{"id":"https://openalex.org/W4213246706","doi":"https://doi.org/10.1117/12.2608597","title":"SciKit-SurgeryGlenoid, an open source toolkit for glenoid version measurement","display_name":"SciKit-SurgeryGlenoid, an open source toolkit for glenoid version measurement","publication_year":2022,"publication_date":"2022-02-18","ids":{"openalex":"https://openalex.org/W4213246706","doi":"https://doi.org/10.1117/12.2608597","pmid":"https://pubmed.ncbi.nlm.nih.gov/37767103"},"language":"en","primary_location":{"id":"doi:10.1117/12.2608597","is_oa":false,"landing_page_url":"https://doi.org/10.1117/12.2608597","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Medical Imaging 2022: Image-Guided Procedures, Robotic Interventions, and Modeling","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7615128","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5090067012","display_name":"Asta Olafsdottir","orcid":null},"institutions":[{"id":"https://openalex.org/I45129253","display_name":"University College London","ror":"https://ror.org/02jx3x895","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I45129253"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Asta Olafsdottir","raw_affiliation_strings":["Wellcome/EPSRC Centre for Interventional and Surgical Science, University College London, United Kingdom","Univ. College London (United Kingdom)"],"affiliations":[{"raw_affiliation_string":"Wellcome/EPSRC Centre for Interventional and Surgical Science, University College London, United Kingdom","institution_ids":[]},{"raw_affiliation_string":"Univ. College London (United Kingdom)","institution_ids":["https://openalex.org/I45129253"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009150298","display_name":"David Butt","orcid":"https://orcid.org/0000-0002-5708-9160"},"institutions":[{"id":"https://openalex.org/I4210118734","display_name":"Royal National Orthopaedic Hospital NHS Trust","ror":"https://ror.org/03dx46b94","country_code":"GB","type":"healthcare","lineage":["https://openalex.org/I4210118734"]},{"id":"https://openalex.org/I45129253","display_name":"University College London","ror":"https://ror.org/02jx3x895","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I45129253"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"David Butt","raw_affiliation_strings":["The Royal National Orthopaedic Hospital NHS Trust","The Royal National Orthopaedic Hospital NHS Trust (United Kingdom)"],"affiliations":[{"raw_affiliation_string":"The Royal National Orthopaedic Hospital NHS Trust","institution_ids":["https://openalex.org/I45129253","https://openalex.org/I4210118734"]},{"raw_affiliation_string":"The Royal National Orthopaedic Hospital NHS Trust (United Kingdom)","institution_ids":["https://openalex.org/I45129253","https://openalex.org/I4210118734"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113559856","display_name":"Addie Majed","orcid":null},"institutions":[{"id":"https://openalex.org/I45129253","display_name":"University College London","ror":"https://ror.org/02jx3x895","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I45129253"]},{"id":"https://openalex.org/I4210118734","display_name":"Royal National Orthopaedic Hospital NHS Trust","ror":"https://ror.org/03dx46b94","country_code":"GB","type":"healthcare","lineage":["https://openalex.org/I4210118734"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Addie Majed","raw_affiliation_strings":["The Royal National Orthopaedic Hospital NHS Trust","The Royal National Orthopaedic Hospital NHS Trust (United Kingdom)"],"affiliations":[{"raw_affiliation_string":"The Royal National Orthopaedic Hospital NHS Trust","institution_ids":["https://openalex.org/I45129253","https://openalex.org/I4210118734"]},{"raw_affiliation_string":"The Royal National Orthopaedic Hospital NHS Trust (United Kingdom)","institution_ids":["https://openalex.org/I45129253","https://openalex.org/I4210118734"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017919599","display_name":"Mark Falworth","orcid":null},"institutions":[{"id":"https://openalex.org/I45129253","display_name":"University College London","ror":"https://ror.org/02jx3x895","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I45129253"]},{"id":"https://openalex.org/I4210118734","display_name":"Royal National Orthopaedic Hospital NHS Trust","ror":"https://ror.org/03dx46b94","country_code":"GB","type":"healthcare","lineage":["https://openalex.org/I4210118734"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Mark Falworth","raw_affiliation_strings":["The Royal National Orthopaedic Hospital NHS Trust","The Royal National Orthopaedic Hospital NHS Trust (United Kingdom)"],"affiliations":[{"raw_affiliation_string":"The Royal National Orthopaedic Hospital NHS Trust","institution_ids":["https://openalex.org/I45129253","https://openalex.org/I4210118734"]},{"raw_affiliation_string":"The Royal National Orthopaedic Hospital NHS Trust (United Kingdom)","institution_ids":["https://openalex.org/I45129253","https://openalex.org/I4210118734"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001311980","display_name":"Matthew J. Clarkson","orcid":"https://orcid.org/0000-0002-5565-1252"},"institutions":[{"id":"https://openalex.org/I45129253","display_name":"University College London","ror":"https://ror.org/02jx3x895","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I45129253"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Matthew J. Clarkson","raw_affiliation_strings":["Wellcome/EPSRC Centre for Interventional and Surgical Science, University College London, United Kingdom","Univ. College London (United Kingdom)"],"affiliations":[{"raw_affiliation_string":"Wellcome/EPSRC Centre for Interventional and Surgical Science, University College London, United Kingdom","institution_ids":[]},{"raw_affiliation_string":"Univ. College London (United Kingdom)","institution_ids":["https://openalex.org/I45129253"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5009863636","display_name":"Stephen Thompson","orcid":"https://orcid.org/0000-0001-7286-1326"},"institutions":[{"id":"https://openalex.org/I45129253","display_name":"University College London","ror":"https://ror.org/02jx3x895","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I45129253"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Stephen A. Thompson","raw_affiliation_strings":["Wellcome/EPSRC Centre for Interventional and Surgical Science, University College London, United Kingdom","Univ. College London (United Kingdom)"],"affiliations":[{"raw_affiliation_string":"Wellcome/EPSRC Centre for Interventional and Surgical Science, University College London, United Kingdom","institution_ids":[]},{"raw_affiliation_string":"Univ. College London (United Kingdom)","institution_ids":["https://openalex.org/I45129253"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5090067012"],"corresponding_institution_ids":["https://openalex.org/I45129253"],"apc_list":null,"apc_paid":null,"fwci":0.2179,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.49190311,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"74","issue":null,"first_page":"58","last_page":"58"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10280","display_name":"Shoulder Injury and Treatment","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/2746","display_name":"Surgery"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10280","display_name":"Shoulder Injury and Treatment","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/2746","display_name":"Surgery"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12411","display_name":"Shoulder and Clavicle Injuries","score":0.998199999332428,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10172","display_name":"Cardiac Valve Diseases and Treatments","score":0.9943000078201294,"subfield":{"id":"https://openalex.org/subfields/2705","display_name":"Cardiology and Cardiovascular Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5544264316558838},{"id":"https://openalex.org/keywords/scapula","display_name":"Scapula","score":0.5397295951843262},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.5162749290466309},{"id":"https://openalex.org/keywords/joint-replacement","display_name":"Joint replacement","score":0.4457835257053375},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3356174826622009},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.17985105514526367},{"id":"https://openalex.org/keywords/arthroplasty","display_name":"Arthroplasty","score":0.1619960367679596},{"id":"https://openalex.org/keywords/radiology","display_name":"Radiology","score":0.09373107552528381},{"id":"https://openalex.org/keywords/surgery","display_name":"Surgery","score":0.08673813939094543}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5544264316558838},{"id":"https://openalex.org/C2779777117","wikidata":"https://www.wikidata.org/wiki/Q16336","display_name":"Scapula","level":2,"score":0.5397295951843262},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.5162749290466309},{"id":"https://openalex.org/C2777417762","wikidata":"https://www.wikidata.org/wiki/Q1863402","display_name":"Joint replacement","level":3,"score":0.4457835257053375},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3356174826622009},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.17985105514526367},{"id":"https://openalex.org/C2778336525","wikidata":"https://www.wikidata.org/wiki/Q708178","display_name":"Arthroplasty","level":2,"score":0.1619960367679596},{"id":"https://openalex.org/C126838900","wikidata":"https://www.wikidata.org/wiki/Q77604","display_name":"Radiology","level":1,"score":0.09373107552528381},{"id":"https://openalex.org/C141071460","wikidata":"https://www.wikidata.org/wiki/Q40821","display_name":"Surgery","level":1,"score":0.08673813939094543},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1117/12.2608597","is_oa":false,"landing_page_url":"https://doi.org/10.1117/12.2608597","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Medical Imaging 2022: Image-Guided Procedures, Robotic Interventions, and Modeling","raw_type":"proceedings-article"},{"id":"pmid:37767103","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37767103","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of SPIE--the International Society for Optical Engineering","raw_type":null},{"id":"pmh:oai:eprints.ucl.ac.uk.OAI2:10136649","is_oa":false,"landing_page_url":"https://discovery.ucl.ac.uk/id/eprint/10136649/","pdf_url":null,"source":{"id":"https://openalex.org/S4306400024","display_name":"UCL Discovery (University College London)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I45129253","host_organization_name":"University College London","host_organization_lineage":["https://openalex.org/I45129253"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"     In: Linte, CA and Siewerdsen, JH, (eds.) Medical Imaging 2022: Image-Guided Procedures, Robotic Interventions, and Modeling.    SPIE: San Diego, CA, USA. (2022)     ","raw_type":"Proceedings paper"},{"id":"pmh:oai:pubmedcentral.nih.gov:7615128","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7615128","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Proc SPIE Int Soc Opt Eng","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:7615128","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7615128","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Proc SPIE Int Soc Opt Eng","raw_type":"Text"},"sustainable_development_goals":[{"score":0.4300000071525574,"id":"https://metadata.un.org/sdg/9","display_name":"Industry, innovation and infrastructure"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":30,"referenced_works":["https://openalex.org/W78661028","https://openalex.org/W1551643567","https://openalex.org/W1984465135","https://openalex.org/W2016356754","https://openalex.org/W2080209944","https://openalex.org/W2097519616","https://openalex.org/W2107707456","https://openalex.org/W2124868592","https://openalex.org/W2139491204","https://openalex.org/W2260665632","https://openalex.org/W2781745366","https://openalex.org/W2807040482","https://openalex.org/W2911799193","https://openalex.org/W3014998211","https://openalex.org/W3027545142","https://openalex.org/W3035965352","https://openalex.org/W3048453852","https://openalex.org/W3080099010","https://openalex.org/W3097464447","https://openalex.org/W3097966505","https://openalex.org/W3099878876","https://openalex.org/W3102172316","https://openalex.org/W3130395709","https://openalex.org/W3159212638","https://openalex.org/W3186273142","https://openalex.org/W4213246706","https://openalex.org/W4288076474","https://openalex.org/W6692839128","https://openalex.org/W6723177096","https://openalex.org/W6893850830"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2748952813","https://openalex.org/W2087860414","https://openalex.org/W1516154450","https://openalex.org/W2998292048","https://openalex.org/W1518158892","https://openalex.org/W4393021683","https://openalex.org/W4386736424","https://openalex.org/W2078881900","https://openalex.org/W2058948826"],"abstract_inverted_index":{"Correct":[0],"understanding":[1],"of":[2,5,10,19,51,60,103,109,124,132,139,172],"the":[3,6,11,31,43,48,52,57,61,64,69,82,101,110,125,130,134,173,186],"geometry":[4,41],"glenoid":[7,44,53,70,104,115,202],"(the":[8],"socket":[9],"shoulder":[12,20,32,150],"joint)":[13],"is":[14,42,47,72],"key":[15],"to":[16,34,56,189,200],"successful":[17],"planning":[18,88,165],"replacement":[21,151],"surgery.":[22,152],"This":[23],"surgery":[24],"typically":[25],"involves":[26],"placing":[27],"an":[28,96,191],"implant":[29,164],"in":[30,63,81,86],"joint":[33,36],"restore":[35],"function.":[37],"The":[38],"most":[39,112],"relevant":[40,174],"version,":[45],"which":[46],"angular":[49],"orientation":[50],"surface":[54],"relative":[55],"long":[58],"axis":[59],"scapula":[62],"axial":[65],"plane.":[66],"However,":[67],"measuring":[68],"version":[71,116,203],"not":[73],"straightforward":[74],"and":[75,84,121,193],"there":[76],"are":[77],"multiple":[78],"measurement":[79,102,117],"methods":[80],"literature":[83],"used":[85,114],"commercial":[87,163],"software.":[89,166],"In":[90],"this":[91],"paper":[92],"we":[93],"introduce":[94],"SciKit-SurgeryGlenoid,":[95],"open":[97],"source":[98],"toolkit":[99],"for":[100,177],"version.":[105],"SciKit-SurgeryGlenoid":[106,167],"contains":[107],"implementations":[108],"4":[111],"frequently":[113],"algorithms":[118],"enabling":[119],"easy":[120],"unbiased":[122],"comparison":[123],"different":[126],"techniques.":[127],"We":[128,153],"present":[129],"results":[131,157],"using":[133],"software":[135],"on":[136],"10":[137],"sets":[138],"pre-operative":[140],"CT":[141,197],"scans":[142],"taken":[143],"from":[144,161,196],"patients":[145],"who":[146],"have":[147],"subsequently":[148],"undergone":[149],"further":[154],"compare":[155],"these":[156],"with":[158],"those":[159],"obtained":[160],"a":[162],"currently":[168],"requires":[169],"manual":[170],"segmentation":[171,187],"anatomical":[175],"features":[176],"each":[178],"method.":[179],"Future":[180],"work":[181],"will":[182],"look":[183],"at":[184],"automating":[185],"process":[188],"build":[190],"automatic":[192],"repeatable":[194],"pipeline":[195],"or":[198],"radiograph":[199],"quantitative":[201],"measurement.":[204]},"counts_by_year":[{"year":2022,"cited_by_count":1}],"updated_date":"2026-04-21T08:09:41.155169","created_date":"2025-10-10T00:00:00"}
