor_name":"Sequence Analysis","qualifier_ui":"Q000639","qualifier_name":"trends","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000639","qualifier_name":"trends","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000639","qualifier_name":"trends","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000639","qualifier_name":"trends","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000639","qualifier_name":"trends","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000639","qualifier_name":"trends","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000639","qualifier_name":"trends","is_major_topic":false},{"descriptor_ui":"D057170","descriptor_name":"Translational Research, Biomedical","qualifier_ui":"Q000639","qualifier_name":"trends","is_major_topic":false},{"descriptor_ui":"D057170","descriptor_name":"Translational Research, Biomedical","qualifier_ui":"Q000639","qualifier_name":"trends","is_major_topic":false},{"descriptor_ui":"D057170","descriptor_name":"Translational Research, Biomedical","qualifier_ui":"Q000639","qualifier_name":"trends","is_major_topic":false},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":"Q000639","qualifier_name":"trends","is_major_topic":false},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":"Q000639","qualifier_name":"trends","is_major_topic":false},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":"Q000639","qualifier_name":"trends","is_major_topic":false},{"descriptor_ui":"D058990","descriptor_name":"Molecular Targeted Therapy","qualifier_ui":"Q000639","qualifier_name":"trends","is_major_topic":false},{"descriptor_ui":"D058990","descriptor_name":"Molecular Targeted Therapy","qualifier_ui":"Q000639","qualifier_name":"trends","is_major_topic":false},{"descriptor_ui":"D058990","descriptor_name":"Molecular Targeted Therapy","qualifier_ui":"Q000639","qualifier_name":"trends","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1136/amiajnl-2011-000328","is_oa":true,"landing_page_url":"https://doi.org/10.1136/amiajnl-2011-000328","pdf_url":"https://academic.oup.com/jamia/article-pdf/18/4/358/5911164/18-4-358.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},{"id":"pmid:21672905","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/21672905","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association : JAMIA","raw_type":null},{"id":"pmh:oai:europepmc.org:2142328","is_oa":false,"landing_page_url":"http://europepmc.org/articles/PMC3128418","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:3128418","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3128418","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Am Med Inform Assoc","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1136/amiajnl-2011-000328","is_oa":true,"landing_page_url":"https://doi.org/10.1136/amiajnl-2011-000328","pdf_url":"https://academic.oup.com/jamia/article-pdf/18/4/358/5911164/18-4-358.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.6700000166893005,"id":"https://metadata.un.org/sdg/9","display_name":"Industry, innovation and infrastructure"}],"awards":[{"id":"https://openalex.org/G2221938931","display_name":null,"funder_award_id":"GM61374","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G4406002797","display_name":null,"funder_award_id":"GM072970","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G6058105926","display_name":null,"funder_award_id":"LM05652,","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G6411790401","display_name":null,"funder_award_id":"LM05652","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320308943","display_name":"Microsoft Research","ror":"https://ror.org/00d0nc645"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1773414592.pdf","grobid_xml":"https://content.openalex.org/works/W1773414592.grobid-xml"},"referenced_works_count":57,"referenced_works":["https://openalex.org/W1968667083","https://openalex.org/W1974731249","https://openalex.org/W1984789788","https://openalex.org/W1998713335","https://openalex.org/W1999822725","https://openalex.org/W2000905326","https://openalex.org/W2006454222","https://openalex.org/W2010191214","https://openalex.org/W2010601590","https://openalex.org/W2011980051","https://openalex.org/W2019646180","https://openalex.org/W2019974881","https://openalex.org/W2025576892","https://openalex.org/W2039542842","https://openalex.org/W2041063545","https://openalex.org/W2044826047","https://openalex.org/W2055553707","https://openalex.org/W2059867286","https://openalex.org/W2071422610","https://openalex.org/W2073338313","https://openalex.org/W2074899356","https://openalex.org/W2075292410","https://openalex.org/W2075322787","https://openalex.org/W2077566950","https://openalex.org/W2078202582","https://openalex.org/W2078586457","https://openalex.org/W2087591041","https://openalex.org/W2091727117","https://openalex.org/W2093025056","https://openalex.org/W2094791588","https://openalex.org/W2103184242","https://openalex.org/W2104608657","https://openalex.org/W2107021160","https://openalex.org/W2113105800","https://openalex.org/W2114040365","https://openalex.org/W2114244185","https://openalex.org/W2114482012","https://openalex.org/W2115727081","https://openalex.org/W2116568613","https://openalex.org/W2118415328","https://openalex.org/W2121920862","https://openalex.org/W2122889774","https://openalex.org/W2125826054","https://openalex.org/W2133102806","https://openalex.org/W2135016593","https://openalex.org/W2137512368","https://openalex.org/W2137753965","https://openalex.org/W2138427043","https://openalex.org/W2142572836","https://openalex.org/W2152741971","https://openalex.org/W2155445544","https://openalex.org/W2156522652","https://openalex.org/W2159254098","https://openalex.org/W2161969333","https://openalex.org/W2162632787","https://openalex.org/W2164839434","https://openalex.org/W2167214840"],"related_works":["https://openalex.org/W4310075773","https://openalex.org/W2347127313","https://openalex.org/W2938786841","https://openalex.org/W2560183138","https://openalex.org/W4323018902","https://openalex.org/W30833431","https://openalex.org/W2945230459","https://openalex.org/W2151911051","https://openalex.org/W2149990827","https://openalex.org/W2138097302"],"abstract_inverted_index":{"A":[0],"review":[1],"of":[2,43],"2010":[3],"research":[4],"in":[5,18],"translational":[6],"bioinformatics":[7],"provides":[8],"much":[9],"to":[10,39,47],"marvel":[11],"at.":[12],"We":[13],"have":[14],"seen":[15],"notable":[16],"advances":[17],"personal":[19],"genomics,":[20],"pharmacogenetics,":[21],"and":[22],"sequencing.":[23],"At":[24],"the":[25,28,31,41,51],"same":[26],"time,":[27],"infrastructure":[29],"for":[30],"field":[32,45],"has":[33],"burgeoned.":[34],"While":[35],"acknowledging":[36],"that,":[37],"according":[38],"researchers,":[40],"members":[42],"this":[44],"tend":[46],"be":[48],"overly":[49],"optimistic,":[50],"authors":[52],"predict":[53],"a":[54],"bright":[55],"future.":[56]},"counts_by_year":[{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":2}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}