{"id":"https://openalex.org/W4223903727","doi":"https://doi.org/10.1117/12.2606365","title":"Procedural generation of synthetic multiplex immunohistochemistry images using cell-based image compression and conditional generative adversarial networks","display_name":"Procedural generation of synthetic multiplex immunohistochemistry images using cell-based image compression and conditional generative adversarial networks","publication_year":2022,"publication_date":"2022-04-04","ids":{"openalex":"https://openalex.org/W4223903727","doi":"https://doi.org/10.1117/12.2606365"},"language":"en","primary_location":{"id":"doi:10.1117/12.2606365","is_oa":false,"landing_page_url":"https://doi.org/10.1117/12.2606365","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Medical Imaging 2022: Digital and Computational Pathology","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5060480108","display_name":"Laurin Herbsthofer","orcid":"https://orcid.org/0000-0002-7946-9754"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Laurin Herbsthofer","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056279081","display_name":"Barbara Ehall","orcid":"https://orcid.org/0000-0001-6748-8184"},"institutions":[{"id":"https://openalex.org/I202276237","display_name":"Medical University of Graz","ror":"https://ror.org/02n0bts35","country_code":"AT","type":"education","lineage":["https://openalex.org/I202276237"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Barbara Ehall","raw_affiliation_strings":["BioTechMed (Austria)","Medical Univ. of Graz (Austria)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BioTechMed (Austria)","institution_ids":[]},{"raw_affiliation_string":"Medical Univ. of Graz (Austria)","institution_ids":["https://openalex.org/I202276237"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086003470","display_name":"Martina Tomberger","orcid":null},"institutions":[{"id":"https://openalex.org/I4210128031","display_name":"Center For Biomarker Research In Medicine","ror":"https://ror.org/031gwf224","country_code":"AT","type":"nonprofit","lineage":["https://openalex.org/I4210128031"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Martina Tomberger","raw_affiliation_strings":["Ctr. for Biomarker Research in Medicine GmbH (Austria)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Ctr. for Biomarker Research in Medicine GmbH (Austria)","institution_ids":["https://openalex.org/I4210128031"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074264567","display_name":"Barbara Prietl","orcid":"https://orcid.org/0000-0001-6136-2804"},"institutions":[{"id":"https://openalex.org/I202276237","display_name":"Medical University of Graz","ror":"https://ror.org/02n0bts35","country_code":"AT","type":"education","lineage":["https://openalex.org/I202276237"]},{"id":"https://openalex.org/I4210128031","display_name":"Center For Biomarker Research In Medicine","ror":"https://ror.org/031gwf224","country_code":"AT","type":"nonprofit","lineage":["https://openalex.org/I4210128031"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Barbara Prietl","raw_affiliation_strings":["Ctr. for Biomarker Research in Medicine GmbH (Austria)","Medical Univ. of Graz (Austria)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Ctr. for Biomarker Research in Medicine GmbH (Austria)","institution_ids":["https://openalex.org/I4210128031"]},{"raw_affiliation_string":"Medical Univ. of Graz (Austria)","institution_ids":["https://openalex.org/I202276237"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023877066","display_name":"Thomas R. Pieber","orcid":"https://orcid.org/0000-0003-3554-0405"},"institutions":[{"id":"https://openalex.org/I202276237","display_name":"Medical University of Graz","ror":"https://ror.org/02n0bts35","country_code":"AT","type":"education","lineage":["https://openalex.org/I202276237"]},{"id":"https://openalex.org/I4210128031","display_name":"Center For Biomarker Research In Medicine","ror":"https://ror.org/031gwf224","country_code":"AT","type":"nonprofit","lineage":["https://openalex.org/I4210128031"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Thomas R. Pieber","raw_affiliation_strings":["Ctr. for Biomarker Research in Medicine GmbH (Austria)","Medical Univ. of Graz (Austria)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Ctr. for Biomarker Research in Medicine GmbH (Austria)","institution_ids":["https://openalex.org/I4210128031"]},{"raw_affiliation_string":"Medical Univ. of Graz (Austria)","institution_ids":["https://openalex.org/I202276237"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5091381316","display_name":"Pablo L\u00f3pez-Garc\u00eda","orcid":"https://orcid.org/0000-0001-5419-7337"},"institutions":[{"id":"https://openalex.org/I4210128031","display_name":"Center For Biomarker Research In Medicine","ror":"https://ror.org/031gwf224","country_code":"AT","type":"nonprofit","lineage":["https://openalex.org/I4210128031"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Pablo L\u00f3pez-Garc\u00eda","raw_affiliation_strings":["Ctr. for Biomarker Research in Medicine GmbH (Austria)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Ctr. for Biomarker Research in Medicine GmbH (Austria)","institution_ids":["https://openalex.org/I4210128031"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.3374,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.51260845,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":null,"issue":null,"first_page":"25","last_page":"25"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.9970999956130981,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.9970999956130981,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9898999929428101,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10775","display_name":"Generative Adversarial Networks and Image Synthesis","score":0.989799976348877,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.7533206343650818},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7497082948684692},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.5366347432136536},{"id":"https://openalex.org/keywords/pixel","display_name":"Pixel","score":0.5119680166244507},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.5034951567649841},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.4712657928466797},{"id":"https://openalex.org/keywords/multiplex","display_name":"Multiplex","score":0.46867260336875916},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.1745263636112213},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.10305973887443542}],"concepts":[{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.7533206343650818},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7497082948684692},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.5366347432136536},{"id":"https://openalex.org/C160633673","wikidata":"https://www.wikidata.org/wiki/Q355198","display_name":"Pixel","level":2,"score":0.5119680166244507},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.5034951567649841},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.4712657928466797},{"id":"https://openalex.org/C2781188995","wikidata":"https://www.wikidata.org/wiki/Q6934982","display_name":"Multiplex","level":2,"score":0.46867260336875916},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.1745263636112213},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.10305973887443542}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1117/12.2606365","is_oa":false,"landing_page_url":"https://doi.org/10.1117/12.2606365","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Medical Imaging 2022: Digital and Computational Pathology","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":14,"referenced_works":["https://openalex.org/W2108598243","https://openalex.org/W2282821441","https://openalex.org/W2531409750","https://openalex.org/W2802704833","https://openalex.org/W2963073614","https://openalex.org/W3083976124","https://openalex.org/W3164133896","https://openalex.org/W4200409436","https://openalex.org/W4287726546","https://openalex.org/W4296580612","https://openalex.org/W6729966448","https://openalex.org/W6763148875","https://openalex.org/W6765185571","https://openalex.org/W6779893143"],"related_works":["https://openalex.org/W3006199032","https://openalex.org/W1963826946","https://openalex.org/W2087421209","https://openalex.org/W2547948671","https://openalex.org/W2085033728","https://openalex.org/W4285411112","https://openalex.org/W4281783318","https://openalex.org/W2023853334","https://openalex.org/W2171299904","https://openalex.org/W2001010891"],"abstract_inverted_index":{"Collecting":[0],"substantial":[1],"amounts":[2],"of":[3,23,68,114,126,135,175,182,185,235],"tissue":[4,128,140,222],"image":[5,27,211,227,236],"data":[6,18],"is":[7,87],"expensive,":[8],"time":[9],"consuming":[10],"and":[11,29,35,58,142,203,226,230],"often":[12],"restricted":[13],"by":[14,89],"sample":[15,201],"availability.":[16],"This":[17],"sparsity":[19],"limits":[20],"the":[21,112,124,132,156,194,205,233],"use":[22],"neural":[24],"networks":[25],"for":[26,32,111,123,147,193],"classification":[28,237],"knowledge":[30],"extraction":[31],"many":[33],"medical":[34],"biological":[36],"applications.":[37],"In":[38,102,150],"this":[39,100],"work,":[40],"we":[41,72,106,154,170],"present":[42],"a":[43,59,78,96,103,108,151,168],"novel":[44],"method":[45,66,81,217],"to":[46,98,159],"procedurally":[47],"generate":[48],"synthetic":[49,115,161,172],"fluorescent":[50],"multiplex":[51],"immunohistochemistry":[52],"(fm-IHC)":[53],"images":[54,76,163,174,202],"using":[55,77,197],"human-defined":[56],"rules":[57,122,192],"conditional":[60],"Generative":[61],"Adversarial":[62],"Network":[63],"(cGAN).":[64],"Our":[65],"consists":[67],"three":[69],"steps:":[70],"First,":[71],"compress":[73],"high-resolution":[74],"fm-IHC":[75,165,173,210],"cell-based":[79],"compression":[80],"(Cell2Grid)":[82],"in":[83,138,179],"which":[84],"every":[85],"cell":[86,136,224],"represented":[88],"just":[90],"one":[91],"pixel.":[92],"We":[93,118,190,213],"subsequently":[94],"train":[95],"cGAN":[97,158,206],"reverse":[99],"compression.":[101],"second":[104],"step,":[105,153],"define":[107,121,131,144],"procedural":[109,195],"algorithm":[110,196],"generation":[113,125],"Cell2Grid":[116,162],"images.":[117,166],"therefore":[119],"(1)":[120],"large-scale":[127],"morphology,":[129,223],"(2)":[130],"relative":[133],"abundance":[134],"phenotypes":[137],"each":[139,148],"segment,":[141],"(3)":[143],"marker":[145],"distributions":[146],"phenotype.":[149],"third":[152],"apply":[155],"trained":[157,204],"convert":[160],"into":[164],"As":[167],"showcase,":[169],"generated":[171],"murine":[176],"pancreatic":[177],"islets":[178],"different":[180],"stages":[181],"insulitis":[183],"consisting":[184],"seven":[186],"antibody":[187],"color":[188],"channels.":[189],"derived":[191],"only":[198],"59":[199],"real":[200],"on":[207],"1,575":[208],"unlabeled":[209],"crops.":[212],"show":[214],"that":[215],"our":[216],"provides":[218],"full":[219],"control":[220],"over":[221],"composition,":[225],"ground":[228],"truth":[229],"can":[231],"support":[232],"training":[234],"networks.":[238]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":1}],"updated_date":"2026-07-29T14:22:42.915294","created_date":"2025-10-10T00:00:00"}
