{"id":"https://openalex.org/W2022444289","doi":"https://doi.org/10.1117/12.911688","title":"Deformable prostate registration from MR and TRUS images using surface error driven FEM models","display_name":"Deformable prostate registration from MR and TRUS images using surface error driven FEM models","publication_year":2012,"publication_date":"2012-01-28","ids":{"openalex":"https://openalex.org/W2022444289","doi":"https://doi.org/10.1117/12.911688","mag":"2022444289"},"language":"en","primary_location":{"id":"doi:10.1117/12.911688","is_oa":false,"landing_page_url":"https://doi.org/10.1117/12.911688","pdf_url":null,"source":{"id":"https://openalex.org/S183492911","display_name":"Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE","issn_l":"0277-786X","issn":["0277-786X","1996-756X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310315543","host_organization_name":"SPIE","host_organization_lineage":["https://openalex.org/P4310315543"],"host_organization_lineage_names":["SPIE"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"SPIE Proceedings","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5019914393","display_name":"Farheen Taquee","orcid":null},"institutions":[{"id":"https://openalex.org/I141945490","display_name":"University of British Columbia","ror":"https://ror.org/03rmrcq20","country_code":"CA","type":"education","lineage":["https://openalex.org/I141945490"]}],"countries":["CA"],"is_corresponding":true,"raw_author_name":"Farheen Taquee","raw_affiliation_strings":["The Univ. of British Columbia (Canada)","the University of British Columbia, Canada"],"affiliations":[{"raw_affiliation_string":"The Univ. of British Columbia (Canada)","institution_ids":["https://openalex.org/I141945490"]},{"raw_affiliation_string":"the University of British Columbia, Canada","institution_ids":["https://openalex.org/I141945490"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016658563","display_name":"Or\u00e7un G\u00f6ksel","orcid":"https://orcid.org/0000-0002-8639-7373"},"institutions":[{"id":"https://openalex.org/I2799323385","display_name":"Board of the Swiss Federal Institutes of Technology","ror":"https://ror.org/01rvn4p91","country_code":"CH","type":"government","lineage":["https://openalex.org/I2799323385"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Orcun Goksel","raw_affiliation_strings":["ETH (Switzerland)"],"affiliations":[{"raw_affiliation_string":"ETH (Switzerland)","institution_ids":["https://openalex.org/I2799323385"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063201022","display_name":"S. Sara Mahdavi","orcid":"https://orcid.org/0000-0001-6823-598X"},"institutions":[{"id":"https://openalex.org/I141945490","display_name":"University of British Columbia","ror":"https://ror.org/03rmrcq20","country_code":"CA","type":"education","lineage":["https://openalex.org/I141945490"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"S. Sara Mahdavi","raw_affiliation_strings":["The Univ. of British Columbia (Canada)","the University of British Columbia, Canada"],"affiliations":[{"raw_affiliation_string":"The Univ. of British Columbia (Canada)","institution_ids":["https://openalex.org/I141945490"]},{"raw_affiliation_string":"the University of British Columbia, Canada","institution_ids":["https://openalex.org/I141945490"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076067044","display_name":"Mira Keyes","orcid":"https://orcid.org/0000-0003-3460-3312"},"institutions":[{"id":"https://openalex.org/I1289530486","display_name":"BC Cancer Agency","ror":"https://ror.org/03sfybe47","country_code":"CA","type":"healthcare","lineage":["https://openalex.org/I1289530486"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Mira Keyes","raw_affiliation_strings":["British Columbia Cancer Agency (Canada)"],"affiliations":[{"raw_affiliation_string":"British Columbia Cancer Agency (Canada)","institution_ids":["https://openalex.org/I1289530486"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101654281","display_name":"William Morris","orcid":"https://orcid.org/0000-0003-4551-5924"},"institutions":[{"id":"https://openalex.org/I1289530486","display_name":"BC Cancer Agency","ror":"https://ror.org/03sfybe47","country_code":"CA","type":"healthcare","lineage":["https://openalex.org/I1289530486"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"W. James Morris","raw_affiliation_strings":["British Columbia Cancer Agency (Canada)"],"affiliations":[{"raw_affiliation_string":"British Columbia Cancer Agency (Canada)","institution_ids":["https://openalex.org/I1289530486"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049350816","display_name":"Ingrid Spadinger","orcid":"https://orcid.org/0000-0002-3647-6858"},"institutions":[{"id":"https://openalex.org/I1289530486","display_name":"BC Cancer Agency","ror":"https://ror.org/03sfybe47","country_code":"CA","type":"healthcare","lineage":["https://openalex.org/I1289530486"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Ingrid Spadinger","raw_affiliation_strings":["British Columbia Cancer Agency (Canada)"],"affiliations":[{"raw_affiliation_string":"British Columbia Cancer Agency (Canada)","institution_ids":["https://openalex.org/I1289530486"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5028375560","display_name":"Septimiu E. Salcudean","orcid":"https://orcid.org/0000-0001-8826-8025"},"institutions":[{"id":"https://openalex.org/I141945490","display_name":"University of British Columbia","ror":"https://ror.org/03rmrcq20","country_code":"CA","type":"education","lineage":["https://openalex.org/I141945490"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Septimiu Salcudean","raw_affiliation_strings":["The Univ. of British Columbia (Canada)","the University of British Columbia, Canada"],"affiliations":[{"raw_affiliation_string":"The Univ. of British Columbia (Canada)","institution_ids":["https://openalex.org/I141945490"]},{"raw_affiliation_string":"the University of British Columbia, Canada","institution_ids":["https://openalex.org/I141945490"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5019914393"],"corresponding_institution_ids":["https://openalex.org/I141945490"],"apc_list":null,"apc_paid":null,"fwci":1.3727,"has_fulltext":false,"cited_by_count":8,"citation_normalized_percentile":{"value":0.82616186,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":96},"biblio":{"volume":"8316","issue":null,"first_page":"831612","last_page":"831612"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9891999959945679,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9891999959945679,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10727","display_name":"Ultrasound Imaging and Elastography","score":0.9865999817848206,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T14510","display_name":"Medical Imaging and Analysis","score":0.9850000143051147,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/image-registration","display_name":"Image registration","score":0.7449780702590942},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5853222012519836},{"id":"https://openalex.org/keywords/magnetic-resonance-imaging","display_name":"Magnetic resonance imaging","score":0.5781276822090149},{"id":"https://openalex.org/keywords/volume","display_name":"Volume (thermodynamics)","score":0.5508164167404175},{"id":"https://openalex.org/keywords/ground-truth","display_name":"Ground truth","score":0.5214325785636902},{"id":"https://openalex.org/keywords/prostate","display_name":"Prostate","score":0.46747538447380066},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.4231640100479126},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.38483721017837524},{"id":"https://openalex.org/keywords/biomedical-engineering","display_name":"Biomedical engineering","score":0.3442772328853607},{"id":"https://openalex.org/keywords/radiology","display_name":"Radiology","score":0.16817599534988403},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.1638241708278656},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.15994209051132202},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.12477123737335205}],"concepts":[{"id":"https://openalex.org/C166704113","wikidata":"https://www.wikidata.org/wiki/Q861092","display_name":"Image registration","level":3,"score":0.7449780702590942},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5853222012519836},{"id":"https://openalex.org/C143409427","wikidata":"https://www.wikidata.org/wiki/Q161238","display_name":"Magnetic resonance imaging","level":2,"score":0.5781276822090149},{"id":"https://openalex.org/C20556612","wikidata":"https://www.wikidata.org/wiki/Q4469374","display_name":"Volume (thermodynamics)","level":2,"score":0.5508164167404175},{"id":"https://openalex.org/C146849305","wikidata":"https://www.wikidata.org/wiki/Q370766","display_name":"Ground truth","level":2,"score":0.5214325785636902},{"id":"https://openalex.org/C2776235491","wikidata":"https://www.wikidata.org/wiki/Q9625","display_name":"Prostate","level":3,"score":0.46747538447380066},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.4231640100479126},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.38483721017837524},{"id":"https://openalex.org/C136229726","wikidata":"https://www.wikidata.org/wiki/Q327092","display_name":"Biomedical engineering","level":1,"score":0.3442772328853607},{"id":"https://openalex.org/C126838900","wikidata":"https://www.wikidata.org/wiki/Q77604","display_name":"Radiology","level":1,"score":0.16817599534988403},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.1638241708278656},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.15994209051132202},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.12477123737335205},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1117/12.911688","is_oa":false,"landing_page_url":"https://doi.org/10.1117/12.911688","pdf_url":null,"source":{"id":"https://openalex.org/S183492911","display_name":"Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE","issn_l":"0277-786X","issn":["0277-786X","1996-756X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310315543","host_organization_name":"SPIE","host_organization_lineage":["https://openalex.org/P4310315543"],"host_organization_lineage_names":["SPIE"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"SPIE Proceedings","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Good health and well-being","score":0.7599999904632568,"id":"https://metadata.un.org/sdg/3"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":19,"referenced_works":["https://openalex.org/W1857537545","https://openalex.org/W1981594234","https://openalex.org/W2008909990","https://openalex.org/W2013184309","https://openalex.org/W2023560768","https://openalex.org/W2026380252","https://openalex.org/W2040839781","https://openalex.org/W2045729961","https://openalex.org/W2052381478","https://openalex.org/W2057775191","https://openalex.org/W2089004929","https://openalex.org/W2098533585","https://openalex.org/W2104572044","https://openalex.org/W2107998312","https://openalex.org/W2109911863","https://openalex.org/W2111968429","https://openalex.org/W2119245945","https://openalex.org/W2139888244","https://openalex.org/W2151339743"],"related_works":["https://openalex.org/W4295532600","https://openalex.org/W2063823869","https://openalex.org/W2885323543","https://openalex.org/W3021493803","https://openalex.org/W2257755506","https://openalex.org/W2067569035","https://openalex.org/W2002934375","https://openalex.org/W2462603952","https://openalex.org/W2006468016","https://openalex.org/W4256129901"],"abstract_inverted_index":{"The":[0,51,216],"fusion":[1],"of":[2,11,25,91,168,183,197,204,213,221],"TransRectal":[3],"Ultrasound":[4],"(TRUS)":[5],"and":[6,17,47,57,94,124,186,206],"Magnetic":[7],"Resonance":[8],"(MR)":[9],"images":[10,126],"the":[12,26,72,88,92,95,101,105,109,137,141,144,155,171,187,190,194,198,211,219,222],"prostate":[13,21,27,118],"can":[14],"aid":[15],"diagnosis":[16],"treatment":[18],"planning":[19],"for":[20,65,127,143,151,237],"cancer.":[22],"Surface":[23],"segmentations":[24,46],"are":[28,111],"available":[29],"in":[30,136,140,174,218],"both":[31],"modalities.":[32],"Our":[33,227],"goal":[34],"is":[35,55,63,69,165,180,233],"to":[36,71,103,162,192],"develop":[37],"a":[38,48,58,83,131,166,181,202,207,234],"3D":[39],"deformable":[40,239],"registration":[41],"method":[42,232],"based":[43],"on":[44,117],"these":[45],"biomechanical":[49],"model.":[50],"segmented":[52],"source":[53,175,223],"volume":[54,68,75,106,169,172,184,220],"meshed":[56],"linear":[59],"finite":[60],"element":[61],"model":[62,102,132],"created":[64],"it.":[66],"This":[67,98],"deformed":[70],"target":[73],"image":[74],"by":[76,81],"applying":[77],"surface":[78,176,224,240],"forces":[79],"computed":[80],"assuming":[82],"negative":[84],"relative":[85],"pressure":[86,99],"between":[87,189,210],"non-overlapping":[89],"regions":[90],"volumes":[93],"overlapping":[96],"ones.":[97],"drives":[100],"increase":[104],"overlap":[107],"until":[108],"surfaces":[110,119],"aligned.":[112],"We":[113,146,200],"tested":[114],"our":[115,153],"algorithm":[116],"extracted":[120],"from":[121],"post-operative":[122],"MR":[123],"TRUS":[125],"14":[128],"patients,":[129],"using":[130],"with":[133],"elasticity":[134],"parameters":[135],"range":[138],"reported":[139],"literature":[142],"prostate.":[145],"used":[147],"three":[148],"evaluation":[149],"metrics":[150],"validating":[152],"technique:":[154],"Dice":[156],"Similarity":[157],"Coefficient":[158],"(DSC)":[159],"(ideally":[160],"equal":[161],"1.0),":[163],"which":[164,179],"measure":[167,182],"alignment,":[170],"change":[173,217],"during":[177],"registration,":[178],"preservation,":[185],"distance":[188,209],"urethras":[191,212],"assess":[193],"anatomical":[195],"correctness":[196],"method.":[199],"obtained":[201],"DSC":[203],"0.96&plusmn;0.02":[205],"mean":[208],"1.5&plusmn;1.4":[214],"mm.":[215],"was":[225],"1.5&plusmn;1.4%.":[226],"results":[228],"show":[229],"that":[230],"this":[231],"promising":[235],"tool":[236],"physicallybased":[238],"registration.":[241]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2018,"cited_by_count":2},{"year":2015,"cited_by_count":1},{"year":2013,"cited_by_count":2},{"year":2012,"cited_by_count":2}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
