{"id":"https://openalex.org/W4393899788","doi":"https://doi.org/10.1117/12.3023398","title":"Segmentation of human olfactory bulb glomeruli on its phase-contrast tomographic images with neural networks","display_name":"Segmentation of human olfactory bulb glomeruli on its phase-contrast tomographic images with neural networks","publication_year":2024,"publication_date":"2024-04-03","ids":{"openalex":"https://openalex.org/W4393899788","doi":"https://doi.org/10.1117/12.3023398"},"language":"en","primary_location":{"id":"doi:10.1117/12.3023398","is_oa":false,"landing_page_url":"http://dx.doi.org/10.1117/12.3023398","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Sixteenth International Conference on Machine Vision (ICMV 2023)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5057739530","display_name":"Aleksandr Smolin","orcid":"https://orcid.org/0000-0002-8319-6963"},"institutions":[{"id":"https://openalex.org/I153845743","display_name":"Moscow Institute of Physics and Technology","ror":"https://ror.org/00v0z9322","country_code":"RU","type":"education","lineage":["https://openalex.org/I153845743"]}],"countries":["RU"],"is_corresponding":true,"raw_author_name":"Aleksandr Smolin","raw_affiliation_strings":["Moscow Institute of Physics and Technology (Russian Federation)","Smart Engines Service LLC (Russian Federation)"],"affiliations":[{"raw_affiliation_string":"Moscow Institute of Physics and Technology (Russian Federation)","institution_ids":["https://openalex.org/I153845743"]},{"raw_affiliation_string":"Smart Engines Service LLC (Russian Federation)","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054182432","display_name":"Marina Chukalina","orcid":"https://orcid.org/0000-0002-1410-5175"},"institutions":[{"id":"https://openalex.org/I4210107660","display_name":"Institute for Information Transmission Problems","ror":"https://ror.org/013w2d378","country_code":"RU","type":"facility","lineage":["https://openalex.org/I4210107660"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Marina Chukalina","raw_affiliation_strings":["Institute for Information Transmission Problems (Russian Federation)","Smart Engines Service LLC (Russian Federation)"],"affiliations":[{"raw_affiliation_string":"Institute for Information Transmission Problems (Russian Federation)","institution_ids":["https://openalex.org/I4210107660"]},{"raw_affiliation_string":"Smart Engines Service LLC (Russian Federation)","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024670718","display_name":"Inna Bukreeva","orcid":"https://orcid.org/0000-0003-1483-4965"},"institutions":[{"id":"https://openalex.org/I118517470","display_name":"P.N. Lebedev Physical Institute of the Russian Academy of Sciences","ror":"https://ror.org/01jkd3546","country_code":"RU","type":"facility","lineage":["https://openalex.org/I118517470","https://openalex.org/I1313323035","https://openalex.org/I2800498218","https://openalex.org/I4210096333"]},{"id":"https://openalex.org/I4210091015","display_name":"Istituto di Nanotecnologia","ror":"https://ror.org/00bc51d88","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210091015","https://openalex.org/I4210155236"]}],"countries":["IT","RU"],"is_corresponding":false,"raw_author_name":"Inna Bukreeva","raw_affiliation_strings":["Institute of Nanotechnology, CNR (Italy)","P.N. Lebedev Physical Institute (Russian Federation)"],"affiliations":[{"raw_affiliation_string":"Institute of Nanotechnology, CNR (Italy)","institution_ids":["https://openalex.org/I4210091015"]},{"raw_affiliation_string":"P.N. Lebedev Physical Institute (Russian Federation)","institution_ids":["https://openalex.org/I118517470"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060874161","display_name":"Olga Junemann","orcid":"https://orcid.org/0000-0001-5828-5393"},"institutions":[{"id":"https://openalex.org/I4210091015","display_name":"Istituto di Nanotecnologia","ror":"https://ror.org/00bc51d88","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210091015","https://openalex.org/I4210155236"]},{"id":"https://openalex.org/I4210103380","display_name":"All-Russian Scientific Research Institute of Irrigation and Agricultural Water Supply \"Raduga\"","ror":"https://ror.org/01mp7gg57","country_code":"RU","type":"facility","lineage":["https://openalex.org/I4210103380"]}],"countries":["IT","RU"],"is_corresponding":false,"raw_author_name":"Olga Junemann","raw_affiliation_strings":["Federal State Budgetary Scientific Institution (Russian Federation)","Institute of Nanotechnology, CNR (Italy)"],"affiliations":[{"raw_affiliation_string":"Federal State Budgetary Scientific Institution (Russian Federation)","institution_ids":["https://openalex.org/I4210103380"]},{"raw_affiliation_string":"Institute of Nanotechnology, CNR (Italy)","institution_ids":["https://openalex.org/I4210091015"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065577501","display_name":"Alessia Cedola","orcid":"https://orcid.org/0000-0002-9256-8853"},"institutions":[{"id":"https://openalex.org/I4210091015","display_name":"Istituto di Nanotecnologia","ror":"https://ror.org/00bc51d88","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210091015","https://openalex.org/I4210155236"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Alessia Cedola","raw_affiliation_strings":["Institute of Nanotechnology, CNR (Italy)"],"affiliations":[{"raw_affiliation_string":"Institute of Nanotechnology, CNR (Italy)","institution_ids":["https://openalex.org/I4210091015"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064097409","display_name":"Michela Fratini","orcid":"https://orcid.org/0000-0003-3118-4335"},"institutions":[{"id":"https://openalex.org/I4210091015","display_name":"Istituto di Nanotecnologia","ror":"https://ror.org/00bc51d88","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210091015","https://openalex.org/I4210155236"]},{"id":"https://openalex.org/I4210150112","display_name":"Fondazione Santa Lucia","ror":"https://ror.org/05rcxtd95","country_code":"IT","type":"healthcare","lineage":["https://openalex.org/I4210150112","https://openalex.org/I4210153126"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Michela Fratini","raw_affiliation_strings":["IRCCS Santa Lucia Foundation (Italy)","Institute of Nanotechnology, CNR (Italy)"],"affiliations":[{"raw_affiliation_string":"IRCCS Santa Lucia Foundation (Italy)","institution_ids":["https://openalex.org/I4210150112"]},{"raw_affiliation_string":"Institute of Nanotechnology, CNR (Italy)","institution_ids":["https://openalex.org/I4210091015"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086860820","display_name":"S. V. Saveliev","orcid":"https://orcid.org/0000-0002-6595-5305"},"institutions":[{"id":"https://openalex.org/I4210103380","display_name":"All-Russian Scientific Research Institute of Irrigation and Agricultural Water Supply \"Raduga\"","ror":"https://ror.org/01mp7gg57","country_code":"RU","type":"facility","lineage":["https://openalex.org/I4210103380"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Sergei Saveliev","raw_affiliation_strings":["Federal State Budgetary Scientific Institution (Russian Federation)"],"affiliations":[{"raw_affiliation_string":"Federal State Budgetary Scientific Institution (Russian Federation)","institution_ids":["https://openalex.org/I4210103380"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5111161496","display_name":"Andrey Yamaev","orcid":null},"institutions":[{"id":"https://openalex.org/I19880235","display_name":"Lomonosov Moscow State University","ror":"https://ror.org/010pmpe69","country_code":"RU","type":"education","lineage":["https://openalex.org/I19880235"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Andrey Yamaev","raw_affiliation_strings":["Moscow State University (Russian Federation)","Smart Engines Service LLC (Russian Federation)"],"affiliations":[{"raw_affiliation_string":"Moscow State University (Russian Federation)","institution_ids":["https://openalex.org/I19880235"]},{"raw_affiliation_string":"Smart Engines Service LLC (Russian Federation)","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5057739530"],"corresponding_institution_ids":["https://openalex.org/I153845743"],"apc_list":null,"apc_paid":null,"fwci":0.6543,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.7829637,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":95},"biblio":{"volume":null,"issue":null,"first_page":"26","last_page":"26"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9934999942779541,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9934999942779541,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12015","display_name":"Photoacoustic and Ultrasonic Imaging","score":0.9914000034332275,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11569","display_name":"Optical Coherence Tomography Applications","score":0.9850999712944031,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/olfactory-bulb","display_name":"Olfactory bulb","score":0.8611948490142822},{"id":"https://openalex.org/keywords/overfitting","display_name":"Overfitting","score":0.8576744794845581},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.7250499725341797},{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.6958073377609253},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6862912178039551},{"id":"https://openalex.org/keywords/grayscale","display_name":"Grayscale","score":0.616409420967102},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.5574823021888733},{"id":"https://openalex.org/keywords/contrast","display_name":"Contrast (vision)","score":0.5273381471633911},{"id":"https://openalex.org/keywords/olfactory-system","display_name":"Olfactory system","score":0.5174903869628906},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.4438697099685669},{"id":"https://openalex.org/keywords/image-segmentation","display_name":"Image segmentation","score":0.420244038105011},{"id":"https://openalex.org/keywords/artificial-neural-network","display_name":"Artificial neural network","score":0.3588758111000061},{"id":"https://openalex.org/keywords/neuroscience","display_name":"Neuroscience","score":0.2888883352279663},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.28339582681655884},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.12227773666381836}],"concepts":[{"id":"https://openalex.org/C2780496858","wikidata":"https://www.wikidata.org/wiki/Q644945","display_name":"Olfactory bulb","level":3,"score":0.8611948490142822},{"id":"https://openalex.org/C22019652","wikidata":"https://www.wikidata.org/wiki/Q331309","display_name":"Overfitting","level":3,"score":0.8576744794845581},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.7250499725341797},{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.6958073377609253},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6862912178039551},{"id":"https://openalex.org/C78201319","wikidata":"https://www.wikidata.org/wiki/Q685727","display_name":"Grayscale","level":3,"score":0.616409420967102},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.5574823021888733},{"id":"https://openalex.org/C2776502983","wikidata":"https://www.wikidata.org/wiki/Q690182","display_name":"Contrast (vision)","level":2,"score":0.5273381471633911},{"id":"https://openalex.org/C201792869","wikidata":"https://www.wikidata.org/wiki/Q1054094","display_name":"Olfactory system","level":2,"score":0.5174903869628906},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.4438697099685669},{"id":"https://openalex.org/C124504099","wikidata":"https://www.wikidata.org/wiki/Q56933","display_name":"Image segmentation","level":3,"score":0.420244038105011},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.3588758111000061},{"id":"https://openalex.org/C169760540","wikidata":"https://www.wikidata.org/wiki/Q207011","display_name":"Neuroscience","level":1,"score":0.2888883352279663},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.28339582681655884},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.12227773666381836},{"id":"https://openalex.org/C529278444","wikidata":"https://www.wikidata.org/wiki/Q47273","display_name":"Central nervous system","level":2,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1117/12.3023398","is_oa":false,"landing_page_url":"http://dx.doi.org/10.1117/12.3023398","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Sixteenth International Conference on Machine Vision (ICMV 2023)","raw_type":"proceedings-article"},{"id":"pmh:oai:bib-pubdb1.desy.de:622221","is_oa":false,"landing_page_url":"https://bib-pubdb1.desy.de/record/622221","pdf_url":null,"source":{"id":"https://openalex.org/S4306400383","display_name":"DESY Publication Database (PUBDB) (Deutsches Elektronen-Synchrotron)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I2801876189","host_organization_name":"Deutsches Elektronen-Synchrotron DESY","host_organization_lineage":["https://openalex.org/I2801876189"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Sixteenth International Conference on Machine Vision (ICMV 2023) : [Proceedings] - SPIE, 2024. - ISBN 97815106746229781510674639 - doi:10.1117/12.3023398<br/>Sixteenth International Conference on Machine Vision , (ICMV 2023), Yerevan, Armenia, 2023-11-15 - 2023-11-18","raw_type":"info:eu-repo/semantics/publishedVersion"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":25,"referenced_works":["https://openalex.org/W1963483517","https://openalex.org/W2018044251","https://openalex.org/W2310992461","https://openalex.org/W2460515352","https://openalex.org/W2505463030","https://openalex.org/W2580596898","https://openalex.org/W2608353599","https://openalex.org/W2795587607","https://openalex.org/W3005273529","https://openalex.org/W3017466405","https://openalex.org/W3022434855","https://openalex.org/W3084798277","https://openalex.org/W3104370314","https://openalex.org/W3120330639","https://openalex.org/W4211052694","https://openalex.org/W4220982934","https://openalex.org/W4240990907","https://openalex.org/W4251370137","https://openalex.org/W4286462045","https://openalex.org/W4299829372","https://openalex.org/W4388968956","https://openalex.org/W6655134117","https://openalex.org/W6777473060","https://openalex.org/W6788022888","https://openalex.org/W6808157956"],"related_works":["https://openalex.org/W4231815232","https://openalex.org/W2060063624","https://openalex.org/W2378430301","https://openalex.org/W2020093956","https://openalex.org/W2009608443","https://openalex.org/W2045914711","https://openalex.org/W3160004761","https://openalex.org/W2072856858","https://openalex.org/W2072365414","https://openalex.org/W3032472908"],"abstract_inverted_index":{"The":[0,120],"human":[1,116],"olfactory":[2,40],"bulb":[3],"(OB),":[4],"an":[5],"important":[6],"part":[7],"of":[8,15,22,64,81,91,103,114,161],"the":[9,13,29,37,65,74,82,101,115,127,135,159,173],"brain":[10],"responsible":[11],"for":[12,35],"sense":[14],"smell,":[16],"is":[17,33,73,118,130],"a":[18,162],"complex":[19,139],"structure":[20,32,67],"composed":[21],"multiple":[23],"layers":[24],"and":[25,47,93,125,151],"cell":[26],"types.":[27],"Studying":[28],"OB":[30,104,117],"morphological":[31,66,105],"essential":[34],"understanding":[36],"decline":[38],"in":[39,53,111],"function":[41],"related":[42],"to":[43,60,88,95,99,122],"aging,":[44],"neurodegenerative":[45],"disorders,":[46],"other":[48],"pathologies.":[49],"Traditional":[50],"microscopy":[51],"methods":[52],"which":[54],"slices":[55],"are":[56,68,85],"stained":[57],"with":[58,167],"solutions":[59],"contrast":[61],"individual":[62],"elements":[63],"destructive.":[69],"Non-destructive":[70],"high-resolution":[71],"technique":[72],"X-ray":[75],"phase-contrast":[76],"tomography.":[77],"However,":[78],"manual":[79],"segmentation":[80,102],"reconstructed":[83],"images":[84,113,166],"time-consuming":[86],"due":[87],"large":[89],"amount":[90],"data":[92,141],"prone":[94],"errors.":[96],"U-Net-based":[97],"model":[98],"optimize":[100],"structures,":[106],"focusing":[107],"specifically":[108],"on":[109],"glomeruli,":[110],"tomographic":[112],"proposed.":[119],"strategy":[121],"address":[123],"overfitting":[124],"enhance":[126],"model's":[128],"accuracy":[129],"described.":[131],"This":[132],"method":[133],"addresses":[134],"challenges":[136],"posed":[137],"by":[138],"limited":[140],"containing":[142,165],"abundant":[143],"details,":[144],"similar":[145],"grayscale":[146],"levels":[147],"between":[148],"soft":[149],"tissues,":[150],"blurry":[152],"image":[153],"details.":[154],"Additionally,":[155],"it":[156],"successfully":[157],"overcomes":[158],"limitations":[160],"small":[163],"dataset":[164],"extremely":[168],"dense":[169],"point":[170],"clouds,":[171],"preventing":[172],"models":[174],"from":[175],"overfitting.":[176]},"counts_by_year":[{"year":2025,"cited_by_count":1}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}
